Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------ATHB12   ----------->TGA1                                                                   --------->YAB1 ------>TOE2(3)                                                             --------->MYB46(3) -----ARR11(3)                               <---------ANAC46             <-----------GT1 ---->ARR11(3)                           --------->ZAT2       <---------AHL20(2)      --------->TOE2(3) ----GLK1(2)                             <---------ZAT2      <---------AHL20(2)      ----------->GT1 >YAB1                                   --------->At4g35610 --------->AHL20(2) --------->YAB1    ---   tctcaatgacgaaacatttctcagtctctaagaactaaatacaagctgagtgaagctaaacaattaaatctgagattaacaatcgcaatgttaaatctca  21510800                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                         <------NtERF2                                                                                        <------NtERF2                                                                                      --------->SPL7                                                                                      --------->ATERF1(1)                                                                                  <---------At4g35610                                                                          --------->ANAC46 <---------ZAT2                                                                          --------->MYB46(3)<--------                                                                       <---------WRKY38(1) --------->ZAT2                        --------->RAP2.6(2)                          --------->ANAC46 <---------LBD16                      --------->ZAT2------>ZmHOX2a(1)              --------->ANAC58  ------>NtERF2                      --------->At4g35610                          --------->ANAC58 <---------SPL7            --------->ATHB12        <---------------AGL15 --------->GLK1(2)       --------->At4g35610          =================================HOX2a_HOX2a    ------->TEIL <---------WRKY12<---------DEAR3(1)          <------ZmHOX2a(2)         <----------DOF2       <-----------ARR10------->GAMYB--------->LBD16         <---------ARR11(3)   --------->SPL7              --------->ARR14(2)  =======================         --------->ARR11(3)  <---------ALFIN1             <---------ARR14(2)  ----------->RAV1(1)<--- ------>ARR11(3)      <---------At4g35610   <------ZmHOX2a(1)  <-----------HVH21 ------->GAMYB <-----   gaccttgagaagatcgattgcatcagcagccatacgtcctttactaggaagaccaagacgaatctggtcacgctcaacgacaacagcggccggagcagga  21510900                                                                                        <---------ANAC46               <-------GAMYB                                                         ----------->TGA1              <-----------RAV1(1)                                                    ----------->HVH21       <---------ARR14(2)                                                         <---------TOE2(1)      <------ZmHOX2a(1)                                                           <---------TOE1(1) ----->At4g35610      <---------DEAR3(1)                                         <-------TEIL ----->ZAT2   --------->MYB52(2)                                                 --------->SPL7 ------At4g35610   ----------->HVH21                      ------>MYB83  ----------->HVH21 ---RAV1(2)   <---------MYB46(3)                          ------>MYB46(1)      <---------SPL7 ------- ===RAV--------->ARR14(2)   <----------DOF2              --------->WOX13(1)  <---------------AtSPL8 - ------ZAT2   --------->MYB55(2)                       --------->MYB46(3)------>NtERF2--------->MYB52(1) -ZmHOX2a(1)<---------MYB52(1)       --------->ALFIN1<-----------GT1    --------->DEAR3(1)   --------   gctggagaggaaccgtttgttgcgacggagctttgaacggtggagacacaagaagtaaccaatctgagacatctccgacgaggtacgatgacggagaaag  21511000                   <------ZmHOX2a(1)            <------NtERF2           --------->LBD16          <---------DEAR3(1)          <---------ANAC46       --------->ALFIN1<------MYB46(1)                                                          <----       <---------DEAR3(1)--------->ALFIN1                                                       <----      <------ZmHOX2a(1)<------MYB83                                                             ----- -->DAG2 --------->ATERF1(1)                    >>>>>>>>>TBF1                                   <---- -------->ALFIN1--------->CCA1(2)           <------ZmHOX2a(1)        <-------TEIL               <---- -->DOF2 <------NtERF2<---------AtMYB61  <------ZmHOX2a(1)    ----------->GT1     <------ZmHOX2a(1)   cggtggaaggaggcggagataggataggtgttgaagatgggaaggaggaagaagaagggtattgttgtaaattcgtagggagaaggagagacattgttgt  21511100       --------->HSFB2a(2)  <----------DOF2  <---------DAG2 <---------ANAC58                                                 ------->GAMYB               <------ <---------ANAC58                                                <---------ALFIN1          --------->GLK1(2) -------RAV1(1)                                             --------->ANAC46              --------->ARR14(2) -----ANAC58                                <---------AHL20(2)  --------->ZAT14           <---------ARR14(2) ---->ALFIN1                     --------->LBD16         --------->ANAC46                 <---------GLK1(2) -----ANAC46            <----------DOF2     --------->AHL20(2)--------->ANAC46           <---------At4g35610 -----ANAC58  ---------->DOF2  <---------LBD16   --------->MYB52(1)   <----------DOF2   ----------->ARR10   gtggcttttcgagagtgaaagggtttcttttagaccggagaaggaattatataacgaataagacacaacacactttcactctgggagaggcagattctga  21511200                                                                              <---------YAB1                                                                           --------------->AGL15                                                                           <---------------AGL15                                                                      <----------DOF2                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                    <------NtERF2                                  ----------->HVH21               <---------RAP2.6(2)     --------->GLK1(2) --------->ZAT6                          <-----------RAV1(1)     *TSS           <-----------GT1                   <------------------------ANAC81          <-----    <---------GLK1(2)<-----------GT1        <----------DOF2    <---------AtMYB61           <--------- ---YAB1           --------->AHL20(2) ------>ZmHOX2a(2)      <-----------RAV1(1)<---------AHL20(2)   ctattagattcttgatgccattttaacacttaaggcctgatccatgcttttttttttttttttttgtggtggcttttcttattttagtggaatctttatg  