Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ARR11(3)                                                                    <-----------GT1                                                                    <---------ARR11(3)                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        <---------ARR11(3)                                                        --------->ARR11(3)       --------->DAG2                                   <---------ARR14(3)      ---------->DOF2                                   --------->ARR14(3) -------->ARR14(2)          <---------ANAC58            <---------ARR14(2) ---------ARR14(2)          <---------ANAC58            <---------AGP1     --------->ETT(2) ------->ATHB12            --------->ZAT2               --------->ARR14(2)--------->HSFB2a(2) -----ZmHOX2a(1)      <------ZmHOX2a(2)                <---------CCA1(2)  <---------HSFB2a(2) -------YAB1  <----------DOF2               <----------DOF2       <---------YAB1   aggattggaaaagcagcgttttggatcagagcttgcatccatgttcctttgtattgtagatcttggttattatcttctcgacggtcttgaacatagaaga  21444100                                                                          <----------DOF2                                  ====================================HOX2a_HOX2a                                  <------ZmHOX2a(1)             --------->MYB46(3)                              --------->ZAT2                   --------->CCA1(2)                              <---------ZAT2                   <------ZmHOX2a(2)                             --------->ANAC58                 --------->AGP1 <---------YAB1                             --------->ANAC58                 --------->ARR11(3)                             --------->ANAC46                 <---------ARR14(2)                      <---------ARR14(2)                      <---------ARR11(3)                   <-                      --------->ARR14(2)                      --------->ARR14(2)         ----------->RAV1(1)                      --------->GLK1(2)                      <---------GLK1(1)      <---------At4g35610                     <---------GLK1(2)    ---------->DOF2    --------->GLK1(1)      --------->At4g35610   agttcaagagaagtatgacaagagaatctccaagcaggactaagaaaagacatattagaacagagatccaccatttcttttgatttagctgcaacagttg  21444200                                                           ---------->DOF2                                                       <---------MYB46(3)                            --------->GLK1(2)          <------MYB46(1)                           --------->ARR14(2)          <------MYB83                           <---------GLK1(2)         <---------MYB52(1)                           <---------ARR14(2)       <-------GAMYB                             <------                          <------ZmHOX2a(1)        <-----------RAV1(1)               <---------AHL20(2)    xxxxxxxxxxxxxxxx>smallRNA(i)            <---------GLK1(2)            --------->GLK1(1)  <-------- ---------DOF2         <-----------RAV1(2)<---------YAB1<-------GAMYB    <---------GLK1(1) <---------AHL20(2)   tctttggctcaagacttggtctggttcaggattctgaacatgttctgattcttctgttggttaaagaaaatttggaattctcagtttttattttttattt  21444300                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                             --------->HSFB2a(1)                                                                             <---------HSFB2a(1)                                                          <-----------RAV1(1)<---------HSFC1(2)                                                         <-------MYC3        <---------At4g35610                              <---------HSFB2a(2)        ------->MYC3        --------->HSFC1(2)                              --------->HSFB2a(2)   <---------At5g28300      <---------ZAT2                            <-----------GT1        <-----------GT1           --------->At4g35610 ---YAB1        ----------->GT1               <---------ZAT14        --------->ATHB12<---------WRKY38(1) -AHL20(2)--------->YAB1 <---------ICU4       --------->ZAT14<---------MYB46(3)    <-----------HVH21   ttaagaagacaataagaatagaaacaatttttacagaagttaagacagtgaagttaccatgtgttgttgtatgtttggaagcttcggtcatctccatgag  21444400                                                                        <---------WOX13(1)                                                                 <---------TOE2(3)                                                            -------->ATHB1                                                            <---------ICU4                                                            --------->ATHB51                                                            <--------ATHB1                                                            --------->ATHB12                                                           --------->ICU4                     --------->CCA1(2)                     <---------YAB1                    <---------ARR11(3)                     <<<<<<<<<<AGL22                    --------->ARR11(3)                     <---------ATHB51                ---------->DOF2                            <<<<<<<<<<AGL24            ------>ZmHOX2a(2)                              <---------ATHB12           --------->GLK1(1)                            ------------>ATHB5           <---------GLK1(1)                            --------------->AGL15          <---------ARR14(2)                            <---------------AGL15          <---------AGP1                             <-----------GT1   <------------CBF          --------->ARR14(2)                      <---------ARR14(2)  <--------ATHB1          --------->ARR11(3)                      --------->ARR11(3)  --------->ATHB12     ----------          <---------ARR11(3) <---------ANAC55(2)  <---------GLK1(2)   *TSS   <------ZmHOX2a(1)         <---------CCA1(2)   ----------->GT1      <---------ARR11(3) --------->ICU4     --------->AHL20(2)        <---------MYB46(3) --------->CCA1(2)      --------->ARR14(2) <---------YAB1 <-------TEIL    <-----------RAV1(1)  <<<<<<<<<RAP2.2   <---------ANAC46<<<<<<<<<<AGL20 <---------TOE2(3)   ttttctctggtggatctctaaagatttagatatgtaaatttcattccctgtagattttccaattattgagaatgattgaggagaggcacattaaacaatg  21444500                            --------->ATHB12                            --------->YAB1                            <---------ICU4                            -------->HAHB4                            <--------ATHB1                            <--------HAHB4                            --------->ATHB51                           --------->ICU4              <---------AHL20(2)              --------->AHL20(2)                                                        <------MYB83             --------->AHL20(2)                                                     <---------GLK1(2)             <---------AHL20(2)--------->YAB1                                       --------->ARR14(2)         <---------YAB1    <---------ATHB51                                       ----------->ARR10         --------->ICU4    --------->AHL20(2)                                   <------ZmHOX2a(2)      <---------ZAT6       <---------YAB1                             <----------DOF2   <------MYB46(1) --------->STY1(2)       --------->YAB1                               =================HOX2a_HOX2a <---------STY1(2)  <----------DOF2  <---------ICU4                <------ZmHOX2a(2)<---------ARR14(2) -->CBF----------->GT1  <---------YAB1                --------->ANAC46------>ZmHOX2a(1)--------->MYB59   actagctagtggtgattaaattctttataataattagaaatattactaaaacttatacaaaaccatgcgatcctttagacagatcagatttggtatactt  21444600                                                                --------->ANAC55(2)                                                                <---------ANAC55(2)                                                              --------->YAB1                                                             <---------ATHB12                                                --------->AHL20(2)                                  <                                                <---------AHL20(2)                                  -                                               <---------AHL20(2)                                ----                              --------->bZIP60(1)      ------>ZmHOX2a(1)              ------>MYB83 --                              <---------bZIP60(1)     <---------MYB59                 ------>MYB46(1)                            <------ZmHOX2a(1)  --------->AHL20(2)        --------->YAB1       <------                       ------>ZmHOX2a(1)    --------->YAB1 --------->WOX13(1)       <---------MYB59<-                 <---------AtMYB61         <---------YAB1 --------->MYB46(3)        --------->TOE2(3)   tgaaaacgactcatcagttgtggtccttgaggacatcactaggctataattttattcctaacaatcatgtattaaacataagttaacctaataaactgtc  21444700   --------->ATHB12  <---------YAB1                                                        ---------->DOF2         ----- ---------ICU4                                                      --------->ANAC58        --------- -------->YAB1                                                --------->AHL20(2)      <------ZmHOX2a(2) ----->WOX13(1)                                            --------->WOX13(1)        <---------ARR11(3) ------->ICU4                    <---------YAB1 ----------->GT1     --------->ANAC58 --------->ARR11(3) -----HVH21                      --------->AtLEC2          --------->YAB1        ---------->DOF2<---- --------ATHB12               --------->WRKY18(1)       --------->TOE2(3)    <-------TEIL  <---------AHL20(2)   aatcatgatagagactagactactcacttatggtcatgctaaaacacatattgaaaaacattaatcaaataagcaaaagtacataaagatcatttaaagc  21444800                        --------->ARR11(3)                                 ---------->DOF2                   --------->TOE2(2)                                   ----------->RAV1(1)       --------->ARR11(3)                                             --------->MYB46(3)      <---------CCA1(2) <---------ARR11(3)                       --------->HSFB2a(2) ---->ARR11(3)     --------->TOE1(2)               ----------->HVH21--------->ARR14(2)          <---- ->DOF2<---------ARR11(3)<------ZmHOX2a(2) <-----------GT1--------->ARR14(2)                  ------>MYB83 -----ARR11(3)    --------->YAB1  --------->AHL20(2)      <---------ARR14(2)                  ------>MYB46(1)   tcttatatatatctccataaacataagatcatctcataaaatagtttacatctctaacaggttccttcaagaaccacaaaagtttctcttagaaccaaat  21444900                                                                                                <----                                                                                 --------->ARR11(3)                                           <---------ARR11(3)     <---------AtLEC2         <---------ZAT6                                           --------->ARR11(3)     <---------ANAC58<------ZmHOX2a(2)           --------->ANAC46        ----------->GT1     <XXXXXXXXXXXXXXXXXXXXMIR779.1--------->TOE1(2)        --------->ZAT18          ----------->GT1     <---------ANAC58            --------->ARR14(2)        <---------ZAT18      ---------->DOF2         <---------ANAC58            <---------ARR14(2)        <-------TEIL  ---------->DOF2     --------->CCA1(1)       <---------ANAC58--------->CCA1(2) -    <---------------AtSPL8 --------->CCA1(2)        --------->ATHB12----------->HVH21      ---------- -----ATHB12      --------->At4g35610     --------->RVE1(1)  <-----------RAV1(1) <---------ARR11(3) <   caagaacaagtacacataagagctaaaagataaaagggtgaaaaatatctctcttgagtggcaatgtggcatgacatgttgaagatccaaggagagttat  21445000  Previous    Next  AGI:  At1g57980.1    Description:  purine permease-related. similar to ATPUP18 (Arabidopsis thaliana purine permease 18), purine transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G57990.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73056.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 21442897    to: 21444470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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