Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->AGP1                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                  --------->MYB52(1)                                                                                  <-----------GT1                                   <---------YAB1                              <---------ICU4                                   <---------TOE2(3)                           --------->YAB1                           --------->ARR11(3)                                 <---------YAB1                           <---------ARR11(3)                               --------->YAB1                         --------->AHL20(1)                                ----------->GT1                         <---------ARR11(3)                            --------->AHL20(1)                         --------->ARR11(3)                            <---------AHL20(2)           <-----------GT1<---------CCA1(2)                            <---------AHL20(1) ---------->AtSPL8    --------->AHL20(2)                               --------->AHL20(2) -----------AtSPL8  --------->AHL20(2)            ----------->GT1     --------->AHL20(2) ->DOF2 <----------DOF2  <---------AHL20(1)  ---------->DOF2          <---------AHL20(2)<------ZmHOX2a(2)   tgtactaactcttttacttcataaaaatatatctattaagataagtagaaagtggataaattccaattcaaaataaattgataataaccgatctacatat  21638600                                                          <---------------AtSPL3                                                 <---------------AGL15                                               <---------AHL20(2)                                              <---------YAB1    ----------->GT1        ------->TEIL                                    ----------->GT1     --------->YAB1             --------------->AtSPL3                                 --------->GLK1(2)  <---------YAB1            --------->YAB1        --------->AHL20(2)       --------->ARR14(2)--------->AHL20(2)      <---------GLK1(1)       <-        <---------AHL20(2)       <---------ARR14(2)<---------AHL20(2)      --------->GLK1(1)       <-     <----------DOF2 <---------At4g35610   --------->ICU4 <---------------AtSPL8   --------------->AtSPL8   atgttttcttttaattccatttcatctcattagcgaatatgtgaaatttttattttaatagtagtactgtataatggaaatcagaaacgtacttgtttct  21638700                      ------>ZmHOX2a(1)                   <------ZmHOX2a(2)                   ============================HOX2a_HOX2a                  <---------ARR14(2)                  --------->ARR14(2)           ------>ZmHOX2a(2)           ==================HOX2a_HOX2a           ====================================HOX2a_HOX2a          =====================================HOX2a_HOX2a          <---------GLK1(1)          <------ZmHOX2a(2)          ===================HOX2a_HOX2a          --------->GLK1(1)         <---------ARR11(3)         <---------ARR14(2)             <------ZmHOX2a(1)         <-----------ARR10            --------->ANAC58         --------->ARR11(3)           --------->ANAC58         --------->ARR14(2)        ------->GAMYB                                                   <-         <---------AGP1           --------->ANAC58                                               <---      <---------TOE2(3)    ---------->DOF2                                                       ---- --------DAG2  <---------At4g35610--------->ANAC58              --------->YAB1                  ----- ---------DOF2 --------->At4g35610--------->ANAC46   ---------->DOF2      <-----------GT1 ---------->DOF2   cctttatcaaggatctcagcgatcctcccaaatgcaacgcaaggacaaacccatgtaaagcagccttcataacaatttacaaacaaaaccaaaaaagaat  21638800                         ------>ZmHOX2a(1)                        --------->TOE1(3)                        --------->TOE2(3)                                        <---------ARR11(3)                     <-----------GT1                                            <---------GLK1(1)                --------->AHL20(2)                                              --------->GLK1(1)                <---------AHL20(2)                                              <---------CCA1(1)            ====================HOX2a_HOX2a                                     <---------RVE1(1)            ------>ZmHOX2a(2)                                    --------->ATHB51--------->ARR11(3)          --------->ARR14(2)                                    <---------AHL20(2)          <---------ARR14(2)                                    --------->ICU4  --------->RVE1(1)          <---------ARR11(3)                        ----------->GT1          <---------ZAT6 --------YAB1<----------DOF2                       --------->DAG2<---------ICU4<---------ARR11(3) ------ICU4=====================HOX2a_HOX2a       ---------->DOF2-------->ATHB1--------->ARR11(3) ----->YAB1<------ZmHOX2a(2)                   --------->YAB1   --------->AHL20(2)                --- ---->ICU4--------->ARR11(3)            ---------->DOF2         <---------ATHB51--------->CCA1(1) <--   tatgactaaaccgatcttttaattttccttaaacttgtgtaagaaagaattataaagttaaatgaaattattacatgtagagatatcttcagagagacag  21638900         <---------MYB52(1)                <---------ICU4 -------->GT1                   <----------DOF2                                                  <--- -------ANAC46              <---------MYB52(1)<-----------GT1     <---------AHL20(2)  --------->MYB52(1)   tcgtataaaccggtagtccattgcccttcagttactttcttctcatttttgccttcttgttcggacatttttttttttggtgaagagataactgattcaa  21639000                                                            <---------AHL20(1)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                   <---------AHL20(2)                                              <---------AHL20(2)      <------MYB83                                <---------------AGL15    --------->AHL20(1)                  --------->MYB52(2)          --------->AHL20(2)      <------MYB46(1)                  <---------MYB46(3)         --------->AHL20(2)      --------->MYB59                <---------MYB52(1)<-----------TBP  --------->AHL20(2)<---------AtMYB61            <---------ARR11(3)  --------------->AGL15   --------->AHL20(2)            --------->ARR11(3) ----------------->AGL3   <---------AHL20(2)     <---------ANAC46          <-----------------AGL2  <---------AHL20(1)                           <  <---------AtMYB61            <-----------------AGL3  <---------AHL20(2)               --------->WRKY38(1) ---------CBF ------>ZmHOX2a(2)----------------->AGL2  --------->AHL20(2)        <---------YAB1    --   attggtggtgtttagatcgtttgttatactctaactatatatagctatttaatttaaattattttatttgtttggtctgcattttgaatgttgactccaa  21639100                                        <---------AHL20(2)                                       <---------AHL20(2)                                       --------->AHL20(2)                              --------->YAB1                      --------->ANAC55(2)             <--             <---------AHL20(2)   ------------>CBF                <---------ANAC55(2)            ----         <---------AHL20(2)   --------->AHL20(2)              <-----------HVH21                  ---- ---------AHL20(2)           ----------->TBP              <---------ANAC46                      ----- ------->AHL20(2)        ------------>CBF              --------->bZIP60(2)---------->DOF2  <---------   attttatacatatattttcttactggtcacaataaaaacaattaaatagagaatgcaacgtcgtggtcacttgttcaaaaggagaagactgttctttcca  21639200                                                                         <---------ARR11(3)                                    <------------CBF                --------->ALFIN1                                   -------->ATHB1                 <------MYB83                                   <---------AHL20(2)             <---------ANAC55(1)                                   -------->HAHB4                 <---------ANAC58                                   --------->ATHB12               <---------ANAC58                                   --------->ATHB51               <------MYB46(1)                                  <---------ATHB51                <---------ANAC46                                  <---------YAB1                 --------->MYB52(2)                               <---------AHL20(2)                --------->MYB111(1)                         <---------AHL20(2)                      --------->MYB59          <---------ARR11(3)  --------->AHL20(2)                 --------->MYB111(2)        <--------          --------->GLK1(2)   <---------AHL20(1)                <---------MYB55(1)          <--------          <-----------ARR10   --------->AHL20(1)               <<<<<<<<<MYB98         <---------ARR11(3) ---------HVH21         --------->YAB1        <---------YAB1   <---------MYB52(1)     --------->ARR14(2) ----->ANAC46        --------->YAB1<---------ICU4        <---------GLK1(2)       <-----------GT1 ----->bZIP60(2)  <----------DOF2 --------->ICU4         --------->ARR11(3)     <-----------GT1    -- ---->LBD16   <---------CCA1(2)--------->AHL20(2)   <----------DOF2 <---------REM1(1) --------->ARR11(3) -DOF2    --------->ARR11(3)  <---------AHL20(2)<---------GLK1(2)--------->MYB46(2)   <---------ARR14(2)   ggtcatttcaaaaatcttatcttttataaaaatttaattattgtttttctgattctttagattttgttaggtgtagatgtttttaacagatattgcttca  21639300                                               ---------->DOF2                               --------->AHL20(2)  --------->ARR11(3)                               --------->AHL20(1)  --------->ARR14(2)                               <---------AHL20(1)  <---------ARR11(3)                               <---------AHL20(2)  <---------GLK1(2)   ---------->DOF2 <---------ATHB12 <-----------GT1<---------ARR14(2) -ANAC58          ------>MYB46(1)  --------->AHL20(2)       --------->AHL20(2)                      < -ANAC58----------->GT1   <---------ATHB12--------->At4g35610<---------AHL20(2)      <---------TOE2(3) ------->TOE2(3)  ------>MYB83--------->AHL20(2) ----------->ARR10       <-----------GT1 <---------REM1(1)   aacttaaaagaagtaaaaccaatcgacaatgaataaattaactaagctaaaaagatactccattttatagacgtttcacatttcataaacgttgtaggga  21639400                                                                      ---------->DOF2                                               ------>MYB46(1)    ----------->HVH21                                               --------->MYB52(1) --------->WRKY12                                               ------>MYB83     <-------GAMYB                                              --------->MYB55(1)<---------At4g35610                                          <-----------GT1      <---------ANAC46                                   <---------ARR11(3)     <---------ANAC58   --------->At5g28300           ---------->DOF2       --------->ANAC58         <---------ANAC58  ----------->GT1        --   <---------TOE2(3)             --------->ANAC58--------->ANAC58 --------->WRKY38(1)             --- ------ZmHOX2a(2)                --------->ANAC46--------->ANAC58<---------MYB52(1)         <--------   cgatcaaggtttggaaagggcttcaaaatgtctccaagacattttaaccaaacggaaatagcttgccgttgacaaagacggtaaaaagattacataggtt  21639500  Previous    Next  AGI:  At1g58320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35525.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42113.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 21637788    to: 21638968    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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