Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->LBD16                                                                --------->ANAC58        --------->ANAC58                                                                --------->ANAC58      --------->MYB52(1)                                                                --------->ANAC46      ------>MYB83                                                             --------->PCF2           ------>MYB46(1)                                                             <---------TCP20         --------->MYB55(1)                                                             <---------PCF2         --------->MYB46(3)                                                          --------->ALFIN1          --------->AtMYB61                                          <---------CCA1(1)  --------->PCF5         <---------MYB46(2)                                       ----------->GT1  <---------ANAC58  <---------YAB1--------->ANAC46                <------ZmHOX2a(1) <---------YAB1        <---------ANAC58 <---------TOE2(3)               ----------->GT1 --------->ICU4         <---------YAB1    <-----------GT1 --------->ANAC58               <----------ID1  <---------YAB1  ------------>CBF<---------LBD16      <---------MYB55(2)              ----------->GT1--------->YAB1   <-----------GT1--------->TCP16(1)    --------->ANAC46          ---------->DOF2   --------->ICU4<---------RVE1(1) <---------TCP16(2)   <-----------GT1   ttttttttggattaaagaggaaaaatggaaatgatgatgaatggatattttcaattttgagtggtcccgcaaatttacgattttcaccaaacggaatttt  21556900                                                               ------>MYB46(1)                                                              --------->ORA47(1)                                                             --------->DREB2C(2)                                <------------ATHB5           --------->DEAR4(1)                                --------->ATHB12             <---------MYB111(2)                                --------->ATHB51             ------->GAMYB                               <---------YAB1      <---------ARR14(2)                               <---------AHL20(2)<---------SPL7------>MYB83                       ------->PIF5             <---------ANAC46                       ------->MYC3             <---------ANAC58                       <-------MYC2             <---------ANAC55(2)                       <-------PIF5             --------->ANAC55(2)                       <-------MYC3             <---------ANAC55(1)                      --------->bZIP60(2)  ==========================MYC_MYB                      --------->ANAC55(2)  --------->O2      <---------MYB111(1)                      --------->ANAC46     <---------ANAC46  --------->MYB46(3)                      ===============================================MYC_MYB                      --------->O2         --------->TGA1a   <---------MYB55(2)                      <---------TGA1a      <---------TGA1a   --------->DEAR3(1)                      --------->TGA1a      <---------O2      <---------MYB46(2)         --------->LBD16    <-----------------AGL3 --------->ARR14(2)        --------->ANAC58    <-----------------AGL2<---------CCA1(2)        --------->ANAC58    ------>ZmHOX2a(2)   <---------ANAC58       <---------AHL20(2)   ---------        --------->ANAC46  <---------ARR11(3)   <------NtERF2--------->MYB46(3)            <---------MYB52(1)       <---------LBD16<---------O2       <-----------HVH21  --------->DEAR3(2)    <---------PCF2     --------->ARR14(2)------->MYC2    --------->DEAR3(2) <---------ALFIN1        --------->PCF2   tgactcttatccgcaatactttccacgtgatctataattggaccgtcgtggcgtatcgctccaccgaccatattatatgaaatgggcccatcgttaggcc  21557000                              <-----------GT1                              --------->ZAT6             <---------At4g35610                            <-----------GT1  <----------DOF2                       <---------YAB1       <-----------------AGL2             <-----------GT1      <-----------GT1<-----------GT1        <-----------------AGL3        <----------DOF2<----------- >MYB59           <---------ZAT6        <-----------RAV1(2)     <---------AHL20(2) -------->P   cattctatttacaggtttttgtgttactattttcactatggtccaggctttttttggacagcccatataatctactctttttttcaacccgaattgggcc  21557100                                          ----------->TBP                                          <---------YAB1                                        --------->YAB1                                       <---------YAB1                                    <---------AHL20(1)                                    --------->AHL20(2)                                <---------ICU4                                --------->YAB1                                <--------HAHB4                               --------->ICU4                      <------ZmHOX2a(1)                               <---------YAB1                ------>MYB83                               <---------ATHB12              ------>MYB46(1)               <---------ARR11(3)   <---------AHL20(2)     --------->AtMYB61   --------->SPL7         --------->ANAC55(2)              <---------MYB59  <---------ATERF1(1)     <---------ANAC55(2)  <---------GLK1(2)<---------LBD16   <---------YAB1 -CBF          --------->ARR11(3)   --------->AHL20(1)------>ZmHOX2a(1)    --------->YAB1 --------->ARR14(2)   tgggctacggccttacaaatctttcaacaggtaatcattttattataaatattctcctaaaccaaaccaggaaattttcatactctgattcggttccatt  21557200                                <------------CBF   --------->HSFC1(2)                        --------->LBD16            <---------HSFB2a(1)                       <---------LBD16  --------->MYB46(3)                 --------->TOE2(3)      <---------ATHB12    --------->PCF2                 --------->TOE1(3)     ------>MYB83<---------HSFC1(2)                          <-----        --------->AHL20(2)   ------------>CBF      --------->HSFB2a(1)                    ------>NtERF2   --------->TOE2(3)  <---------LBD16  ------>MYB46(1) <-----------GT1                   --------->DEAR3(1)   --------->TOE1(3)--------->MYB52(1) -------->P ------->TEIL                     ----------->TGA1   tgaaacctaaaaaaatcaagcttaaccgggaaacaattgccaaccatttacgaattttctcagtcccactatcgaagaagttgtgatgacgacgacgagg  21557300                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                               --------->LBD16                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                            --------->MYB52(1)                                            <---------DOF5.7(2)                                          <---------MYB52(1)                                          --------->DOF5.7(2)                                          ----------->HVH21                                         <-------GAMYB                                         <-----------HVH21                                     --------->ANAC58                                     --------->ANAC58           --------->DEAR3(1)                                     --------->ANAC46        --------->MYB52(1)                                   <---------ALFIN1       --------->ANAC46                                  <---------REM1(2)--------->ANAC58                                 <-----------HVH21 --------->ANAC58<---------ZAT18 ----DEAR3(1)               <-----------HVH21<---------LBD16----------->HVH21      <----------DOF2---   gcgaagtccaaattccagtctctctcagcatgtcgcttcacgccgttaccggaacccaatacctcaccgagcacttactccaagactttaccaaaaccca  21557400                --------->ANAC46                --------->ANAC58              --------->MYB52(1)             --------->DEAR3(1)             ----------->HVH21            --------->MYB46(3)            --------->DEAR3(2)          --------->ARR14(2)          <---------ARR14(2)        <------NtERF2       --------->LBD16                           <---------bZIP60(1)         <-----------HVH21   <---       --------->HSFB2a(2)    <---------ALFIN1   --------->YAB1          <---------ARR14(2)  <------MYB46(1)       ------>NtERF2       --------->ANAC46      --------->bZIP60(1)     --------->ARR14(2)  <------MYB83      <---------LBD16 <----------DOF2          <-----------HVH21       ---------->DOF2      <--------      --------->LBD16--------->HSFB2a(1)    <---------At4g35610    --------->TOE2(3)        ---------     <---------LBD16 <---------HSFC1(2)     --------->At4g35610    --------->TOE1(3)      <---------MYB52(1)   --------->ANAC46  --------->HSFC1(2)     --------->ZAT2   --------->YAB1 --------->ANAC55(2) <----  ------>ZmHOX2a(1)  <---------HSFB2a(1) <---------MYB52(1) <---------ATHB12<---------ANAC55(2)<----- ------>ARR14(2)--------->ANAC58   <---------MYB52(1)     --------->WOX13(1)--------->ANAC46<--------   attcctcgccgggaaccgacggaactttcccaacaccgtttcccttagctgtcatcactccaatcaaaaccctaaaatccgtcacattatccgattggtg  21557500       ---------->DOF2           <---------ARR14(2)                                         ---------   ---------->DOF2               --------->ARR14(2) ----------->RAV1(2)                    <--------- ---NtERF2                  ---------->DOF2         --------->At4g35610                ---------->DOF2 -MYB46(3)        --------->CCA1(2)                 <---------At4g35610             --------->TOE2(3) >MYB55(2)       <---------ARR11(3)          <-----------RAV1(1)                --------->KAN4(1)  -- -----MYB46(3)   --------->ARR11(3)          ===================RAV             <---------KAN4(1)  <- ----RAP2.6(2) --------->ICU4 <---------TOE2(3)    ------->TEIL                <---------KAN4(2)   -- -AtMYB61      ----------->ARR10<------ZmHOX2a(1)<-------TEIL                <------ZmHOX2a(1)    ---   gctaacaaagaaaggcaaagatttgtgtattaaaggattcgaatcaaatggtgcatctggagtaagactgttttcatcaggaacaatctcaaagcgacat  21557600 -->RAV1(1) -ID1         --------->ANAC58 ------------->AtSPL3                                                                      <---------TOE1(3) --------------AtSPL8                                        ------>ZmHOX2a(2)             <---------TOE2(3) ------------->AtSPL8--------->ATHB12                   <---------ATHB12             <---------YAB1 ------->DOF2 --------->ANAC58 <---------YAB1         --------->WOX13(1)      ----------->GT1   gaaagtacaactcttgaagcaattgatgggattacaatttctatcaatggtttcatcaatcgatctcgttgtctagagaatggtatttcgattgaggttt  21557700                              <---------------------WRI1                            <---------WOX13(1)                          --------->ATHB12                                                   <-------                      ------>ZmHOX2a(1)                                                      --------                 <---------GLK1(1)                                                          ---------                 --------->GLK1(1)                    ------------------------>ANAC81      <---------YAB1              <---------TOE1(3)                    >>>>>>>>>TBF1    >>>>>>>>>TBF1   <---------ANAC46=              <---------TOE2(3)                 >>>>>>>>>TBF1    >>>>>>>>>TBF1      <---------ANAC58-        <---------ANAC46 <---------YAB1    <---------ATHB12   >>>>>>>>>TBF1         <---------ANAC58=   gtaatcgttttcgtttagggtttccttatgattgggaagattacaatgaagaagaagaagagaagaagaagaagaatgttgatatttcgtttgatgatat  21557800  Previous    Next  AGI:  At1g58210.1    Description:  EMB1674 (EMBRYO DEFECTIVE 1674). similar to kinase interacting family protein [Arabidopsis thaliana] (TAIR:AT1G09720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61601.1); contains InterPro domain KIP1-like (InterPro:IPR011684); contains InterPro domain SANT associated (InterPro:IPR015216) Range:  from: 21557286    to: 21561721    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version