Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <-----------RAV1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)         ------                                                  <---------TOE2(3) ---------->DOF2     xxxxxxxxxxxxx                                             <------MYB46(1)      <---------YAB1      <xxxxxxxxxxxxxx                                             <------MYB83    <---------ANAC58       <---------MYB59      --------->ZAT18                       --------->MYB59  <---------ANAC58       --------->TOE2(3)     <---------ANAC58                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<-----------GT1 ----     <---------ANAC58                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxx    <---------ZAT18                  <---------REM1(1)       <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxxx    --------->ZAT18--------->YAB1   --------->ARR11(3)   <---------ANAC58  ----------->GT1     xxxxxx <------------CBF <---------YAB1    <---------ARR11(3)   <---------ANAC58  <---------ANAC46   <xxxxxx   ccagattgcgctctgataccatgataaacttaagacaagatgtagtttggtttatgttgtcttgcgttattaaagaggcgttaaaaccttacttatacaa  21354600                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  --------->ALFIN1                  <-----------RAV1(1)            --------->TOE2(3)            --------->TOE1(3)--------->ANAC58      --------->CCA1(2)    --------->MYB52(1)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     --------->ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <----------ID1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  --------->At4g35610--------->ANAC58 ----->ANAC58 ---------->DOF2--------->ANAC58                --------->WRKY38(1)   <---------WRKY18(1) ---->DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->ARR11(3)      --------->ARR11(3) xxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxsmallRNA(i)--------->AHL20(1)      --------->AHL20(1) xxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  <---------AHL20(1)        <---------AHL20(2) x>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)--------->AHL20(1) --------->MYB52(1) >smallRNA(fl3)--------->DAG2--------->ANAC46<------ZmHOX2a(1)      <---------At4g35610--------->ANAC58 xxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------ZAT14<---------AHL20(1)      <---------AHL20(1)  --- xxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ICU4   --------->AHL20(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   agcaaaagatataacctaaagtgttgcacaaacgaaatgactaaacaggacaaatatatattgttgactaagctaactaaaatattgaccagcaatagct  21354700                                                                                                   --                                                                                                -----                                                                                                <----                                                                         <---------MYB52(1)     -----                                                                        --------->LBD16         <----                                                     <---------MYB46(3)<---------ANAC55(2)      <----                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                ------                                           --------->ALFIN1         --------->ARR14(2)    <---------AHL20(2)                                           <---------AtMYB61        <---------ARR14(2)    --------->AHL20(2)                  --------->YAB1    <---------PCF2<------------CBF <---------GLK1(1) ------------>CBF       <-----------GT1          ------->MYC3--------->MYB55(2) <------NtERF2   --------->ATHB12------ ------>REM1(1)<----------DOF2  <-------MYC3<---------MYB46(3) ------>NtERF2  <---------YAB1  <------   tcaacaatttcacttgcctttaatatttctaacacatgggtccgagtggttgcattggttaaggcggacaaatccgtatgttgattagacaattttttac  21354800                               --------->TCP16(1)                               --------->PCF5                              <---------TCP16(2)                             --------->ZAT18                             --------->WRKY38(1)                            --------->ALFIN1                          --------->ALFIN1                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <---------ANAC58                              <---------ANAC55(2)                          <---------ANAC58                              --------->ANAC58                          <---------ANAC46                              --------->ANAC58                       <---------AtMYB61                                --------->ANAC55(1)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                          --------->ANAC55(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->ANAC46          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <---------LBD16   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                              <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)    --------->AHL20(2)          --------->ZAT2 ----->TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <---------ZAT2 ---->ANAC55(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->ANAC58 -----ANAC58       <---------ZAT14      <---------AHL20(2)          ------>MYB46(1) ---->ANAC46      <---------ANAC58      --------->AHL20(2)          ------>MYB83 -----ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)           --------->At4g35610                 <---- -----ANAC55(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------At4g35610               <------ --------->AtSPL3 <---------ANAC58    --------->YAB1       <xxxxxxxxxxxxxxxxsmallRNA(i)   <----------DOF2 --------->AtSPL8<-------TEIL<---------ZAT18 --------->AHL20(2)     --------->ANAC58      <---------DAG2 -----GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)---------->DOF2------>ZmHOX2a(2)     <-----------GT1   gtaccagtcccaaattatgtgcgtagtggtgtggacccaaaaataaataaaagaaaaccgtgatcggaccaagcacggaacatttttaccagctttatta  21354900                                                                          <--------P                                                                          <---------MYB52(1)                                                                         --------->At5g28300                                                                     ------>NtERF2                                                                     ------------>AtMYB77                                                                    ----------->HVH21                                                                   <------NtERF2                                                                   --------->LBD16                                                                 <---------DEAR3(1)                                                                 <---------LBD16                                                               <---------SPL7                                                           <---------ANAC46                                                           <---------ANAC58                 --------->ANAC58                          <---------ANAC58            <---------------AtSPL3                         --------->O2  <-------GAMYB       --------->ZAT18                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <---------ZAT18                       ----------->GT1--------->LBD16 --------->MYB52(2)      <---------ANAC58                    <---------At4g35610--------->ALFIN1        <-------GAMYB      <---------ANAC58                   <---------AGP1    <---------O2 <---------MYB46(3)     <---------At4g35610               ---------->DOF2 <-----------HVH21<---------DEAR3(2)     --------->At4g35610    <-----------GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ----------->GT1  <---------ZAT14--------->ANAC58 ------------>CBF--------->ICU4--------->PCF5<-----------RAV1(1) -----AHL20(2) <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------At4g35610 ---YAB1------>NtERF2   <---------MYB52(1)<---------ZAT2--------->PCF5 <---------DEAR3(1)   aaactgtagcggaccaagtacggaccgtttttacataccaatagagctggtaaaaatggtcccgtggtccgcgacggttagtggtgctgttaatatttct  21355000                                                                      <---------TOE1(3)                                          <---------TOE2(2)           <---------TOE2(3)    <---------WOX13(1)                                <-----------GT1                    <<<<<<<<<MYB98         -----------                           <---------AHL20(1)           ------>ZmHOX2a(2) <---------MYB46(3)                        --------->AHL20(2)------->TEIL<---------ARR11(3) <--------P      --------->ATHB12                       <---------YAB1  <---------ANAC55(2)     <----------DOF2          <---------YAB1          --------->ZAT14  --------->AHL20(1)         --------->ARR11(3)<-------GAMYB   --------->ICU4   aacacatcaaactatactcttagtgattatatattaacaagacgtatgtataaattgatcttcttctttgttagggttgatgaaacagacatgattgaaa  21355100                                                                                                   --                                                                                               ------                                                                                               <-----                                      <-----------HVH21                                        <-----                                     --------->RAP2.3(3)                                       ------                                   --------->ZAT18          <---------At4g35610                <-----                                   <---------ZAT18          --------->At4g35610               <------                                   --------->ZAT14         --------->ANAC58              ------>ZmHOX2a(2)                                   <---------ZAT14         --------->ANAC58             <------ZmHOX2a(2)                              ---------->DOF2        ---------->DOF2                   --------->ARR14(2)                           --------->LBD16       <---------GLK1(1)                     <---------ARR14(3)             <-----------GT1 <---------GLK1(2)   --------->GLK1(1)                     <---------ARR11(3)       <----------DOF2    <---------HSFB2a(2)   <---------ARR14(2)                     <---------ARR14(2)     ------>NtERF2        --------->HSFC1(1)    --------->ARR14(2)                     --------->ARR14(3)     <---------At4g35610  --------->HSFB2a(2)   <---------ARR11(3)                     <-----------ARR10    --------->DEAR3(1) <---------ARR14(2)       --------->ARR11(3)                     --------->GLK1(2) --------->DEAR3(1)    --------->ARR14(2)      <------ZmHOX2a(1)                      <------ZmHOX2a(1) ---------->WRI1      <---------MYB52(1)  <---------------------WRI1 --------->ARR14(2)--------->ARR11(3)   acatcgccgcttatatttccagccgtttccagaatagcgcagtcatcgaggatatcaaaggaagctatccaaaacctcgttttgatgaggatcttcaaat  21355200                                                                                            =========                                                                               <---------ZAT18                                                                               <---------ZAT14                                                                            <---------DEAR3(2)                                                                           <---------DEAR3(1) --------->HSFB2a(2)                                                       <---------At1g77200 <---------HSFB2a(2)                                                       <---------DREB2C(2)    <-- ------->At4g35610                                               <---------ANAC55(2)        <------ZmHOX2a(1) --->ARR11(3)                                                    --------->ANAC55(2)    <<<<<<<<<MYB98 ------ARR10                                                   --------->AHL20(2)      <-------GAMYB ----ARR11(3)                                                  <-----------GT1 --------->ZAT14  ----- --->ARR14(2)        ---------->DOF2                   ----------->GT1     <---------DEAR4(1)   ----- ----ARR14(2)   <-----------GT1                     --------->STY1(2)     --------->DDF1<---------MYB52(1) ---CCA1(2) <----------DOF2 ----------->RAV1(2)     <---------STY1(2)    <-----------HVH21  =========   cttctgcaagtatgcttttaaccaaaagacccctgaagatggtttcgatgaactagctcgtgaaattacataccatgtcggtgaacttccgttaggacta  21355300                       <---------ANAC58                                 <---------ANAC55(2)                       <---------ANAC58                                 --------->ANAC55(2)                       <---------ARR14(2)                             ------->TEIL                   <---------LBD16                                    --------->SPL7                  <---------ANAC58                                    --------->MYB52(1)                  <---------ANAC58                                  <---------SPL7          ------>ZmHOX2a(2)                                        <---------ANAC58         <------ZmHOX2a(2)                                         <---------ANAC58         --------->PCF2--------->ARR14(2)                         --------------->AtSPL3        --------->ARR14(2)                                        <---------------AtSPL3     <-------        <---------ARR14(2)                                        --------------->AtSPL8   <---------ZAT18 ================HOX2a_HOX2a                                      <---------------AtSPL8   --------->ZAT18 -------TOE2(3)   <---------ANAC46                               <------ZmHOX2a(1)       <---------At4g35610 ---->MYB52(1) <----------DOF2                           <---------TOE1(3)        --------->ARR11(3) ----->DOF2 <---------ALFIN1             <<<<<<<<<<<<<<<<<LFY  <---------TOE2(3)  <---------ARR11(3) ===============HOX2a_HOX2a    --------->ANAC46          <---------TOE2(3)        <---------ARR14(2)   aaggttattggatcccactttcgtggattgtccaaggagcagtggccaatggaagtatcaaggttaaggacgtaccgtaatggagatattgagcgcattt  21355400                    --------->ANAC55(2)                    <---------DAG2                       <----                <---------DAG2                             <----------DOF2                      <----                <----------DOF2              --------------->AGL15                           --------           --------->YAB1           --------->ARR11(3)    <---------ANAC58                   <-------          <---------YAB1            <---------ARR11(3)    <---------ANAC58         ---------->DOF2       <---------MYB52(1)       ---------->DOF2       <---------ANAC58         --------->MYB52(1) ---DOF2--------->YAB1        --------->ARR11(3)      <---------ANAC58----------->GT1    ---------->DOF2   tgaagttcagttatgatgctttatgtgatgaagataaagatttattccttcatatagcttgctttttcaacatggaaaaaataacgaaagtgaaagaact  21355500  Previous    Next  AGI:  At1g57650.1    Description:  disease resistance protein (NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64667.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3 (InterPro:IPR011713) Range:  from: 21354956    to: 21357647    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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