Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ARR14(2)                                                   <-----------RAV1(2)  --------->At4g35610                                                   ===================RAV --------->DEAR3(1)                                           --------->YAB1               --------->LBD16  <---------ARR11(3)            ---------->DOF2               <---------YAB1                ------>NtERF2    <-----------ARR10     ------------------------>ANAC81    --------->ATHB12              --------->MYB46(3) <---------ARR14(2) <---------------AGL15                  -------->HAHB4                <---------LBD16    --------->ARR11(3) --------------->AGL15                  <---------ICU4          --------->YAB1        <---------ANAC55(2) -----------------AGL2                  --------->YAB1         --------->AHL20(2)     --------->ANAC55(2) ---------------->AG                   <---------ATHB12        --------->ICU4     <-----------TGA1 ---------------->AGL3                 --------->ICU4        --------->TOE2(3)    <-----------HVH21 < ---------------->AGL2                 <---------YAB1     ----------->RAV1(1)    --------->ANAC46  -- ---------------->AGL1                <---------TOE2(3) --------->At4g35610      --------->bZIP60(2)< ----AHL20(2)                      <---------MYB52(2) <------ZmHOX2a(1)--------->ANAC46 <---------CCA1(2)   tttccaaaattagttaaagaaaaacacaattttctcaactaatgattatagtcacaggagcagcattaattatccgccgaacaacgtcacatatctactt  21635200                                                                                        --------->ZAT2                                                                                        <---------At4g35610                                                                                     <---------At4g35610                                                                                <---------bZIP60(1)                                                                                --------->bZIP60(1)              --------->ARR14(2)                                                <---------TGA2(1)   <              <---------ARR14(2)                                                --------->TGA2(1)   -              <-----------ARR10                                               <---------ICU4        -    <-------TEIL                            <---------AHL20(2)                --------->YAB1        <   --------->ARR11(3)                      --------->AHL20(2)                <---------ATHB12      -- ---------TOE2(2)                          <---------AHL20(2)                --------->ICU4        -- ---->ZmHOX2a(1)                   ----------->GT1                          <---------TOE2(3)-------- ---------TOE1(2)            <-----------HVH21     <-----------GT1  --------->HSFB2a(2) --------->At4g35610   cctaggttcttgaacaaatctcccctctatgtgtcagaagtaaaattttttttttacaaaaaatagtcttctcaaactaatgatgtcatcagctccagat  21635300             <----------DOF2          <---------ARR11(3)          --------->GLK1(2) ---------AHL20(1)                                                            --------->DAG2       <- -------->AHL20(1)                                                           ---------->DOF2       -- -------->ARR11(3)                                                      <---------------AGL15  ------ ---------ARR11(3)        ---------->DOF2                        <---------ARR14(2)    --------->YAB1 ------->CCA1(1)--------->HSFB2a(2)                     --------->ZAT6  ============================= ------->RVE1(1)<---------HSFB2a(2)                     <---------ALFIN1------>ZmHOX2a(1)      <----- ->LBD16  --------->ARR11(3)----------->GT1 <----------DOF2      --------->ARR14(2)  ------------>CBF   aatatcttacaaaatcttttagaaactagaaagtaaaaatgtttcgccttaagaactcacactcgcgaaaactcctaaaaaaagttcaacaatagttaag  21635400         <---------At4g35610         --------->At4g35610                                             <---------STY1(2) ------>ZmHOX2a(2)                      --------->ARR11(3)               --------->STY1(2) --------ARR11(3)          --------->ANAC58                             --------->ANAC58 ------->ARR11(3)          --------->ANAC46                             --------->ANAC58  <---------ANAC46 --->ANAC55(2)             --------->ANAC58             <---------At4g35610 --------->ANAC58 =======HOX2a_HOX2a<---------CCA1(2)    <---------ARR11(3)    <----------DOF2    <---------ARR14(2) ----ANAC55(2)  <----------DOF2    ------------>CBF     --------->At4g35610 --------->ANAC58   tgatcttggtgagctaagcttttatctccaagtaagtttcaatatctatcttatgctcttctgacttttgcctcaagctagcaaatttgattttgtggga  21635500                                                                             <---------TOE2(3)                                                                   <----------DOF2          ---------                                           <----------ID1      <---------CCA1(2)       <-----------GT1                                         ---------->DOF2     <---------ICU4  <---------TOE1(3)    <--     <----------DOF2                 <---------ANAC46    <-----------GT1    <-----------RAV1(2)------   acgtcttctttttttgaatatttagaaaccctattagttgtgtaaaagacaaaacatttttactcatgtctttgattttcaggttgtagtaactcaacgg  21635600                                                                                               ------                                                                                               ------                               --------->CCA1(2)    --------->GLK1(2)                          <-----                              --------->ARR11(3)   <---------GLK1(2)             ------>ZmHOX2a(1)                         <---------HSFB2a(2) <-----------GT1        <---------ARR11(3)         <-----                     <------MYB46(1)     <---------MYB46(3)         --------->ARR11(3)   ---------->DOF2    ---------->DOF2  <------MYB83<---------AHL20(2)<---------ARR14(2)           --------->TOE2(3) >MYB52(1)          --------->MYB111(1)<---------At4g35610         <---------ALFIN1  --------->ZAT6 ----------CBF      --------->MYB59    --------->At4g35610  <----------DOF2     --------->TOE1(3) ->GAMYB           <--------P <---------ARR11(3)   --------->ARR14(2)       <----------DOF2   -------   tattgaaaaagatggattttggtaggtctagagatataatcagcggtttaccagattctcttctttgccacatcttgtctttccttaacaccaaagaagc  21635700     --------->REM1(1)                                 --------->YAB1 --->At4g35610                <------NtERF2        ------>ZmHOX2a(1) --->HSFC1(2)        --------->AHL20(2)  <---------ANAC58                                         <-- ----HSFC1(2) >>>>>>>ZML2     --------->At5g28300 <---------MYB59                            -------- ----At4g35610<---------HSFB2a(2)        <---------ANAC58 --------->ATHB12                  --------- -->GLK1(2)   --------->HSFB2a(2)    <----------DOF2   <---------ICU4             --------->ANAC46---   tgcttctacatcggttctagcaaaaaaatggcggtatctctttgcttctgttcctaatcttgatttcgatgactctgttcatctacgtcttggaaaaagg  21635800              <---------ANAC46            <---------MYB46(3)           <---------ZAT6               ---------->DOF2   <---------ZAT14                <---------YAB1  ------>ZmHOX2a(1)             -------->HAHB4                                               <------- -------ARR14(2)  <------ZmHOX2a(1)  <---------TOE2(3)    <---------ETT(2)         <------ZmHOX2a(2) ->DAG2  --------->MYB52(2)     --------->ATHB12       <----------DOF2<---------TOE2(3) --------->ALFIN1 ->DOF2<---------MYB52(1)      --------->ICU4        <---------At4g35610           ================== ------>ARR14(2) --------->ICU4<---------YAB1        --------->At4g35610          --------->ARR11(3)   aatcctgcagttagtggtgaggattatttgaaaatgattaatgaaagaagtgatcagctttcgacaagttttatggattttgtagatcaagtgttgagat  21635900                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)        -                                                                    <---------MYB46(3)              -                --------->ZAT14                                     <-----------RAV1(1)             <                <---------REM1(2)                               --------->ATHB12                   <-                <---------ZAT14     <------ZmHOX2a(2)         <---------ARR11(1)                 ----             ==============================HOX2a_HOX2a       <---------CCA1(2)                  ----- --------->ANAC58      <---------ARR11(3)                  <---------ANAC58                    <----- --------->ANAC58--------->ANAC46  --------->ARR11(3)      --------->ANAC55(2)                <------ --TOE2(3)   ------>ZmHOX2a(1)     <---------ARR11(3)      <---------ANAC55(2)         --------->HSFB2a(2) ===================HOX2a_HOX2a---------->DOF2             <---------ANAC58            <---------HSFB2a(2)   tgcaagacaattctcctctacacaagttctctctaaagatcagagattgtgttgatatagtccgtatcatttgttggatactcaaggttttggaacgcgg  21636000                                                                <---------ANAC58       ------>ZmHOX2a(2)                                        <---------ANAC58     <---------ARR11(3)                                   <----------DOF2     --------->ARR11(3)                                  ------>ZmHOX2a(2) <---------At4g35610                                    <------ZmHOX2a(2) -------->ARR14(2)                                      <---------RVE1(1) ------>TEIL                                       ---------->DOF2                                  < ---------ARR14(2)                  --------->ARR11(3) <---------ARR11(3)                           < --------CCA1(2)       ------->TEIL<---------GLK1(1)   <---------ARR14(2)                           < ----->ALFIN1        <-------TEIL  --------->GLK1(1)   --------->ARR11(3)                           < ---->At5g28300     --------->AtLEC2<---------ARR11(3) --------->ARR14(2)                    -------- ----ANAC46         --------->ANAC58--------->ARR14(2) <---------ARR14(3)              <---------At4g35610 ---DEAR3(1)        --------->ANAC58<---------ARR14(2) --------->ARR14(3)    <---------MYB52(1)------   tgtatctgatcttgaactagacatgcatttgaaatggaaatcttcacttccttcaaagatctttttgagtgagacactcgttaggctgaagctaagtgtg  21636100  Previous    Next  AGI:  At1g58310.1    Description:  F-box family protein. Identical to Putative F-box protein At1g58310 [Arabidopsis Thaliana] (GB:Q9LQC1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G14096.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21635612    to: 21637307    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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