Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->YAB1                                              <---------YAB1                               <---------AHL20(2)                               --------->AHL20(2)                        ----------->GT1 <---------TOE1(3)             ----------->GT1   --------->AHL20(1)         --------->GLK1(2)          ---------->DOF2     --------->AHL20(2) <---------YAB1       <---------YAB1               -- --------->ZAT6   ---------->DOF2       <---------TOE2(3) <-----------ARR10  <-----------GT1       <- -->GT1<---------ZAT6 ---------->DOF2   --------->MYB59  <---------GLK1(2)<---------ICU4    ---------   aaaacactagtggaaaggagaaaagaaagaaaattaattgtttaggttattataagagagaatctattttgtatgatttttacttctaaactaatcagaa  21358800                                                                   <---------AHL20(1)                                                                   --------->ARR11(3)              --------->TOE2(3)                                    --------->AHL20(1)              --------->TOE1(3)                                 --------->YAB1             --------->ANAC55(2)                               <---------YAB1             <---------ANAC58                    <---------AHL20(2)<---------ARR11(3)             <---------ANAC58          <---------ICU4        --------->YAB1             <---------YAB1      <---------ANAC55(2)       <---------ANAC55(2)  --------->ARR11(3)             <---------ANAC55(2) --------->ANAC55(2) <---------AHL20(2)         <---------ARR11(3) ------->ANAC55(2)              <-------TEIL    <---------ARR11(3)--------->RVE1(1) --------ANAC55(2)          <---------ICU4<-----------GT1  <---------ANAC46 ---------->DOF2 >YAB1     <-----------GT1 --------->AHL20(2)   <---------AHL20(1)--------->CCA1(1)             -----   tacttattctaaattacgttagaaacacaataaatacataatattcaccatatatttgattacttataatatcttacataaagatttagtaaaccgaata  21358900                                                          ------>MYB46(1)                                               <-----------GT1                                           <---------AHL20(2)             --------->MYB46(3)     ----                                           --------->AHL20(2)           ------>MYB46(1)        ------                                           --------->AHL20(1) <-----------GT1                  ------                                      <---------AHL20(2)  ------>MYB83<---------MYB59          ------                                      --------->AHL20(2)<---------MYB59 ------>MYB83     ---------->DOF2 ---->AHL20(2)              ----------->GT1<---------AHL20(1)--------->AHL20(2)    --------->MYB52(1)   aaacacaaacaagtttcagtttaagaagtttagttaaaattttaatattttactataaccaaattaactaaaccgaaccaattccaaaccgaaatgcaca  21359000                                                                           <----------DOF2                                                                          <---------DAG2                                                                       ------>MYB83                                                                       ------>MYB46(1)                                                                     --------->AtMYB61                                                                   ------->TEIL<-----------GT1                                                                <---------ANAC58                                                                <---------ANAC55(1)                                                                --------->ANAC55(2)                     <---------ZAT18                            <---------ANAC58    <-----------GT1  --------->ZAT18                            <---------ANAC55(2) ----->ANAC46------>MYB46(1)                ----------->GT1    --------------->AtSPL3      ---------- --->ANAC46  ------>MYB83                  ----------->GT1     --------------->AtSPL8------>ZmHOX2a(1) --->ANAC58<---------MYB46(2)         <---------REM1(1)        <---------------AtSPL3================ --->ANAC58<---------MYB59   --------->AHL20(2)    <-----------GT1 --------->SPL7    ================   caaaattaacataccaaactttgtgcccaaattatacaaaatgtaggggtaattaacaaaacaattacgtacctccccttttaactcctcaaatccaatg  21359100                     <---------ATHB12                 ------------>CBF                ----------------->AGL1                <-----------------AGL1          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        <---------AGP1        --------->ARR14(2)                                                           *TSS        --------->AGP1                                                               <---------ANAC58        --------->ARR11(3)                             <---------YAB1                <---------ANAC58        <---------ARR14(2)                         <----------DOF2        --------->TOE2(3)   <-----------GT1 --------->WOX13(1)    --------->TOE1(3)                --------->YAB1 -->CBF <---------ARR11(3)               --------->TOE2(3)  <-----------HVH21<<<<<<<<<<<<<<<<<LFY ===============HOX2a_HOX2a        --------->YAB1  <---------DAG2         --------->TOE1(3) ================HOX2a_HOX2a      <---------YAB1<-----------GT1 --------->ICU4------------>CBF      -   ggtatttacagatctatggcccaatcaggcccatttatgaaaaccctaattcactttataagtgtcatgttttttatcttaacaatggcttctctagggt  21359200                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                         <---------LBD16                                      <---------PCF2                                     <------NtERF2                                     ----------->HVH21                                    --------->LBD16                                  <---------LBD16                                  <------NtERF2                                  --------->ATERF1(1)                                 ------>NtERF2                                 <---------RAP2.6(3)                                 <---------RAP2.3(1)                                 <---------ERF1                                 <---------ATERF1(1)                                <---------RAP2.3(3)                      --------->HSFB2a(2)                                <---------DREB2C(2)                      <---------HSFB2a(2)                                <---------RAP2.3(2)                ===========================HOX2a_HOX2a                                <---------RRTF1(3)                 ------>ZmHOX2a(2)                                <---------RRTF1(2)                <------ZmHOX2a(2)                                <---------RAP2.6(2)               ============================HOX2a_HOX2a                                <---------ATERF1(2)              --------->ARR14(2)                                <---------DEAR3(1)               <---------ARR14(2)    ------>NtERF2               --------->ATERF1(2)              --------->ARR11(3)  --------->MYB46(3)           <---------LBD16 --------->ALFIN1  --------->AGP1 --------->At4g35610           --------->RAP2.6(3)               <---------ARR11(3) <---------At4g35610          --------->MYB52(1)                <---------GLK1(1)             ------- -------->ANAC46     ----------->GT1------>NtERF2               --------->GLK1(1)      <------ZmHOX2a(1)   ttcagccaccagactcaaacagagagtgaaaatgccggcgggacacggagtgagggcgagaacaagagatctgttcgcgagaccattcaggaagaagggt  21359300                                     <------NtERF2                          --------->TOE1(3)                         <---------HSFB2a(1)                         <---------HSFC1(2)                         --------->HSFC1(2)                       <---------GLK1(2) <---------ARR14(2)                  --------->TOE2(3)<---------DEAR4(1)             <---------At4g35610              <---------MYB111(2)  <---------DEAR3(1)  <---------TOE2(3)              <---------MYB111(1) <---------ORA47(1)   <---------TOE1(3) <-----------GT1-------->P--------->TOE2(3) <---------ANAC46      --------->At4g35610 ---->GT1  <---------ALFIN1      <-----------HVH21 <-----------HVH21    --------->ANAC46  <---------ICU4   tatattccactctccacttacctcagaaccttcaaggtcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagttct  21359400                                            <------MYB83                                            <------MYB46(1)                                           <---------AtMYB61                                          <---------MYB52(1)                    <---------HSFB2a(2)  <-------GAMYB               <---------YAB1                  <---------At4g35610   <---------ANAC58             --------->ICU4                  --------->At4g35610   <---------ANAC58          --------->ALFIN1            ----------------------->TaNAC69(2)              --------->MYB52(1)            <-----------HVH21      <---------ANAC58        ------->GAMYB      <---------SPL7--------->HSFB2a(2) <---------ANAC46  <---------MYB52(2)                       --    --------------->AtSPL3         <---------ANAC58       --------->MYB46(3)   <---------CCA1(2)  ---   accatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacaggtgttgattactcaaatctctaatctgtttgg  21359500         <---------MYB46(3)                                                --------->At4g35610        <---------WOX13(1)                                               --------->ZAT18       >>>>>>>>>ARR2                                                  <---------ANAC58      --------->ATHB12                                                <---------ANAC58     <---------YAB1                                                   <---------ANAC46 ------->DAG2       <---------TOE2(3)      <----------DOF2        <----------DOF2        <---------GLK1(1) ------->DOF2       <---------TOE1(3)<---------YAB1      <---------AHL20(2)<---------At4g35610   ----   aaaagttttgattgttgaaattagggtttgaatgtgattttgattctttcatttggggtttaattcgtctttgtgtgagctatctgttttgaattctgag  21359600                                                                                        <---------YAB1                                                                            --------->WOX13(1)             <---------MYB46(3)                                           <---------ATHB12    <------       <------MYB46(1)                                                   --------->ANAC58  <---------       <------MYB83            <----------DOF2                           --------->ANAC58  ----------     <---------WOX13(1)  <-------TEIL             <----------DOF2       --------->WOX13(1) <---------YAB1 ----->ARR11(3)         --------->CCA1(2)      ------>ZmHOX2a(1)  --------->MYB52(2) <---------YAB1 -   atgttggattggtattggttcgaaagattcaagcttttcttcttgggtccttcttttgctatttgtattagttgcaatcaatctactatgattcttattt  21359700  Previous    Next  AGI:  At1g57660.1    Description:  60S ribosomal protein L21 (RPL21E). Identical to 60S ribosomal protein L21-2 (RPL21F) [Arabidopsis Thaliana] (GB:Q9FDZ9); similar to 60S ribosomal protein L21 [Arabidopsis thaliana] (TAIR:AT1G57860.1); similar to 60S ribosomal protein L21, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93903.1); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Ribosomal protein L21e; (InterPro:IPR001147) Range:  from: 21359185    to: 21360202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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