21511300                                              <---------REM1(1)                                              --------->ALFIN1                                            <------MYB83                                            <---------ANAC58                                ------>ZmHOX2a(2)                                            <---------ANAC46                              <---------ARR14(2)                                            <------MYB46(1)                            --------->ALFIN1                    --------->AHL20(2)     <---------MYB46(3)                        <---------ANAC46     <---------ANAC55(2)          ---------->DOF2  <------ZmHOX2a(1)                 --------->ALFIN1 ----YAB1    ---------->DOF2 ----------->GT1<---------ANAC58                      <---------DEAR3(1) -DOF2   ---------->DOF2   ----------->GT1--------->ALFIN1  ----------->RAV1(1)  <---------ORA47(1)   agaaaaaacgtgaaagaaagaattaaaaattgagaaaaaaggaagtgggtgtaggatttatgcaacatttgaagaatgaattggacggtgtggatcgaat  21511400                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                              -------                                                                                             --------                                                                                           --------->AHL20(2)                                                                                          --------->YAB1                                                                                         --------->AHL20(2)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                --------->ATHB12                 --------->AHL20(2)--                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            --------->YAB1------         <-------GAMYB                         <---------YAB1      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------MYB46(3)               xxxxxxxxxxxxxxxx>smallRNA(i)      <-----------GT1<xxxxxxxxxx        ----------->GT1         <-------TEIL  <----------DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ALFIN1  <---------------------WRI1                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ggtacaagtgtggttagaatgcgactgcgaaacatacactaagaccatctttattggaggtatttcataagagtttttcacaattaaaaaaataaaaata  21511500                                                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                      <---------YAB1                                                                    <---------ICU4                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    --------->YAB1                                                                    <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <xxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <---------ATHB12                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              --------->ANAC58                                                              --------->ANAC58    <---------At4g35610                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              --------->ANAC46    --------->At4g35610                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                            --------->REM1(1)xxxxxxxxxxxxxxxx>smallRNA(i) -------YAB1                                                --------->MYB46(3)  xxxxxxxxxxxxxxxxxxxxx ---->YAB1         <---------ZAT14         --------->GLK1(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----ICU4         --------->ZAT14--------->O2             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -->AHL20(1)      ----------->GT1 --------->TGA1a          <xxxxxxxxxxxxxxxxsmallRNA(s) --------->ATHB12 ->YAB1           --------->ALFIN1<---------TGA1a         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      < ------->YAB1    xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       - --->ICU4  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <-------- xxxxxxxxxxxsmallRNA(le3)         <---------O2  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------YAB1   atgaaaatgaagaagagagagtgtagaaagtttctcacttgagaaattctgaaatactctctacaacccatcatgacaattctcatctcactattggttc  21511600                                                 --------->YAB1                                              --------->YAB1                 --------->AHL20(2)          <---------YAB1                                         x               <---------AHL20(2)            <---------AHL20(2)                                    xx             <---------AHL20(2)             --------->AHL20(1)                                    <--            <---------ARR11(3)              <---------AHL20(2)                                    <--            <---------AHL20(2)           --------->AHL20(2)                                   xxxxxxx            <---------AHL20(1)           --------->YAB1--------->AHL20(1)                    xxxxxxxx            --------->AHL20(1)          <---------YAB1 <---------AHL20(1)              xxxxxxxxxxxxxx            --------->ARR11(3)         --------->AHL20(2)                           xxxxxxxxxxxxxxxx>smallRNA(i)            --------->AHL20(2)         <---------AHL20(2)                        xxxxxxxxxxxxxxxxxxxx     <-----------GT1             --------->YAB1  ----------->GT1               <xxxxxxxxxxxxxxxxxxxxx xx>smallRNA(s2) <---------AHL20(2)   --------->YAB1  --------->ICU4           xxxxxxxxxxxxxxxxxxxxxx ---------AHL20(2)       --------->AHL20(2) <---------AHL20(1)             <----------DOF2  <xxxxxxxx -------->AHL20(2)   <---------AHL20(2)--------->AHL20(1) <---------AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx -MYB46(3) --------->AHL20(2) --------->YAB1--------->AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   aattttttaacaaatatatttttttaatcaaataatcaaattataatataatagtaatatttttttttttggagaaactttgtgaatttctcatggatgg  21511700  Previous    Next  AGI:  At1g58080.1    Description:  ATATP-PRT1 (ATP PHOSPHORIBOSYL TRANSFERASE). similar to ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2), ATP phosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT1G09795.1); similar to chloroplast ATP phosphoribosyl transferase [Alyssum montanum] (GB:AAT74597.1); similar to chloroplast ATP phosphoribosyl transferase [Alyssum lesbiacum] (GB:AAT74589.1); contains InterPro domain Histidine biosynthesis HisG: ATP phosphoribosyltransferase; (InterPro:IPR001348); contains InterPro domain Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); contains InterPro domain Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115); contains In Range:  from: 21507979    to: 21511205    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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