Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ATHB12                                                                  <---------YAB1                                                         xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        --------->ALFIN1                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                       <------ZmHOX2a(1)                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                     <---------TOE2(3)                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               <---------YAB1   <---------At4g35610                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          xxxxxxxxxxxxxx                                  --------->ARR11(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <---                                  --------->GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxx                             ---------->DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)        --------->GLK1(2)                     --------->KAN4(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------GLK1(2)                    <---------KAN4(1)   --------->ARR11(3) --------->ALFIN1        <---------HSFC1(1)                    --------->KAN4(1)   <---------GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <-----                  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <----------DOF2            --------->ARR11(3)<---------TOE2(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->HSFB2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->HSFC1(1)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ARR11(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <----- -------->TOE2(3) <---------GLK1(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <---------HSFB2a(2)   tacattattcaaattatctagattattctattaaagtatctagatttttatgtttaaggaggtggaagatgattgtagaaaatttctagaatcttttaag  21533400                                                          <---------ICU4                                                          --------->ATHB51                                                          <---------AHL20(2)                                                          --------->ATHB12                                                          -------->ATHB1                                                          -------->HAHB4      <--------ATHB1                                                         --------->ICU4       <---------ICU4                                                         <---------YAB1       --------->ATHB51                                                      --------->AHL20(1)      <--------HAHB4                                                      <---------AHL20(1)      --------->YAB1                                                      --------->AHL20(2)     --------->AHL20(2)                                                   --------->ATHB51          --------->ICU4                                                   <---------ICU4            <---------ATHB51                                                   <--------HAHB4            <---------ATHB12           --------->YAB1                         --------->ICU4   <------------CBF          <---------YAB1                          <---------YAB1  --------->ATHB12        --------->YAB1                          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->ICU4                           xxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->AHL20(2) xxxxxxxx>smallRNA(si3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---ZmHOX2a(1)      ---------->DOF2           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxx>smallRNA(i2)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------AHL20(2) ----TOE1(3)<---------ARR11(3)         ----------->ARR10 <---------ATHB51------------>CBF xxxxxxx>smallRNA(i2)  XXXXXXXXXXXXXXXXXXXXXXX>MIR163 <---------AHL20(2) ------>ZmHOX2a(2) ----TOE2(3)--------->ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------WOX13(1)   gagatggaaatgatgatatttctaaagaaaactttagaacttagatttggccataattaattattggataattgatccaataattaaacttttgaatcaa  21533500                                               <---------ANAC58                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC55(1)                                           --------->GLK1(1)                                           <---------GLK1(1)                                          --------->MYB52(2)                                      <---------O2                                      <---------ANAC46                                      --------->O2                                      --------->TGA1a           --------->ZAT14                                      <---------bZIP60(1)     --------->ZAT6                        <                                      <---------TGA1a         --------->ANAC46                  <----                     <---------YAB1--------->ANAC46       ------>ZmHOX2a(1)  <---------REM1(1)  <----           <---------ARR11(3)     --------->SPL7--------->LBD16 <---------ZAT14           <---------AHL20(2) <-----------GT1  <---------YAB1--------->TOE1(2)  <---------CCA1(2)       <---------ANAC46     <----   