Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>ZmHOX2a(2)                                                                          --------->CCA1(2)                                                                          <---------At4g35610                                                                          <------ZmHOX2a(2)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                         --------->ARR14(2)                                                                         --------->AGP1                                                   <<<<<<<GRF7--------->At5g28300                                       <-----------GT1    --------->MYB52(1)                              --------->ANAC58   ----------->HVH21       <---------ARR14(2)                              --------->ANAC58 <---------AtLEC2          <---------AGP1                           <---------At4g35610 <---------ANAC58        ----------->ARR10 --------->ATHB12        --------->ZAT6     --------->ZAT2      <---------ANAC58  ---------->DOF2      <-----------GT1 -->REM1(1)        ------>ZmHOX2a(2) <-----------HVH21    ----------->RAV1(1)       <---------AHL20(2)   caagtttctaacactctgtgatcccttggagctagccattgtcacccttgcctgacaaaacaacagtaaaagatagatctgactatttaaaccattgcat  21521100                                                                                       ------>MYB46(1)                                                                                       ------>MYB83                                                                                     --------->TOE2(3)               --------->ARR11(3)                                       --------->ANAC58            <               <---------ARR11(1)       ------>ZmHOX2a(1)               --------->ANAC58           --              <---------CCA1(2) <---------MYB59                         --------->ANAC46    <--------      --------->ANAC46  <---------TOE1(3)                <---------ARR14(2)          <---------MYB59-    ----------->RAV1(1) <---------TOE2(3)                --------->ARR14(2)--------->WOX13(1)<-------   caaaacccacaaaatcaaatctttttaagcttggcctaactcctaagaactcagtagcagatttagaacaaaacaagcaatccaaaacctaattaagcta  21521200                <------MYB46(1)                                                                  ----           --------->DAG2                                                                       <----       <------ZmHOX2a(1)                                                                        -----     <---------TOE2(3)                                                                  ---------->DOF2 ---------------AtSPL8                          --------->MYB46(3)               ----------->HVH21 -------->DOF2  <------MYB83                  ----------->RAV1(1)              --------->At4g35610 -TOE2(3) ---------->DOF2  --------->TOE2(3) <----------ID1                    <---------At4g35610 -------->DAG2  ----------->GT1            --------->AtLEC2                  --------->DAG2<---------At4g35610 --At4g35610   --------->MYB59         <------ZmHOX2a(2)                    ---------->DOF2--------->At4g35610   ataaagtaaggaaaaagttggtaacaaaacatcaaacacagatcaatgcaacaaatctatagagcctaaaatgttttataaagctgacactgaagcagaa  21521300                                                                   --------->YAB1                                                                 <---------TOE2(3)                                                                 <---------YAB1                                                                --------->YAB1                                                                --------->AHL20(2)         ----------------->AGL1                               <---------YAB1      --------->WRKY12                                 <----------DOF2      ----------->HVH21                               <---------ANAC58    <---------At4g35610                            <---------MYB52(1)   --------->YAB1    --------->At4g35610                 --------->AtLEC2   <---------YAB1--------->TOE2(3)      ----- ----->ZAT6                ----------------->AGL1 <-------GAMYB <---------AHL20(2)  ---------->DOF2 -----ZAT14                <-----------------AGL1 <---------At4g35610  <---------TOE2(3)        ----- ---->ZAT14          -------->P     <-----------HVH21 <---------ANAC58 <---------YAB1           -----   cactatagctgaccaattcagacaaccagaccagaacaggtcatccaaattcagttgctttcttattaatattaacataaacacataaaagcgattacaa  21521400                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             --------                                                                                             <-------                                                                                             ------->GAMYB                                                                                            ---------                                                                                           -------->P                                                                                           --------->ANAC58                                                                                         <---------MYB111(2)                                                                                         --------->MYB46(3)                                                                                        <---------At4g35610                                                                                       --------->ANAC58                                                                                       --------->ANAC46           <-----------GT1 ---------->DOF2                                             --------->ANAC58  <-----------GT1         --------->YAB1                           <-----------GT1    <---------HSFB2a(2) ---->ANAC46             <---------ATHB12                      <----------DOF2        --------->HSFB2a(2) ---->ANAC58        --------->At4g35610               <---------ATHB12       <---------ALFIN1*TSS ---->ANAC58        <---------At4g35610             --------->WOX13(1) <---------At4g35610 --------->ANAC58   gaaataaccattttttcatttcagctaatcaaagtttttcttactcatccaagttaatcaataagcttttttcatcttcccacattttccagcaaccaaa  21521500                                                 ----------->GT1                                                 --------->ANAC58         --------->HSFB2a(2)                                                 --------->ANAC58    <----------DOF2                                            --------->DAG2          <---------------AGL15                                          ---------->DOF2           --------------->AGL15                                        ----------->TBP            <-----------------AGL2                                      ===============================================MADS_MADS                                      <---------------AGL15        <-----------------AGL3                                      --------------->AGL15        ----------------->AGL1 <---------ZAT14                      ==============================================MADS_MADS <---------ZAT18                     ----------------->AGL3        ----------------->AGL3 --------->ZAT14                     <-----------------AGL3        ----------------->AG --------->GLK1(2) --->MYB52(1)                        ----------------->AGL2        ----------------->AGL2 >MYB46(1)                         --------->GLK1(2)             <-----------GT1    --------->YAB1 >MYB83               --------->YAB1 <-----------------AGL2 ---------->DOF2        <---------YAB1 ->AtMYB61            ----------->GT1================================================MADS_MADS --MYB59            <------------CBF ===============================================MADS_MADS >MYB46(3)    ----------->GT1     <---------GLK1(2)      --------->YAB1   <---------HSFB2a(2)   cagtgaacacatcaagtagtaaaattgtaatatcaagaatctataaaaggcaagtaaaatcagaaagtttccttttttagaaactatgagaatcagatag  21521600                  ------>ZmHOX2a(1)         <-------TEIL       --------->ARR14(2)                   <-----------GT1                                 <------ZmHOX2a(2)       <---------GLK1(2)             <---------WOX13(1)                                    --------->ARR14(2)       <---------ARR14(2)          <---------ICU4                           -------->P     <---------ARR14(2)   <-------TEIL   <---------YAB1   --------->ATHB12                        --------->MYB52(1)    ----  --------->CCA1(2)             --------->YAB1                    <----------ID1          --------->At4g35610 --------->ARR14(2)            <---------YAB1  <----------DOF2  >>>>>>>>>TBF1     <<<<<<<<<<AtWER<--- <---------ARR14(2)<---------ICU4 <---------YAB1         ---------->DOF2 <---------MYB52(2)--------->AGP1   acagatacagattcgtcttcctgattacaagttttgataattgattctactttccaacttaaagaagaagaacaaactaaccagttggagacagatccaa  21521700                                                               ------>ZmHOX2a(2)                                                               =============================HOX2a_HOX2a                                                              ==============================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                                                             <-----------ARR10                                                             --------->ARR14(3)                                                             <---------ARR14(2)                                                             --------->ARR11(3)                                                             <---------ARR14(3)                                                             --------->ARR14(2)                                          <---------ANAC46   <---------ARR11(3)                                        --------->LBD16      --------->AGP1                                        ------>NtERF2       --------->GLK1(1)                                   --------->GLK1(1)     --------->LBD16                                   <---------GLK1(1)   <---------LBD16                         ------                      <---------At4g35610 <---------ANAC58  <---------GLK1(1)                 <------ ----->ARR14(2)       --------->At4g35610 <---------ANAC58 ----------->ARR10         <------ZmHOX2a(1) ------ARR14(2)      --------->GLK1(2)<---------LBD16<---------ALFIN1       <---------YAB1 >>>>>>>>>TBF1   atcggagaaatttcagaaaacagaagctgaaaatgagaactccggcttgtttcttccaccggagatcttctctgtcttatcgttgaaggagaagaagaat  21521800                                                                ---------->DOF2                                                       ----------->GT1                   <---------DAG2                                  <---------LBD16    ---------->DOF2                   <---------ARR11(3) --->GLK1(2)                   >>>>>>>>>SARD1     ------>ZmHOX2a(1)                    --------->ARR11(3) ---GLK1(2)                    >>>>>>>>>CBP60g   --------->TOE2(3)         <----------DOF2<----------DOF2   ctctattgactaagagaagggtgatagagagaaatttgggggaatttaagtccttaaaagtaaaataaaagccttctcttttgtcttaagaccttttgtt  21521900                                                                                   <---------YAB1                                                                              <---------GLK1(2)                                                                              --------->ARR14(2)                                                <---------AHL20(2)            <---------ARR14(2)                                                <---------YAB1              --------->LBD16                                             <---------AHL20(2)           <---------At4g35610                                          --------->AHL20(1)              <---------LBD16                                          --------->AHL20(2)             <---------ANAC46               --------->AHL20(2)         <---------ARR11(3)      --------->AHL20(2)               <---------AHL20(2)         <---------AHL20(1)      <---------AHL20(2)     <----------DOF2                <-----------GT1        --------->LBD16--------->LBD16     <---------DAG2               <----------DOF2       -------->ZAP1   <---------LBD16  ---------->DOF2   tttcttacttttagtatttaaaaatagtctcaaatactttacaatattttataatttgaccccgatgtttaatttccgcggatttttgattcaaagttca  21522000  Previous    Next  AGI:  At1g58110.1    Description:  bZIP family transcription factor. similar to bZIP family transcription factor [Arabidopsis thaliana] (TAIR:AT1G35490.1); similar to unknown [Populus trichocarpa] (GB:ABK95886.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 21519139    to: 21521493    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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