Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ARR11(3)                                                             --------->GLK1(1)                                                        --------->At4g35610                                                     --------->ZAT2                            <-----                                                     <---------ZAT2                         ---------                                                     --------->At4g35610                    ---------            <-------TEIL                             <---------At4g35610                    <--------      ---------->DOF2                             <------ZmHOX2a(2)             --------->At4g35610 ----DOF2  --------->CCA1(2)                  <---------TOE1(2)        <---------MYB46(3)   <--------   gatcaaacaaaagattcaaatttgagtagattaagagatagagactcatacgatcagctgcagagttcttgagttgttcaagagcagagatgctagctgc  21629500                                                                                                    <   --------->ANAC46                    <----------DOF2                                   --------->ANAC58 --TEIL                     --------->ZAT18                                             ------->TEIL> >At4g35610        --------->At4g35610 <---------DAG2                                --------->ANAC58 >ZAT2       --------->At4g35610   ------->GAMYB                                     --------->ANAC46 -At4g35610--------->YAB1 <---------At4g35610                                        --------->ANAC58 -ZAT2   --------->GLK1(2)--------->At4g35610  <------ZmHOX2a(2)          <---------LBD16--------->ANAC58   attagacgcagaatcagaagaagcagagagctcacaacgagctttttggatcaaacctcgtctggttctattgttcttcggaagaacacgaaccccatta  21629600                                                                                               ------                                                                                               ------                                                                                            ------->GAMYB                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                          ------>MYB83                                                                                          ------>MYB46(1)                                                                                         --------->MYB52(1)                                                                                        --------->TOE1(2)                                                                                        ------->GAMYB                                                                                        --------->AtMYB61                                                                                        --------->TOE2(2)                                                                                       <---------MYB52(2)                                                                                       <---------MYB55(2)     <---------ATHB12                >>>>>>>>>TBF1                                     --------->MYB46(3)   --------->MYB52(1)             >>>>>>>>>TBF1          <---------YAB1               --------->ANAC58 <<<<<<<<<<<<<<<<LFY           >>>>>>>>>TBF1      <---------GLK1(2)           <----------DOF2-------- >>>>>>>>>>>>>>>>LFY    <------ZmHOX2a(1)  <------ZmHOX2a(1)      ---------->DOF2     --------->ANAC58   agacccaatggtgtctgtgaaacagaggacgaagaagaagaagaaggagatagattatggtgattcaataaagtctcaagctttggacaaccaacgaaag  21629700       ------->GAMYB       --------->ANAC46       --------->RAP2.6(2)           ------>ZmHOX2a(1)           <---------ANAC58       --------->DEAR3(1)      <-----------ARR10                 <---------ANAC58      --------->DEAR3(2)       --------->ARR14(2)            <----------DOF2      --------->MYB46(3)      <---------CCA1(2)             --------->TOE2(3)      <------------AtMYB77--------->TOE2(3)              ------>MYB83 --->ANAC58             --------->ARR11(3)               ------>MYB46(1)              <------ZmHOX2a(1) --->ANAC58             <---------ARR11(3)             --------->AtMYB61            <---------TOE2(3) -->DOF2               <---------GLK1(2)               <---------MYB59      --------->YAB1   cacttgaaaccgccattgaaacccaaaatctcaaatctcctctctgtcttcaaaaaaccaaacctttgcgagagagaataagaattgaggaagagacaga  21629800                                         <---------YAB1                --------->ALFIN1  --------->At5g28300    <---------TOE2(3)              <---------ANAC46------>ZmHOX2a(2)      --------->CCA1(2)        <--------P           <------ZmHOX2a(2)      --------->ARR14(2)       <-----------HVH21       <---------ANAC58    --------->GLK1(1)        <---------ARR14(2)  <---------ARR14(2)       <---------ANAC58    <---------GLK1(1)   <-----------HVH21 *TSS   --------->ARR14(2)      <----       <-------GAMYB     <------ZmHOX2a(1)--------->ATHB12   ----------->GT1----------->GT1     <----   gagggattgggttgcgatgtggaagaaggagatcgctgtgaatatgatttgtcagatttgaggctgaaaaatcaaatcgggtcaaaaccggtttagtaga  21629900                                                                                     --------->ALFIN1                                                                                   <-------GAMYB                                                                                   <------NtERF2                        ----------->GT1                                           --------->MYB55(2)                        <------MYB83                                              <---------MYB46(3)                  <---------WOX13(1)        --------->ICU4                   <---------WOX13(1)                 <------------CBF      <---------ANAC55(2)      <---------YAB1   <---------ANAC46                --------->ATHB12     --------->CCA1(2)       --------->GLK1(2)   <---------ANAC58               <---------YAB1       --------->ARR11(1)      <---------ARR11(3)   <---------ANAC58        <---------TOE2(3)           --------->ARR11(3)      --------->ARR11(3)  <---------LBD16    <------------CBF    <------MYB46(1)--------->ANAC55(2)<---------TOE2(3)--------->ATHB12         < -----AGP1<------ZmHOX2a(1)         <---------ARR11(3)<------------CBF    <---------AHL20(2)   ------ -----ARR14(2) --------->ICU4   ---------->DOF2 <------ZmHOX2a(1)         <---------YAB1       <-----   actggaaattgaggattatgattggatggtaatctaaagatatgtaatgaggaatgcattgagattttgatggaatttgattggcgggtggagaacacgt  21630000                            <------NtERF2                        <------MYB83                        <------MYB46(1)                    <---------ARR14(2)                    --------->ARR14(2)         ----------->RAV1(1)                 --------->ANAC55(2)       --------->ANAC58      --------->AHL20(2)     <---------ALFIN1  --------->MYB111(1) --------->ANAC55(1)   <---------AHL20(2) -----------GT1  <---------ANAC58          --------->ANAC46     <---------AHL20(2) ->MYC3          <---------ANAC46          --------->ANAC58  --------->AHL20(2) --MYC3          <---------ANAC58         <---------LBD16    <---------AHL20(2) <---------ZAT18 <----   tttatccacactcgtttttgcgtatttggtggcatttgttcttacacggcaacatataagtatttatttatttgtttcttagtagacttgtgactcttat  21630100                                                                                       <---------ARR11(3)                                                                                       --------->ARR11(3)                                                                                       --------->ARR14(2)                           <---------AHL20(2)         ----------->GT1                  <---------ARR14(2)                          <---------AHL20(1)         ----------->GT1                  --------->GLK1(1)                      <---------AHL20(2)         <---------AHL20(2)                   <---------GLK1(1)                      --------->AHL20(1)         --------->AHL20(2)                   <---------CCA1(2)              ----------->GT1                    <---------AHL20(1)                  <---------ARR14(2)       <---------ARR11(3) --------->AHL20(2)     --------->AHL20(1)                  --------->ARR14(2)       --------->ARR11(3) <---------AHL20(2)    --------->AHL20(2)                 --------->LBD16   <---------YAB1     --------->AHL20(2)    <------ZmHOX2a(1)                    <---------LBD16  --- --------->CCA1(2)   --------->AHL20(2)    ----------->GT1                     <-----------GT1   <--- -----YAB1<---------AHL20(2)          <---------At4g35610                 <------ZmHOX2a(1)  --------   gagttatgagattttatggtgaaattaattaatttgtttctgatgaggaaataaattggaaaaatatgtgtgcataggaattatccggatatctgaaaag  21630200                                                              <---------YAB1                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                     <---------ICU4                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                    <---------ATHB51                                                    --------->ICU4 ------>GLK1(2)                                    <---------AHL20(1) ------GLK1(2)                                  --------->AHL20(2) <------MYB83 -->DOF2      <------ZmHOX2a(1)  <---------YAB1 <---------AHL20(2) <------MYB46(1)       <---------YAB1   aatctatgttgatttaggagaaccatatgaaaaatatgaaaacttctgaataaaataattaaatattgttggtattctcaaaattcttcttatatttgaa  21630300                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                           <----------DOF2            <---------GLK1(1)                                     <---------ARR14(2)               --------->GLK1(1)                <---------YAB1       <---------ARR11(3)             --------->YAB1          --------->ARR11(3)         --------->ARR11(3)      ----------->GT1          <---------ARR11(3)         --------->ARR14(2)  <---------AHL20(2)         <---------GLK1(1)          --------->GLK1(1)    --------->AHL20(2)                      <---         --------->GLK1(1)          <---------GLK1(1)    --------->AHL20(1)       --------->GLK1(2)<-       --------->YAB1             --------->YAB1        --------->AHL20(2)  ---------->DOF2      <---   cattgtaaatgatatcttatatttgaacattgtaaatgatatctgctttaacaaaaaaaaaaattgtaaatgatatctgaaaggaatctatgtagattta  21630400  Previous    Next  AGI:  At1g58290.1    Description:  HEMA1; glutamyl-tRNA reductase. Identical to Glutamyl-tRNA reductase 1, chloroplast precursor (HEMA1) [Arabidopsis Thaliana] (GB:P42804;GB:Q9LQB9); similar to HEMA2, glutamyl-tRNA reductase [Arabidopsis thaliana] (TAIR:AT1G09940.1); similar to glutamyl tRNA Reductase [Nicotiana tabacum] (GB:CAN88916.1); similar to Glutamyl-tRNA reductase 1, chloroplast precursor (GluTR) (GB:P93111); similar to hypothetical protein [Vitis vinifera] (GB:CAN77439.1); contains InterPro domain Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; (InterPro:IPR015895); contains InterPro domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; (I Range:  from: 21627391    to: 21629865    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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