Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                         --------->bZIP60(1)                                                                                         ============                                                                                         <---------bZIP60(1)                                                                                         <---------bZIP60(2)                                                                                         ============                                                                                         <---------ANAC58                                                                                         <---------TGA1a                                                                                         --------->TGA1a                                                            ------->TEIL                 <---------ANAC58                                                          <---------SPL7                 <---------ANAC55(2)                                                         <---------ANAC55(2)       ================bZIP_DOF                                                         --------->ANAC55(2)--------->MYB52(1)                                                         <---------ANAC58  ----------->HVH21                                                         --------->ANAC58  ------->GAMYB --------->ANAC55(2)                                                         --------->ANAC58  --------->MYB46(3)                                                         <---------ANAC58  --------->At1g77200                                                        ------->TEIL       ========================MYC_MYB                                                        <-------TEIL       --------->DREB2C(2) ---------ARR11(3)                                      --------->SPL7     --------->DEAR3(1) ---------ARR14(2)                                      <---------TOE1(2) --------->MYB46(3)        < -------->ARR11(3)                                      --------------->AtSPL3     ---------->DOF2  < -------->ARR14(2)                                  <---------------AtSPL3--------->DEAR3(2)       <- --------CCA1(2)   <---------AtMYB61            <---------WRKY38(1)    --------->MYB46(3)<---------O2 ---->TEIL    <---------TOE2(3)                 <---------WRKY45     --------->ARR14(2)  --------->O2 ----->GT1    <---------TOE1(3)                 <---------WRKY12     <---------ARR14(2)<------ZmHOX2a(1)   tatatcttctatgtataaggtatggtttctcaacatttttgaaatggaagtcaacgcgtacgtaccaattgtatccaccgacggagaaaggacgtgactc  21617400                  <---------WRKY18(1)                 ----------->HVH21                                                               <---       <------NtERF2     <----------DOF2                          ------->TEIL                  <----      ------>NtERF2 <---------At4g35610                           <---------ARR14(2)      <---------- ->HVH21  <---------MYB52(1)                                      --------->ARR14(2)   ------->TEIL =========================bZIP_DOF                          <---------SPL7             <---------ARR11(1) =========================bZIP_DOF                      --------->ANAC58               <---------ARR14(2) ---------ANAC58 --------->WRKY38(1)                    --------->ANAC58               --------->ARR14(2) ---------ANAC58 --------->WRKY12       ---------->DOF2 --------->ANAC46              <---------CCA1(2) --------ICU4  <----------DOF2     <----------ID1--------->ARR14(2)       <------ZmHOX2a(1)  <-------   atacttgccaccgttttctttgacctgctttgccatagtgacaaaagactggaacttcacgcagtacgaatttggaggacgagttctcgtatctgttgtt  21617500                                                                       <---------GLK1(2)                                                                       --------->KAN4(2)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)--------->ANAC46                                                                      --------->HSFB2a(1)--------->DEAR3(1)                                                                      <---------HSFC1(2) --------->DREB2C(2)                                                                      --------->HSFC1(2) ------->GAMYB                                                                 --------->ANAC55(1)    --------->DEAR3(2)                                                                 --------->ANAC46       --------->MYB46(3)                                                                 --------->ANAC58      <---------ATERF1(1)                                                                 --------->ANAC58      ------>NtERF2                                                                <---------LBD16       <---------ALFIN1          <---------At4g35610                                  <---------ALFIN1       --------->ANAC46     <---------ANAC58                                        ==========================RAV     <---------ANAC58                                        <---------ALFIN1   --------->GLK1(1)  -- <---------ANAC58                                     <-----------GT1 <---------HSFB2a(1)--------->RAP2.6(2) <---------ANAC58     --------->YAB1        <---------ZAT2--------->ANAC58   --------->LBD16       <- ------At5g28300      <---------ICU4        --------->ZAT2--------->ANAC46 ----------->RAV1(2)------- -------GT1          --------->ICU4       <------NtERF2   --------->ANAC58 <---------LBD16------>NtERF2 -RAV1(1)<---------ARR11(3)   --------->ANAC58  <------MYB46(1)--------->MYB52(1)    --------->MYB46(3) --MYB46(3) --------->GLK1(2) --------->ANAC58  <------MYB83 ----------->RAV1(1)<---------GLK1(1)<---   actgcttgcgagagcttctgttcatcatgagcacgaacagaggcagagctaggttttgacgagccacacggaagattccctgagttccccaccgccatga  21617600                                                                      ------->GAMYB                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                            --------->GLK1(2)                                                            <---------ARR11(1)                                                            <-----------ARR10       --------->ANAC46                                         <--------P         ------->TEIL            --------->ANAC58                              <------MYB46(1)              <---------CCA1(2)        --------->ANAC58                              <------MYB83<-------TEIL     <---------ARR14(1)  <---------ICU4 ------->HSFB2a(1)           <---------TOE2(3)   <---------TOE2(3)    --------->AtMYB61 --------HSFB2a(1)           --------->MYB59     <---------TOE1(3)   --------->MYB46(3)--------->MYB52(1) -->AtLEC2         <---------ANAC58   <---------TOE2(3)  <---------ANAC58      <---------------AtSPL3 --------GT1       <---------ANAC58   <---------TOE1(3)  <---------ANAC58     --------->ICU4        -   aaccttcttctactactgcttccgtctcaattaggttttgaaggttgatataaggttttgcgaatcttgcaacctccacaatgagtacgaaacagaagaa  21617700                                                                                               <-----                                                                                       <---------ANAC58                                                                                       <---------ANAC46                             <---------DAG2                                       <---------ICU4   <-                 --------->YAB1         ------>ZmHOX2a(1)<----------DOF2          --------->YAB1   --                 --------->TOE2(3)      --------->At4g35610                       *TSS <---------ANAC58         --------->ATHB12    <----------DOF2          <-----------GT1            --------->ICU4<-----  <---------ETT(2)  <---------ICU4<----------DOF2  <---------ICU4              --------->YAB1  ------ -------->At4g35610 --------->ATHB51    <---------At4g35610    <---------------AGL15 --------->ARR11(3)   gcagtagacaaagattgaaccataatttctgcttttcttttcctctgaatacattatttctttttctatattttgtgtttgtaataatgtcttgttttat  21617800                  --------->YAB1                  -------->HAHB4      <-------TEIL                                       <---------MYB52(1)    <-----------TBP <---------YAB1   --------->CCA1(2)                                  --------->TOE2(3)   ------->TEIL--------->YAB1       --------->ARR14(2)                               <---------ARR11(3) ----------AtSPL3<---------YAB1 <---------ANAC55(2)                                  --------->ARR11(3) ------TEIL    <---------ICU4   --------->ANAC55(2)                        ------>MYB46(1) --------->MYB52(2) ----->TEIL   --------->ICU4<-----------HVH21                              ------>MYB83------>ZmHOX2a(2) ----------AtSPL8----------->GT1<---------O2        --------->ATHB12    ------------>CBF<-------GAMYB --------->AtSPL8--------->ICU4 --------->O2   <---------YAB1         --------->ANAC46<------ZmHOX2a(2)   gtacgtatatataggcataatgataatatgtgtcacgagattcacgtttattagtgattagttctcagtaatacaccaatctcatgagatcgttagttct  21617900                                 <------MYB83                 --------->ANAC46                                 <------MYB46(1)              --------->ANAC58                                <---------TOE2(2)             --------->ANAC58                                <---------TOE1(2)       <-------MYC2                   <---------ANAC58                             <---------O2               ------->MYC3                   >>>>>>>>>>AtMYC2                             <---------TGA1a            ------->MYC2                   <---------ANAC55(2)                             --------->O2               <-------MYC3                   <---------ANAC58                             --------->TGA1a            <-------MYC4                   <---------ANAC55(1)                             --------->ANAC58           ------->PIF5                   --------->ANAC55(2)                             <---------ANAC55(2)        <-------PIF5                  <-------TEIL                             --------->ANAC46          --------->ANAC58             --------->ARR14(2)                             --------->ANAC58          --------->ANAC58             <---------ARR14(2)                        ----------->HVH21     --------->AHL20(1)                   <---------GLK1(1)                    --------->ARR11(3)        <---------AHL20(2)                   --------->GLK1(1)                    <---------ARR11(3)        --------->AHL20(2)                   <----------TaMYB80          ------>MYB83------>ZmHOX2a(2)       <---------AHL20(1)                   --------->CCA1(2)          ------>MYB46(1)    --------->ANAC55(2)  <---------ICU4                  ---------->TaMYB80     --------->ANAC46<------ZmHOX2a(2) <-----------GT1<---------TOE1(2)    <-----------RAV1(1) ------   cagtaatacaccaatctcatgagatcgtgacacgtaggtattcactaattaattagcacgttctacgacatattgttttgttgggatatacgtgtctcac  21618000                                                                                 --------->ANAC46                                                                                 --------->TGA1a                                                                                 --------->ANAC58                                <-----------GT1                                  <---------TGA1a                               <-----------GT1                                   <---------O2                              <---------AHL20(2)                                 --------->O2                            <---------YAB1                                       =================bZIP_DOF                          <---------ICU4                                         --------->ANAC58                         --------->ICU4                                         ------->TEIL                         <---------YAB1                                      --------->ANAC58                       --------->YAB1                                   <---------ZAT6                       <--------HAHB4                                 <---------ANAC58                       <---------ICU4                        --------->ZAT18 <---------ANAC55(2)               <-----------RAV1(1)                           <---------ZAT18 --------->ANAC58<-------  --------->YAB1<---------At4g35610                 --------->ANAC58  <---------ANAC46       -------- --------->AGL15--------->At4g35610                 --------->ANAC58  <---------ANAC58 ---------->DOF2   aaaatagtaattgttttctgctgcatcattattttaacttataagtacaagagcaagtcatagtggacaacttcgtgttacgcacgtctcaaagcagctt  21618100                                --------->MYB46(3)                                <---------MYB55(2)                                <---------MYB111(2)                                <---------MYB52(2)                                <---------MYB46(2)                                <---------MYB111(1)                               ------>MYB83                               ------>MYB46(1)                             <---------MYB111(1)                           --------->SPL7                        <---------ANAC58                        <---------ANAC58                       <-------TEIL                       --------------->AtSPL8                 ------>ZmHOX2a(2)        --------->ANAC58                <------ZmHOX2a(2)         --------->ANAC58               --------->ARR14(3)    --------->ANAC46                                             ---               --------->ARR11(3) -------->P           <---------YAB1                           -----         --------->YAB1--------------->AtSPL3  --------->YAB1                                   ----- --At4g35610   <---------ARR14(3) --------->MYB52(1) <---------ICU4    --------->CCA1(2)       ------ ->At4g35610   <---------ARR11(3)------->GAMYB<-------TEIL<---------TOE2(3)                  --------   aaaaaacccattgatgagatctcgattcgtaccaactaccagacacgattcatactcattaatgttactagagatttgatttttcaacaaaacaaaaaaa  21618200                                                                             <-------GAMYB                                                                            <---------MYB46(3)                                                                           <--------P                                                                         <---------MYB46(3)                                                                        <---------TOE2(3)                                                                        <---------YAB1                                                                   --------->ZAT6    <---------CCA1(1)                                             <---------ZAT14   --------->ARR11(3)                           <-----------GT1   --------->ZAT18   <---------ARR11(3)                     <---------MYB52(1)      <---------ZAT18 ------>YAB1                             <----------DOF2          --------->ZAT14 ---->AHL20(1)         <---------GLK1(2)--------->TOE2(3)       --------->ZAT14 ---->AHL20(2)    <-----------GT1     <-----------GT1           <---------ZAT14                 ----- --->YAB1--------->At4g35610          ---------->ID1            --------->REM1(2)    <---------AHL20(2) ->AHL20(2)     --------->AHL20(2)   <-----------GT1            <---------ZAT18      <---------YAB1   taatagatattatctgaatttaacagattatagtttttttttcctttatttcactatcagtctctgtgtacactatggttgttattttttattgaatgaa  21618300  Previous    Next  AGI:  At1g58270.1    Description:  ZW9. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G28220.1); similar to unknown [Populus trichocarpa] (GB:ABK94833.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 21615781    to: 21617782    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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