Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ICU4                                          --------->ATHB12                 --------->TOE1(3)                                         --------->ICU4               ---------->DOF2                                       --------->YAB1                <---------AHL20(2)            --                                      <---------AHL20(2)         --------->AHL20(2)              <---                                 <---------YAB1               <---------ICU4                    <----        <----------ID1          <---------ARR11(3)            <---------AHL20(2)          ------->TEIL --------ANAC46                 --------->ARR11(3)           --------->AHL20(2)<---------TOE2(3)<---- ------ANAC58                  --------->RVE1(1)           --------->YAB1  --------->TOE2(3)    <---- ------ANAC46                  --------->CCA1(1)  --------->MYB59<---------AHL20(2)--------->AHL20(2) ------ANAC58            ----------->GT1 <---------YAB1   --------->AHL20(2)   <---------YAB1 <------   cgtgtgaatgaagacaaaaaaaaaaactagaaaatatcatataatgatttgtaaggtcgattaataaatatttaaagccttaagataaaatgaacctgtc  21585600         <---------bZIP60(2)       --------->YAB1                   ----------------->AGL3                                      <      <---------ATHB12                  <-------TEIL                                              <--      --------->ICU4              --------->ALFIN1                                               <--- ------->SPL7                    ------->MYC3                                                    ---- ------SPL7                      <-------MYC3                                                 ------- -----ANAC58                     <-------MYC2                                       <---------TOE2(3) -----ANAC58              ---------->DOF2--------->YAB1                         --------->TOE1(3)---- -----ANAC46      ---------->DOF2------->MYC2                                   --------->TOE2(3)<--- -----HVH21      <---------ATHB12--------->TOE1(2)       --------->YAB1       ------->TEIL-----------   gtaagacaatgatgtgccaataaaccgaaaaagaacgtgggattcataaatagtggcagtcagaacattacaaacttatgaacattaacatatcgataat  21585700      --------->ANAC58  --------->YAB1  -------->HAHB4 <---------YAB1 ---------TOE2(3)                         <---------AHL20(2) -------AHL20(2)                       --------->TOE2(3) ------AHL20(1)                      --------->ARR11(3) ----->AHL20(1)                      <---------ARR14(2)                                           <-- -->AHL20(2) --------->At4g35610     <---------ARR11(3)                                          <--- ----->AHL20(2)      ---------->DOF2--------->GLK1(1)                                         <------ZmHOX2a(1) ------AHL20(2)<---------ZAT18<-----------GT1       <---------ICU4                   <xxxxxxxxxxxxxxx >GT1 --------->ANAC58--------->DAG2<---------CCA1(2)            xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ttaatgataagaaacagcacacataaagtattttacgaatatcttaaattttagttattacatagtaaaccaaaaaatccctcgcacaagtctggaggag  21585800                                                                               <---------DAG2                                                                               <----------DOF2                                                                 --------->MYB52(1)                                                     <---------ATHB12         <---------ANAC46                                            <---------DAG2    --------->ANAC46<---------ANAC58                                       ---------->DOF2        <---------ANAC55(2)          <--------- -------ANAC46                     <--------P       --------->ANAC58          <---------ANAC58  ----- ---NtERF2                      <---------YAB1      --------->ANAC58------->GAMYB     <-----------GT1 xxxxxxxsmallRNA(fl3)   <---------ARR14(2)  <----------DOF2   --------->ANAC55(2)    <-----------GT1   gcatgtagtagtattccacatgagcaaatttgttctggttgcaaagctttttgcaagcattctcacataacggaagagttgcttttttaaacactttcat  21585900                                                                       --------->DAG2                                                                      ---------->DOF2                                                                 <---------YAB1                                                               --------->YAB1                                                              <---------YAB1                                                            --------->YAB1             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <--------HAHB4           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <---------ICU4       <---------ICU4     <        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              --------->ICU4        --------->YAB1  ----       <---------HSFB2a(2)           <---------SPL7        <---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------ATHB12 <---   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->ATHB12                  --------->YAB1      --------->MYB46(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -DOF2<---------LBD16              --------------->AtSPL3 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---- ---->AtLEC2<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  <xxxxxxxxxxxxxxxx   gcattgattcgggacacaatgcttaacacatacttctatcgtactcgcatatgttgaaaccatcattataaataaagctacaatcatcaaaacactgtat  21586000      --------------------->WRI1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)    <---------YAB1                 *TSS    <---------AHL20(2) --------->ATHB12        <---------ZAT6                                     --- ----------DOF2        --------->ATHB51    <---------YAB1                                    -------- ----->ARR11(3)       --------->ICU4  ------->TEIL                                           -------- ------ARR11(3)    <------NtERF2 --------->CCA1(2)                           <-----------TBP <------- -----CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        <---------ZAT6    --------- xxxxxxxsmallRNA(i2)  <---------MYB52(1)<---------AHL20(2)          <---------YAB1----------->GT1 <--   atcttttttattgtttgagtcgccattatttgaagagatgaatttatgagtgttcaagcttattcaaattttgtttgtgttatatagcaaaaaaaaaaat  21586100        <---------YAB1      --------->ATHB12                          ----------->GT1     --------->ICU4                        --------->AHL20(2)     <---------YAB1                      <---------------AGL15   <------ZmHOX2a(1)                     --------------->AGL15                  --------->AHL20(2) ------>MYB52(1)                         <----------DOF2                    <---------AHL20(2) ->AHL20(2)                           <-----------GT1                       --------->AHL20(2) ->AHL20(1)             <----------DOF2  <---------DAG2                    <---------AHL20(2) --AHL20(2)            <---------ANAC58 <-----------------AGL3    <----------DOF2 >AHL20(2) <---------TOE2(3)      <---------AHL20(2)           <-----------GT1  <---------AHL20(2) ---------GT1          <---------ANAC58 ----------------->AGL2<-----------GT1  <---------AHL20(2)<---   taacaggatgattaatgttgagttggctttctgtatatttttactttatatagcaaaattagttttatctttttaaaattatttatttatgaagtttatt  21586200                        <---------MYB52(1)                       --------->At5g28300                      ----------->GT1                   --------->MYB52(1)                   ------>MYB83xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   ------>MYB46(1) <---------ZAT18              <-----------GT1  <-----------RAV1(1)         <---------ANAC46  <---------YAB1              --------->MYB52(2)                --------->WOX13(1)   <-----------GT1--------->MYB55(1)        <----------DOF2                          ------>ZmHOX2a(1) ------AHL20(2) --------->MYB46(3) <-------TEIL  ---------->DOF2       --------->ANAC55(2)       <---   ttttttttctggtttgtaaccaaacggttatttttggtgcatttttctttagaaagttagtttttttttgtttatgtattggctgtcctagcaatctatc  21586300                             ------>MYB83                             ------>MYB46(1)                           <---------MYB46(2)                           <---------MYB111(1)                           <---------MYB59                           --------->TOE2(3)                          ----------------->AG                          <-----------------AGL1                  --------->At5g28300                          ----------------->AGL1                  --------->LBD16                         -------->P                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                         ------>MYB46(1)                         ----------->GT1                         ------>MYB83                            --------->TOE2(3)                ---                       <---------MYB59 ---------->DOF2      <----------DOF2                   -------                       <---------MYB46(2)                <---------ARR11(3)               <---------ARR11(3)                 --------->ANAC58    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<-------TEIL      --------->ARR11(3)    <---------GLK1(2)  <---------MYB111(1)  <---------REM1(1)  <---------At5g28300 <xxxxxxxxxxxxxxxxx -------DOF2     --------->ANAC58 <---------ANAC46       --------->ARR11(3)   <---------MYB46(3)  <--   ttttcaaattcttgttgtcaagaaacctacctaattcggtgtaaagttgtagattataagttctttaccgtaaatacatgttgttggaagaacatcttag  21586400               --------->HSFB2a(1)           <---------MYB111(2)           --------->MYB46(3)           --------->AtMYB61           <---------MYB52(2)           <---------MYB111(1)           <---------MYB55(2)           <---------MYB46(2)          --------->ANAC58          --------->ANAC58          --------->ANAC46         ------->TEIL                                                                            ----       --------->ZAT18         <----------DOF2               <---------TOE2(3)                 ------    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  <---------AHL20(2)                  ------    ---------->DOF2     --------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             ------- ------>ZAT18------>MYB83      ------>ZmHOX2a(1)          --------->AHL20(2)              <xxxxxxxxxx -------->AtSPL8        --------->ANAC58      <---------ARR11(3)                       ----------->GT1 xxxxxxsmallRNA(fl3)    --------->ANAC46      --------->ARR11(3) ------->TEIL       <---------ARR14(2) -------ZAT18------>MYB46(1)  --------->TOE2(3)           <---------AHL20(2)        --------->ARR14(2)   taccctaaatgcaccaaaccttcttcaagcatcctttatatgaaacaagaacttagggaatttaatgaatttttgaatgagggatggaactgcaaaaaat  21586500  Previous    Next  AGI:  At1g58242.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G34828.1) Range:  from: 21585629    to: 21586035    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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