gtttaactttcaacatatttctgattatttggagcatacgacgtgagttccgtctatctccttcactctactgattttggtgtagcccttgtttatttgc  21533600                                                                                         --------->DEAR3(1)                                                                                        <---------LBD16                                                                                      --------->ARR14(2)                                                                                   <---------ALFIN1                             --------->AHL20(2)                               <---------ATERF1(1)                             ----------->TBP                                  ------>NtERF2                            --------->AHL20(1)                               --------->DEAR3(1)     <                            <---------AHL20(1)                          --------->ARR11(3)<---------ATERF1(1)        <----------DOF2    --------->AHL20(2)                           <-----------ARR10--------->ANAC46    <---------CCA1(2)  ----------->TBP                           ------>MYB46(1) ------>NtERF2 <----- ---------YAB1         --------->AHL20(2)    ---------->DOF2     ------>MYB83--------->ANAC46------>NtERF2 -----ANAC58        ------>ZmHOX2a(2)      --------->YAB1      --------->AtMYB61--------->DEAR3(1)--- -----ANAC58   ------>ZmHOX2a(2)          <---------YAB1 --------->AtMYB61  <---------LBD16 --------- -----ANAC46  <---------At4g35610<-----------GT1    <---------ATERF1(1) <---------ARR11(3)------>NtERF2   ttatgtttatcttttgatctgatctataaatatatatacaggttatcaaaaggcctccaccaaaaccaactcaacatctccgcctccatctccgcctcca  21533700         --------->GLK1(1)     ------>NtERF2     --------->LBD16     <------NtERF2    --------->DEAR3(1)  --------->LBD16                                                  <---------ANAC46  ------>NtERF2                                                    <---------ANAC58  <---------ATERF1(1)                  ---------->DOF2             <---------ANAC58             <---- --------->ANAC46             <---------------AtSPL3          --------->ANAC46                  <---- --------->DEAR3(1)           --------------->AtSPL8    --------->LBD16                     --------- ---------LBD16               <---------------AtSPL8   --------->HSFB2a(2)                  <-------- ----ALFIN1  --------->HSFB2a(2)    --------->TOE1(3)  <---------HSFB2a(2)           --------->SPL7 ------>ARR14(2)          <------------CBF        <----------DOF2 <-------TEIL     <---------SPL7 >DEAR3(1)   <---------HSFB2a(2)    --------->TOE2(3) <---------LBD16        <---------YAB1 <--------   tctccgccgcgagttccagacgctcaagaattggagtaccttaaatccgactcttttcccgaacacgatgcgtagagttgtcattcggacggaggtgtgc  21533800                         <------NtERF2                       <------NtERF2                      ------>NtERF2                      <------NtERF2                      <---------At4g35610                      <---------LBD16                      --------->LBD16                     --------->DEAR3(1)                     <---------ATERF1(1)                    --------->ATERF1(1)                   --------->ABI4(1)   <---------HSFB2a(2)                <----------CDC5                   ------>NtERF2       --------->HSFB2a(2)               <---------At4g35610                  ------->GAMYB  <---------ARR11(3)                      --------->At4g35610                  --------->DEAR3(1)   --------->HSFC1(1)               <---------DEAR3(1)      <---------AHL20(2)------>NtERF2  <---------------AGL15     --------->ANAC58     --------->AHL20(2)<---------DEAR3(1)                        --------->ANAC58 -----ANAC58     --------->DEAR3(2)    <---------HSFC1(1)       --------->SPL7 -----ANAC58     --------->MYB46(3)    --------------->AGL15 --------->LBD16                   ------ >ALFIN1        -------->P       --------->ARR11(3)         --------->HSFB2a(2)      ------>ZmHOX2a(1) -ANAC58        <---------ATERF1(1)   <-----------------AGL2<---------HSFB2a(2)      <----------DOF2 -ANAC58   --------->MYB59 <----------DOF2                 <---------LBD16<------NtERF2        <-----   gttccgataaaattaggctaccgccgcggctttcagaccttctagaattggagaaattgtttcccgaacgcgaggcgctgagttgtcctttggacggaga  21533900                                                                                           --------->ALFIN1                                                                                         <---------O2                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                        ------>NtERF2                                                                                      <---------DEAR3(1)                                                                                     <---------LBD16                                                                                     <-------MYC3                                                                                     ------->MYC3                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                    <---------TGA1a                                                                                    --------->O2                                   --------->HSFB2a(2)                              --------->ANAC58            ------->TEIL      <---------MYB46(3)                                    --------->ANAC46         <---------ATHB12   <---------MYB52(1)                                      --------->ANAC58  <---------ARR14(2)       --------->At4g35610                        <---------ARR11(3)<------NtERF2  --------->ARR14(2)       <------NtERF2            <---------------AtSPL8       --------->ARR14(2) <------ZmHOX2a(1)         <---------At4g35610      --------------->AtSPL8       <---------ARR14(2) --->At4g35610            <---------MYB46(3)        --------------->AtSPL3     --------->ANAC46    <- ----At4g35610       --------->SPL7<---------HSFB2a(2)  --------->ZAT18    <-----------GT1 <------NtERF2   tgaggattccaatgaacttaggctacggccgctggttccagacgctcaagaatggaagtaccctaaatccaagttatttcccagacacgcggcgtggagt  21534000                                 <---------ANAC46                                 <---------ANAC58                                 <---------ANAC58                               <------NtERF2                             ----------->HVH21                            --------->ATERF1(1)                            <-------GAMYB                           <---------ATERF1(1)                           <---------DEAR4(2)                           <---------MYB46(3)                          <---------DEAR3(1)                          <---------DREB2C(2)                         <------NtERF2                         --------->ATERF1(1)                      --------->ATERF1(1)                    --------->ALFIN1                       <---------ANAC46                 <---------AtMYB61                    ---------->DOF2           --------->ALFIN1<---------ORA47(2)       --------->AHL20(2)                            ---           <---------AtMYB61<------NtERF2         ----------->GT1                                 ---           <---------DEAR3(1)--------->ALFIN1    --------->DAG2                                   <--          <------NtERF2<---------DEAR3(1)<-----------GT1 <---------LBD16                      <------        --------->ALFIN1 <---------ABI4(1)      ---------->DOF2                           <------ZmHOX2a(1)        <---------DEAR3(1)--------->ALFIN1 --------------->AGL15                  <------ZmHOX2a(1) --------YAB1 --------->ALFIN1------>NtERF2<---------------AGL15               <------ZmHOX2a(1) <---   tgtcattcgggcggaggtggaggtggaggcggtggccgtgtatttacaaataaagtaaatgcggtagaagaattcaacttaggaggactgaaggacagcg  21534100              --------->LBD16            <-----------------AGL1            ----------------->AGL1          --------->GLK1(2)                                                      <-----------RAV1(1)          <---------ARR14(2)                                          <---------AHL20(2)          --------->ARR14(2)                                          <---------YAB1       <---------YAB1                                                --------->AHL20(2)    --------->GLK1(2)                                       --------->LBD16      <---------MYB46(3)    --------->ARR14(2)                                     <---------HSFB2a(2) --------->ZAT14    <---------ARR14(2)                           <---------GLK1(1)   <---------AHL20(2)       <------ ------>ARR14(2)                                 --------->GLK1(1)  --------->YAB1<-------GAMYB ------>GLK1(2)          <----------DOF2     <---------TOE2(3)--------->YAB1   <---------ZAT14------- -------ARR14(2)     <---------ZAT18      <---------YAB1   --------->HSFB2a(2) <---------At4g35610 ---At4g35610<---------ANAC46          <---------YAB1  <---------GLK1(1)    <---------At5g28300 ------ARR14(1) --------->REM1(2)    <----------DOF2   --------->GLK1(1)   <-----------GT1   <-------   aatccgattccgattccgagtagggaacttttaaaacaactttgattatggatttcgatatccagaataattttaattcactgctgttggacttgattaa  21534200                                                <----------DOF2                                                --------------------->WRI1                                               <---------ANAC58                                         <---------ALFIN1                                        --------->ZAT14          --------->MYB52(1)           <---------ALFIN1       <---------ANAC55(2)             --------->AtMYB61       --------->ANAC55(2)          --------->AtMYB61                              <---------TOE2(3)   <-----------HVH21           --------->SPL7  <---------ANAC58                  <---------AHL20(2)  ------>ZmHOX2a(1)        --------------->AtSPL8   <---------ANAC58          --------->YAB1 ---AHL20(2)               <---------------AtSPL3   <---------ANAC58         <---------AHL20(2) -->AHL20(2)           <-----------GT1--------->ANAC46                   <---------YAB1  <---------At4g35610 --WOX13(1)      <---------AtMYB61 --------->MYB46(3)    <-----------HVH21  --------->AHL20(2)   tttcctatcacataacgttttggtttaactttgtacgaccaccacacttgctttgctcgtgtcatccacagttttatttttaataaatgttatctgctat  21534300  Previous    Next  AGI:  At1g58150.1    Description:  unknown protein Range:  from: 21533768    to: 21534123    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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