Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->GLK1(1)                                                              --------->CCA1(2)                                                             --------->ARR11(3)                                                             --------->ARR11(1)                                                             <---------ARR11(3)                               <---------YAB1                --------->ARR14(2)    <---------YAB1          --------->ICU4             <-----------GT1       <----------DOF2 <---------ARR11(3)         <---------YAB1          ----------->GT1     <---------At4g35610 --------->ARR11(3)       <---------At4g35610 --------->YAB1 <---------ARR14(2)          <----------DOF2 -------TOE2(3)    --------->ARR14(2)        --------->AHL20(2)      <-------TEIL<---------TOE2(3) ------>DOF2       <---------ARR14(2)    --------->AHL20(2)----------->ARR10 <---------DAG2  <-------   aaagttcttataaaaaataagtatatggagatgattatcggtataaaataaaaattgtaacaagatatgcattcatctcctttatggataactttgtatc  21577000                      <-----------HVH21                    --------------->AGL15                   <-----------------AGL1                   <-----------------AGL2                   <-----------------AG          --------->YAB1         <---------ATHB51         <---------ATHB12      <---------------AGL15                                                           ---------->DOF2      --------------->AGL15                               <---------REM1(1)      ------------>CBF     ================================MADS_MADS     --------->ARR11(3)        <---------ANAC58     ----------------->AGL3            <----------DOF2 <-----------RAV1(1)   <---------ANAC58      --     ----------------->AGL2      --------->YAB1    <---------ARR11(3)  --------->MYB52(1)      ------ --CCA1(2)<--------ATHB1  <---------ANAC46        --------->YAB1    --------->YAB1   <---------ATHB12   cattgaaaccaataatagaatacctgttatgggtagcataacttttggcccatgatattgttgtagagaaacataactggccttccaataaagaaaatga  21577100                                                                            <----------DOF2                                                                          <---------------AGL15                                                                          <----------DOF2                                                                  <-----------TGA1                                                                  <-----------HVH21                                                                 <---------ANAC58                             --------->GLK1(1)                <----------DOF2                      <---------ANAC46               <---------ANAC58   --------->ZAT14          ----                      <---------ANAC58               <---------ANAC58   <---------ZAT14    --------->AHL20(2)         ----------->GT1----------->GT1          <----------DOF2 <---------ANAC58          <---------AHL20(2) --------->GT1        <---------ANAC58     ---------->DOF2   <---------ANAC58             --------->AHL20(2) --->ATHB12      <-----------RAV1(1)   ---------->DOF2       <---------ANAC58   ---------->ID1 <-----   ctggtgaatttgggtaaaaatgtggctagtgatttctatgtgaaagaaagcctttacttggtttctttcgtcactgctctttgtagttttcatttatttt  21577200                           <---------------AtSPL8                           --------------->AtSPL8                                <---------ANAC58                          <------------CBF                       ------------>CBF<---------ANAC58                        <---------ARR11(3)                      --------->ANAC46 <---------ANAC46   --------->CCA1(2)    --------->ARR14(2)           --------->YAB1          <---------ANAC58 --------->AHL20(2)     --------->ARR11(3)        --------->TOE2(3)          <---------ANAC58 ----->AHL20(2)         <---------ARR14(2)       ------>ZmHOX2a(2)           <---------ANAC46    ---- ----AHL20(2)   <----------DOF2     <---------ARR11(3)  <---------ICU4 <---------YAB1         -------   aaaatatatgcgaggctgcttttacagatattgtacaacatctatggctgatccataatactttctactcaatattcttgcttgcgagttctggtgatga  21577300                                       --------->ZAT2  --------->At5g28300                                       <---------At4g35610         <---------ICU4                <---------ZAT2--------->ANAC46      --------->YAB1               <-----------HVH21 --------->ANAC58        ---------->DOF2    <-----------GT1             <---------GLK1(2)    --------->ANAC58      <---------ATHB12      ---- ------->GT1   --------------->AGL15   --------->At4g35610       --------->ICU4   --------->ALFIN1 -->ICU4<---------YAB1       --------->ANAC46      <---------ALFIN1    ------------>CBF       <------   tgttattttcatcatttcatttttcagaaacacagaatgtcagcagtcttgcaccacggtaactgaacttatgaccaatgaaagatggtggaatttgtat  21577400                                                <---------ARR11(3)                                         --------->LBD16                                         ----------->GT1                                       <---------LBD16                                     <---------ARR14(2)                   --------->PCF5                         <---------AHL20(2)     --------->ARR11(3)        --------->PCF2                         <---------YAB1--------->SPL7             <---------At4g35610                       <---------------AGL15  --------->ICU4      --------->At4g35610                  --------->ANAC55(2)<-----------HVH21           --------->MYB52(2)     <---------LBD16  <-----------------AGL3---------->DOF2    --------->DOF5.7(2) --------->GLK1(2)<---------ANAC55(2)<---------SPL7            <---------MYB52(1)         ---------->DOF2 ----->YAB1 <---------ARR11(3)     <---------------AtSPL3     --------->TOE2(3)         ---------->DOF2 ---AtLEC2  --------->ARR11(3)     <---------------AtSPL8   <---------ATHB12<-----------------AGL1   gacaatctgtggaagataatatgtgatattaatggaaggggtccggtaaagatgtctcccaaatcgttagctactggtccctctattggccaaagagcaa  21577500                                          <-----------RAV1(2)                                          <------NtERF2                             --------->At4g35610                          <---------At4g35610          >>>>>>>GRF7           <---------ANAC58                        <-----------RAV1(2) <-------GAMYB              <---------ZAT14                    --------->KAN4(2)    <------NtERF2<-----------RAV1(2)    <---------ANAC58                   --------->HSFB2a(1)   <---------At4g35610           --------->ZAT14                   <---------KAN4(1)   <---------RAP2.6(2)   <---------ARR14(2) ----------->GT1            --------->ATHB12 <---------At4g35610    <-----------HVH21  <---------ZAT18            <---------ICU4--------->At4g35610 <---------MYB46(3)       --------->ZAT18            -------->ATHB1<---------ZAT2 --------->LBD16 <------ZmHOX2a(1)  --------->ATHB12           <---------YAB1 --------->ZAT2--------->RAP2.6(2) <------ZmHOX2a(1)<---------ANAC46     ---   gaggtttagtagaatcattgaatgttccagctgctgaaatggccgcagttgttgtgtcaggaggaattggcagtgcattgagtggaaaaatgaacaaaaa  21577600                                                                                          --------->ANAC58                                                              <----------DOF2             --------->ANAC58                  --------->MYB52(1)    ------->TEIL<---------ANAC58                      --------->ANAC46      --------->ANAC58               --------->ANAC58    <-----------GT1                 --------->DAG2      --------->ANAC58               --------->ANAC58   ---------->ARF1        --------->ZAT14     --------->DAG2       ----------->ARR10         <---------ANAC58           <---------ZAT14    ---------->DOF2     ----------->GT1 <---------ARR14(2)    <---------DAG2   <---------REM1(2) ------>TOE2(3)  ------>ZmHOX2a(1)   --------->ANAC46  <-----------HVH21<---------AtLEC2---------->DOF2   cgttgataaagcaatgctcctaaggggggagaaatgcccacgaatcgtgtttaggcttgtcaccctttatctgtgcatgtcttcactggaaaaagccact  21577700                 <---------MYB59                --------->bZIP60(1)                      --------->ANAC58                <---------bZIP60(1)                      --------->ANAC58             ----------->HVH21                 <---------YAB1                           <---------MYB46(3)           <---------At4g35610            <---------At4g35610                        <---------ANAC46           --------->At4g35610            --------->At4g35610                   --------->ATHB12           --------->ZAT2              <---------ZAT2  ---------->DOF2         <---------YAB1         <-----------RAV1(2)           <---------At4g35610                    <----------DOF2 <------        <---------At4g35610            --------->At4g35610                <---------CCA1(2)   <------   <---------ZAT14                 XXXXXXXXXXXXXXXXXXXX>MIR868           ------->TEIL<---------ANAC58   --------->ZAT18         <---------ANAC58    --------->ICU4     --------->ZAT18    <---------ANAC58   --------->ZAT14         <---------ANAC58  <---------At4g35610--------->At4g35610 <---------MYB46(3)   agatgtgtacagcaggtgacctcactcttgccttccttcttagctgctgatgatgaacaaagcaagagcagactgcatctctttattgggtgtttgcttt  21577800                                                              ----------->GT1                                                              <---------ANAC46                  --------->ANAC58                            <---------ANAC55(2)       --------------->AGL15                                  <---------ANAC58      <-----------------AGL1                                  <---------ANAC55(1)           <--------      ------>ZmHOX2a(2)                                       <---------ANAC58       --------->GLK1(2)     <------ZmHOX2a(2)                                        --------->ANAC55(2)   --------->GLK1(1)    <---------ARR11(3)                                 <---------ZAT2           --------->LBD16    --------->ARR11(3)                                 ----------->RAV1(2)     <---------ANAC58   <---------At4g35610                                 --------->At4g35610     <---------ANAC55(2)   --------->GLK1(1)                                   <---------At4g35610     <---------ANAC46   <---------GLK1(1)        <---------DEAR3(1)  <---------CCA1(2)              <---------HSFB2a(2)   --------->At4g35610   ----------->HVH21  <-----------HVH21<-------TEIL      <---------ANAC58   --- ----DOF2         --------->ANAC58       <---------AtLEC2----------->HVH21    <---------LBD16   ----- ---DAG2        ---------->DOF2 --------->ABI4(2)     ------->TEIL        --------->MYB52(2)<--------   atgtgagatcccagtatggaaagctagacgacggtgctcgttttcatgtcatatcgcacctgatacgtgaaactgtaagttgcggaaaatccatccttgc  21577900  Previous    Next  AGI:  At1g58230.1    Description:  WD-40 repeat family protein / beige-related. similar to WD-40 repeat family protein / beige-related [Arabidopsis thaliana] (TAIR:AT2G45540.1); similar to hypothetical protein OsI_023317 [Oryza sativa (indica cultivar-group)] (GB:EAZ02085.1); similar to putative LvsC [Oryza sativa (japonica cultivar-group)] (GB:BAD25221.1); similar to hypothetical protein OsI_005826 [Oryza sativa (indica cultivar-group)] (GB:EAY84593.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain Beige/BEA Range:  from: 21577371    to: 21582530    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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