Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->At5g28300                             --------->AHL20(1)      ----------->GT1                             --------->AHL20(2)  --------->YAB1                             <---------AHL20(1) <---------ATHB12         --------->ANAC58                             <---------AHL20(2)--------->ANAC58      --------->CCA1(2)                          <---------AHL20(2)   --------->ANAC58   --------->ANAC58 -------->GT1     <---------MYB52(1)     <-----------GT1          --------->ANAC46                  < ----->DAG2      ------>ZmHOX2a(1)   <---------AHL20(2)           --------->ANAC58 ------->TEIL     - ----->DOF2      <----------DOF2     --------->AHL20(2)    --------->ZAT6--------->ANAC58  ------->GAMYB   aagtgaatttgtctaaatcctttagtataaatttattgtttaattacacaatcaacagtgaatactacaagacacgagcaatttgcatcttaaccccaag  21513800                                                      ----------->GT1                          ------                                             --------->ARR14(2)                               <------                                             <---------ARR14(2)                               -------                                            ------>MYB83                                     <-------                                          ------->GAMYB                                      --------               ------>ZmHOX2a(1)          <---------MYB59                                  --------->bZIP60(1)              --------->TOE2(3)         --------->ANAC58                                   <---------bZIP60(1)              <---------ANAC46          --------->ANAC58                  ---------->DOF2  --------->TGA2(1) ---------GLK1(1)                     --------->MYB46(3)          ---------->CDC5          <---------TGA2(1) -------->GLK1(1)           ---------->DOF2 ------>MYB46(1)    <---------At4g35610  ----------->TBP   agaattccacatcgttccttatatatactctaaagtctaaacaaccaaattcgatttagtaattaagctcatcgctaaaagaacatatatatgacatcat  21513900                                                                                 <---------MYB59                                                                                 <---------DAG2                                                                                 --------->TOE1(3)                                                                                <---------HSFB2a(1)                                                                                --------->HSFB2a(1)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                           --------->ANAC58                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC55(2)                                                                         --------->MYB52(1)     <----   <---------TOE2(3)              <---------ANAC55(2)                    <-----------GT1       ------ --->TOE2(3)                      --------->O2                         <---------MYB52(2)  ---------- ---ICU4    <------------CBF      --------->ANAC55(2)             --------->ANAC58    <---------ANAC58 -->ATHB12<---------YAB1          <---------O2                    --------->ANAC58    <---------ANAC58 --YAB1  <---------AHL20(2)       --------->ANAC46              <------ZmHOX2a(1)--------->TOE2(3)<-- ->ICU4 --------->YAB1      <------ZmHOX2a(1)         ----------------->AGL3------->GAMYB <---------ANAC46   tagttatggattataattgtatgtctattaggaatcacgagacacgagtagagggcttcaaatataggaagcaaataacggaaccttaccttgcggttta  21514000             <---------ANAC46             <------MYB83            --------->MYB59            <---------MYB46(3)            --------->MYB46(2)            --------->MYB111(2)            <---------AtMYB61            --------->MYB111(1)            --------->MYB55(2)           <---------MYB55(1)          <---------MYB52(1)         <---------SPL7         <---------RAP2.6(3)        <---------MYB46(3)                                                          <-----------GT1     <---------SPL7               <---------YAB1                               <------------CBF     ------>NtERF2                <---------AHL20(2)                          -------->HAHB4     <---------ATERF1(1)       <---------AHL20(1)                             --------->ATHB51    <---------ATERF1(2)        --------->AHL20(1)                             <---------ICU4    <---------RAP2.6(2)     --------->YAB1                                    <--------ATHB1    --------->ATERF1(2)     <---------AHL20(2)                               --------->ICU4    <---------DEAR3(1)     <---------ATHB12                                  <---------ATHB51   --------->ATERF1(1)   --------->WOX13(1)                       <---------ANAC55(2) -----AHL20(2)         ------------>CBF                  <-----------GT1     <---------AHL20(2) --->AHL20(2)<------MYB46(1)--------->AHL20(2)      ----------->TBP          --------->AHL20(2) ->GT1<------NtERF2  --------->ANAC58               --------->AHL20(2)   --------->AHL20(2) ----------CBF       --------->ANAC58             <----------DOF2 <---------YAB1 <---------ICU4  ----   aattggccggccgtttggtagacgagccaattatatattattctcaaatattctttatataacatattacgaaaatgaaataattgttactctatctatg  21514100                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                <----                  <---------ANAC58                                                              -----              <------------CBF                                                                  <----   <---------AHL20(2)                                                                           -----  --------->AHL20(2)                                ------->GAMYB                               <----  --------->ARR11(3)                               --------->MYB46(3)              --------->DAG2<---  --------->AHL20(1)                              -------->P                      ---------->DOF2----  <---------ARR11(3)                              ------>MYB46(1)            <------NtERF2      -----  <---------AHL20(1)                    --------->MYB52(1)            --------->MYB52(1)      -------  <---------AHL20(2)                 --------->TOE2(3)             --------->TOE1(3) --------->HSFC1(2) --------->AHL20(2)         ---------->DOF2       ------>MYB83     --------->TOE2(3) <---------HSFC1(2) ----->AHL20(2)   <---------ANAC58   --------->TOE1(3)    ---------->DOF2  <---------ANAC46 <--------   taaatatattttcttccattgcttcattttcaaagaaaaccctaatggttccaaccaaaaaaaagaaaaccctaatggtgtcgaaaaagcttccattaga  21514200          <---------GLK1(2)          --------->ARR11(3)        ----------->ARR10 ------->HSFB2a(2) --------HSFB2a(2)                                      <---------MYB52(1) --->ZmHOX2a(2)                                      ------>ZmHOX2a(2) -----AGP1--------->ARR14(2)                         <-------TEIL ---->AGP1<---------ARR14(2)                       --------->ARR14(2) -----ARR14(2)                                     <---------GLK1(2) ---->ARR14(2)                                     <---------ARR14(2) -----ARR11(3)                                     --------->AGP1 ---ZmHOX2a(2)                                    <---------At4g35610 ----->CCA1(2)                                <-----------HVH21 ---->ARR11(3)            <---------ALFIN1 --------->MYB52(2)                        --------->YAB1 ---->ARR10     <----------DOF2    ------>ZmHOX2a(2)<------ZmHOX2a(2)        <----------DOF2 -MYB52(1)<---------ARR11(3)     XXXXXXXXXXXXXXXXXXXX>MIR837-5P         <---------ALFIN1       <-----   tctggaagaagagatactctttcgagttccacctcgatctctcgttcgcttcagatccgtttgcagagaatggaacactcttttcaagaataagagattc  21514300                       <------NtERF2                      <---------DEAR3(2)                     <---------DEAR3(1)                     <---------ETT(2)                    --------->ATERF1(1)                    --------->SPL7                   <-----------HVH21                 <---------ANAC58                 <---------ANAC58 ----------->GT1             <---------ANAC46     <---------YAB1                                        --------->GLK1(2)             <---------ANAC58   --------->YAB1                                         --------->GLK1(1)             <---------ANAC58  <---------ATHB12                               ---------->DOF2     --- --TEIL  <----------DOF2     --------->GLK1(1)           <---------AHL20(2)------>ZmHOX2a(2)   ------   atcaacaaaaactttgcttgcggtcggccagaaatcatgttaaatacacattcacatatttattcgataagcgtcgatctcaaagacgaaaatccaacta  21514400                                                                  --------->At5g28300                                                                 ----------->GT1                                              --------->At4g35610--------->YAB1                                           <---------YAB1--------->At4g35610     <---------ANAC55(2)               --------->At5g28300------>ZmHOX2a(2)                         -     --------->ANAC55(2)               <-------GAMYB     --------->GLK1(1)                          <     <---------ANAC58                 <---------MYB46(3) <------ZmHOX2a(2)                          <     <---------ANAC58                <------NtERF2       <---------GLK1(1)                         --     <---------ANAC46               <---------LBD16      <---------At4g35610                       <-    <-------TEIL                    --------->LBD16     --------->ARR14(2)                       <---   --------->ALFIN1 --------->YAB1  ------>NtERF2       <---------ARR14(2)               --------->YAB1 ------->DOF2    <----------DOF2  <---------RAP2.6(2)   --------->ARR11(3)               --------->TOE2(3) --->YAB1   <-----------GT1      <---------At5g28300    <---------ARR11(3)            <----------DOF2   taaaggtgcgtgatttacgctttgatcatttaagttgccgcggttatcatctgtatgggatctgcgatggtaacttcttcatgtatagctttcttaatgg  21514500           <---------ANAC46      <---------ANAC58      <---------ANAC58      <---------ANAC46     <------NtERF2   <---------DEAR3(1)  <------NtERF2  --------->ATERF1(1) <---------ATERF1(1) -------->ALFIN1 ---------DEAR3(1)                                                                     <---------YAB1 ---------ANAC46                                                          --------->ANAC58 ------->ATERF1(1)                             <---------WOX13(1)         --------->ANAC58 -----NtERF2                                  <---------ANAC58      <-------MYC3  <---------MYB46(3) ------DEAR3(1)       <---------MYB52(1)      <---------ANAC58      ------->MYC3<---------MYB52(1)   aggcggaggcgttgtttggaacccgttgttttggagacagactaaatggattgccaaggctgagaatacatgtggcaaggccattggttacgatggtagt  21514600                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                         --------->AtMYB61                                                                --------->ANAC55(2)     --------->MYB46(3)         ----------->GT1     <------ZmHOX2a(1)      --------->DAG2                     --------->ANAC58     ---------->DOF2 --------->MYB52(1)            ---------->DOF2              --------->ARR14(2)  --------->ANAC58<---------GLK1(2)             ----------->GT1 <---------ANAC55(2)    --------->ANAC58  --------->ANAC58<---------ARR11(3)           <------NtERF2   <-------TEIL     <---------ARR14(2)   agacccgaaaagagttacaagattatcggaaggagtagttgttcttggcagggtaaagttactgatacatattcagtcttcgaatttgcaaccaatgcgt  21514700  Previous    Next  AGI:  At1g58090.1    Description:  F-box family protein. Identical to Putative F-box protein At1g58090 [Arabidopsis Thaliana] (GB:Q9C6F7;GB:Q9C6R6); similar to F-box family protein-related [Arabidopsis thaliana] (TAIR:AT1G59630.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 21514175    to: 21515290    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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