Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                             <------ZmHOX2a(1)                                                                                           <---------TOE2(3)                                                                                           <---------TOE1(3)   ----------->RAV1(1)                                                               ---------->ID1  --------->ANAC46                                                                 <---------MYB46(3) ----->DAG2                                   <---------TOE1(3)                  <-------GAMYB<------ ----->DOF2              <------ZmHOX2a(1)    <---------TOE2(3)                  <---------ANAC58 --AHL20(2)             ----------->GT1      ---------->DOF2                     <---------ANAC58 ->AHL20(2)          ---------->DOF2        <---------AHL20(2)         <----------DOF2<---------ANAC46 >AHL20(2)    <---------YAB1         <---------LBD16      <---------AtLEC2      <---------MYB46(3)   aagcacaacacaacttatttttaaaaaggatatatcattttcggatttaaagtttagtttgtatggtctaaaactttgtttttggttgtcgtttaggata  21380900       <------ZmHOX2a(1) -----ARR14(2) ---->ARR11(3)                                           <----------DOF2 -----ARR11(3)                                          <---------ANAC58 ----RVE1(1)                                            <---------ANAC46 --->GLK1(1)                                            <---------ANAC58 ----GLK1(1)                                       <---------bZIP60(2) -->ARR11(3)                  ------->TEIL  <----------DOF2                           <----------DOF2 ---ARR11(3)   ----------->RAV1(1)    ----------->GT1<--------P  ------->TEIL   <---------ZAT6 <-----   tcttggagaggaagaaaccacatagagacatgaatcagagaagtaactttgtgaggttgcttctacgaatttcgatgaactagtgtttctttttcttctt  21381000                                             <---------MYB52(2)                                            ------>MYB83                                          ------->GAMYB                                         <---------MYB55(2)                                         --------->MYB46(3)                                         <---------MYB52(2)                                        --------->ANAC58                                    --------->CCA1(2)                                        <<<<<<<<                              --------->CCA1(2)                                            <---------                             <---------ARR14(2)                                        --------->ARR14(2)                             --------->ARR14(2)                                        <---------ARR14(2)                     --------->ANAC58   --------->ANAC46                               <---------ARR11(3)                     --------->ANAC58   --------->ANAC58                               --------->GLK1(2)       --------->TOE2(2)     --------->ARR11(3)                                   <---------At4g35610       --------->TOE1(2)  <---------TOE2(3) ------>MYB46(1)  <---------ICU4       --------->At4g35610 -----DOF2      --------->MYB59  ----------->GT1          --------->YAB1      <-----------HVH21   tttcaacaacatgcgagtttggcacaccaaggatatggatacaaccaactaaactacatatcaaaatggccatggggaaatgtcagcaaaatctgtcaaa  21381100                                                        <---------YAB1                                                  <---------AHL20(2)                                                  <---------YAB1                                                <---------ICU4                               --------                             ----------->GT1   --------->ICU4                    --------->YAB1                         <----------DOF2 --------->ANAC46                       <---------YAB1     -- <WRKY18            <---------DAG2       --------->ANAC58                  ----------->GT1   -------- --HVH21            <----------DOF2      --------->ANAC58                ---------->DOF2  <----------   aaatgcaaaaacaaaactccaactttactttgggtaaaacaatacgctaatttttattatgttatacataaatgcaaaagttataatcgtttaaacctta  21381200                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          --------->KAN4(2)                                                         <---------KAN4(1)                                                         --------->KAN4(1)                                                         <---------HSFB2a(1)                                                         --------->HSFB2a(1)     --------->DEAR3(1)                                                         <----------TaMYB80     *TSS   --------->ANAC58                                     <---------KAN4(2)     --------->ANAC46   --------->ANAC58                                     ---------->TaMYB80 --------->ZAT14 ->TOE1(3)                                         --------->DAG2          <---------ZAT14 ------->YAB1                                     ---------->DOF2       ------>MYB46(1) ->TOE2(3)  ------>MYB46(1)                   --------->ANAC58          ------>MYB83           <----- -GT1       ------>MYB83   ---------->DOF2    --------->ANAC58       --------->DEAR3(2)   <----------   aaaataagcaaaccaaatttgacaaaaccaaaagctaaaccgaatcaaacgaaaaaggaatattctccaaaaccgacttcacacagccctaatttccaca  21381300                            ------->TEIL                            --------->ARR14(2)                            <---------ARR14(2)                           <---------CCA1(2)                      <----------DOF2                    ------>NtERF2                   --------->DEAR3(1)                   --------->RAP2.3(2)                  <------NtERF2                  --------->DEAR4(2)                  --------->ATERF1(1)                  --------->RAP2.3(1)                 ------>NtERF2                 <---------ATERF1(1)                 <---------RAP2.3(1)                <---------DEAR3(1)                <---------ATERF1(2)                --------->RAP2.3(2)                --------->RAP2.3(3)                --------->DEAR3(1)                --------->ATERF1(2)                --------->ANAC46               --------->ATERF1(1)               --------->DEAR4(2)               --------->RAP2.3(1)               --------->ERF1   --------->ZAT6--------->ABI4(1)                                                             ------ ----ALFIN1   <---------ATERF1(1)                     <---------LBD16                      --------->WOX13(1) -GT1        --------->ANAC46                <----------DOF2            ---------->DOF2 --------->GLK1(2)   ctctaatactatttctcgccgccgcttttgtatcttcttctctctcgctttgctctctcggaattgtttttgcagaaagtctctcgtaagaatcaatcta  21381400                                                                                                    <                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                      --------->CCA1(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                             <---------ANAC58        <---------AGP1 -                                                             <---------ANAC58        --------->AGP1 -                --------->ANAC46                           <-----------GT1           <---------ARR11(3)             <---------ARR14(2)                         <---------ICU4               --------->ARR11(3)      <<<<<<<<<TBF1                              --------->MYB52(1)         ----------->GT1         - --->WOX13(1)--------->ARR14(2)                  <-----------GT1         <----------DOF2            <   tcaacttcttcttcatatacgcttctctcgtttcaaaatttcatcgacgattaactgatttttacttggtgttttctttggtaactagatctgaactcag  21381500                                                                                               <-----                                                                                               <-----                                                                                           --------->ATHB12                                                                                          --------->ICU4                                                                                          <---------YAB1                                                                                      <-----------TGA1                                                                                      <-----------HVH21                                                                                     --------->ANAC46                <---------ARR11(3)                                                   <---------ANAC55(2)                --------->ARR11(3)                                                   --------->ANAC55(2)                <-----------ARR10                                                  <------ZmHOX2a(2)                --------->ARR14(2)                                                --------->ARR14(2)                <---------ARR14(2)           --------------->AtSPL8     <-------MYC3------>ZmHOX2a(2)               <---------CCA1(2)          <------MYB46(1)               ------->MYC3<-------TEIL           <---------ANAC46               <---------MYB46(3)           --------->ANAC46<---------MYB52(1)      --------->LBD16                     <------MYB83          <---------ICU4    <---------GLK1(2) ---------ARR11(3)                     <-------GAMYB           <---------YAB1     <---------ARR14(2) -------->ARR11(3)                    <---------ANAC58         <------ZmHOX2a(2)  --------->AGP1 -------->GLK1(2)                     <---------ANAC58         --------->ICU4 <---------At4g35610 -------->ARR14(2)                    <---------ANAC46        --------->ARR11(3) --------->At4g35610 ---------ARR14(2)        <---------MYB52(1)<--------P        <---------ARR11(3)----------->ARR10   <   aaaatctccgagttcgtatatcttctccgtttgagcaatggcgttggtaagtactcacttctgagatcattacacgtttcatcagatccgtcacgattgg  21381600                                                                                       <---------ANAC46                                                                                     --------->ARR11(3)                                           --------->TOE2(3)                      --------->ANAC55(2)        <-----------RAV1(1)------->TEIL  ------->TEIL                            <---------TOE2(3) -MYB83------>ZmHOX2a(2)<---------YAB1  <---------CCA1(2)                        --------->MYB59 -MYB46(1)    <---------YAB1       <-------TEIL     --------->LBD16         --------->ATHB12 -----------GT1--------->YAB1  <---------YAB1     --------->TOE1(2)        --------->ICU4   ttttactgatctgttgatgatagtttatgaattttgattcatgtatcttaaatctgggaatatagtttgattttagaatgatttaggtatcttggacgat  21381700                                                                                   <---------WOX13(1)                                                                                 --------->ATHB12                                                                                <-------TEIL                                                         <-----------GT1        <---------YAB1                                                     ------->TEIL        <---------MYB52(1)                              <---------AtLEC2  <---------AtLEC2        <-------GAMYB--------->YAB1   <---------YAB1        <-----------RAV1(1)<----------DOF2            <-----------RAV1(1)   tgtttattaatctgagaactggattttgtgttgcattgaaaaactactttggatgaatataactatgcaatttctgttgagtttcattgatgaagtttgt  21381800  Previous    Next  AGI:  At1g57720.1    Description:  elongation factor 1B-gamma, putative / eEF-1B gamma, putative. Identical to Probable elongation factor 1-gamma 2 [Arabidopsis Thaliana] (GB:Q9FVT2;GB:Q94C85); similar to elongation factor 1B-gamma, putative / eEF-1B gamma, putative [Arabidopsis thaliana] (TAIR:AT1G09640.1); similar to Os02g0220600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046318.1); similar to Os02g0220500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046317.1); similar to Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) (GB:Q6YW46); contains InterPro domain Translation elongation factor EF1B, gamma chain, conserved; (InterPro:IPR001662); contains In Range:  from: 21381280    to: 21384043    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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