Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->TOE1(3)      --------->TOE2(3)   ------->TEIL -->LBD16 --ANAC46--------->ARR14(2) --->GT1 <---------ARR14(2)    ------->GAMYB                <-------TEIL     --------->DAG2 --ANAC55(2)                ----------->RAV1(1) --------->HSFB2a(2)         ---------->DOF2 ->ANAC55(2)             <<<<<<<ZML2          --------->At4g35610   --------->YAB1             ------   aaatgtatccataacctctgcaaactagaacaacagcaatttggaaactgctggaatttacatacatctaacatagcaaaaagtttgctagattacaaaa  21316100                                                                                              <------                                                                                              -------                                                                               ======================                                                                               ------>ZmHOX2a(2)                                                                              =======================                                --------->ANAC58                              <------ZmHOX2a(2)                               --------->DAG2                                <---------ARR14(2)                              ---------->DOF2                                --------->ARR14(2)                       <---------ARR11(3)                      --------->AHL20(2)             <------MYB83                --------->TOE2(3)                        ----------->GT1     --------->ARR11(3)   ---     ------>ZmHOX2a(1) --------->ARR11(3)               --------->DAG2      <------ZmHOX2a(1) <------MYB46(1)    --------->TOE1(3)  --------->GLK1(2)               ---------->DOF2  ---------->DOF2     <--------    --------->TOE2(3) --------->RVE1(1)            <----------ID1   --------->AHL20(2)    --------->ATHB12 --->MYB52(1)----------->RAV1(1)--------->ANAC58 ---------->DOF2   --------->AHL20(2)    <---------YAB1   ctgattccttaaatacaacataaaaaatctaaaaaagcaaacattgttggaaaaagaaaaagttataaaataaaaaaaggatccagtgtttttgattggt  21316200                                                                   --------->MYB52(1)   ------>ZmHOX2a(1)                   --------->LBD16         --------->ANAC58 ---MYB46(3)                          --------->LBD16    --------->TOE2(3) ---->GT1                             <---------LBD16    --------->TOE1(3) =========HOX2a_HOX2a                <---------LBD16   <---------TOE2(3) =========HOX2a_HOX2a                <---------ANAC46  <-----------------------TaNAC69(2) ------>KAN4(2)                     <---------LBD16   --------->MYB52(1) -WOX13(1)               <---------ANAC46    ---------->DOF2   --------->ANAC58        ------->GAMYB   tattcctacttggtgagaacgtagatggcatatatcagtccggggataaaagcgaataacgttagaagcaaacagacccaaaactccaactgcaaacaca  21316300                                           <---------YAB1                                      <---------WRKY18(1)                                     --------->WRKY45                                     --------->WRKY38(1)                --------->ATHB12                                     --------->WRKY12                  <---------YAB1                                   <----------DOF2                 <---------AHL20(2)         <------                              ------>ZmHOX2a(2)                <---------AHL20(2)       <---------AHL20(2)                            <---------ARR11(3)           <-----------HVH21    <---------YAB1 <-------      <----------ID1        --------->ARR11(3)  <-----------HVH21<---------AHL20(2)     --------->AHL20(2)  ---------->DOF2       --------->CCA1(2)--------------->AGL15<---------AHL20(1)       --------->AHL20(2)   tatacaaagaaacaaaaaaacaagagatttgatcttactttgaccattaatgtcaaatgtgtcatatatttttatgatttatgaatgaaaaaaatttacc  21316400                                                              <---------At4g35610                                                              <---------HSFB2a(1)                        ------>MYB83                          --------->HSFB2a(1)                        ------>MYB46(1)                       --------->At4g35610                      --------->AtMYB61                       <---------HSFC1(2)                   --------->ANAC46                           --------->HSFC1(2)                   --------->ANAC58                          --------->ANAC58                   --------->ANAC58                      --------->ANAC58       <-----------ARR10-------->P                   --------->TOE2(3)       <---------ARR11(3)                            --------->TOE1(3)       --------->ARR14(2)   <------ZmHOX2a(1)     --------->ARR14(2)                    <---------AHL20(2)       <---------ARR14(2)<-----------RAV1(2)      <---------GLK1(2)     <---------AHL20(2)        <--      <---------CCA1(2)----------->RAV1(1)    ---------->DOF2--------->ANAC58          --------->AHL20(2) ---At5g28300    <---------ALFIN1         --------->ZAT18--------->ANAC58              <---------AHL20(2) ----GT1      <------ZmHOX2a(1)      <---------YAB1------->TEIL  -------->P      --------->HSFB2a(2)   ccaaggccatatctgaggaacacaccaacaggaggtatgaagattgcacaaagaacctcaaggaagctacccatttttttcttctgtaattttatgtttt  21316500                                                                     --------->ANAC55(2)                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC55(1)          ---                             <-----------GT1            <---------AHL20(2)                  <-------- ---------TBP      <------------------------ANAC81<----------DOF2    <---------ANAC55(2)  ------->TEIL   ttttatatgtttttttatgtttttttttgtttttctgtttcttagttttgaactttgttttatttcttcttacgtgttcatttccatttatgaactttgt  21316600                                         --------->ANAC58                                         --------->ANAC58                            --------->TOE2(3)                            --------->TOE1(3)                           <---------ANAC46                                                      <---      --------->ANAC58     --------->ANAC55(2)                                               --------      --------->ANAC58     <---------ANAC55(2)         >>>>>>>>>ARR2 ------>ZmHOX2a(1)       --------      ----------->GT1   <---------ARR14(2)             <------------CBF  <---------ANAC58    <------- <----------ID1       <---------MYB46(3) ----------->ARR10    <-----------GT1    ------>ZmHOX2a(1) ------->DOF2     --------->ATHB12 --------->MYB52(1) --------->ATHB12   <---------ANAC58    <------- --DOF2 --------->AHL20(2) ----------->GT1           <---------YAB1  <---------At4g35610   <------ZmHOX2a(1)   aaaagaacaagaaaatagaattagtggttacgttaaataagggaagaaactgagtttgattgtgtaacgtcctctgcttgttcctaaaatgaaggagctc  21316700                                              <---------MYB52(1)                                        --------->AtMYB61                                       <---------HSFB2a(1)                                       <---------HSFC1(2)         --------->ANAC58              --------->HSFC1(2)         --------->ANAC58         --------->ANAC58         --------->ANAC46         --------->ANAC46         <------MYB46(1) ------ALFIN1             <---------ANAC46   <-------GAMYB <------MYB83 ->GLK1(1)                <---------ANAC58------>MYB83 <---------MYB46(3) ->At4g35610              <---------ANAC58------>MYB46(1)<--------P --------->AHL20(2) --GLK1(1)            <----------DOF2  --------->HSFB2a(1) ----------->GT1 --At4g35610----------->RAV1(1)   --------->ANAC58     <---------DEAR3(2)   cacttcaacacaaacaacacaaccctttgcgttttgacgcaaccttccgttgttcatcggttggaaacaaaaaaatgggatgaacacaaataagaagtcg  21316800                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                        <---------ICU4          <---------AHL20(1)                                                     <---------ICU4            --------->AHL20(2)                                                     --------->YAB1        <---------AHL20(2)                                                    <---------ATHB12       --------->AHL20(2)                                                    <<<<<<<<<ARR2         <---------AHL20(2)                                                    <<<<<<<<<ARR1         --------->AHL20(2)                                            ----------->GT1               <---------AHL20(1)           --------->AHL20(2)           --------->AHL20(2)                --------->AHL20(1)           --------->AHL20(1)           <---------AHL20(2)             --------->YAB1               <           <---------AHL20(2)          --------->AHL20(2)      <-------GAMYB   <---------AHL20(2)   -        --------->YAB1         ---------->DOF2 <-----------GT1<---------MYB46(3)--------->AHL20(1) --   aataacttaaaaataaaatgttttgtttttgggcaaagaaattaaaatgttacaatcataatgtctgttacaaaaataaaattaaatttcatggattaca  21316900            <---------MYB52(1)       --------->ANAC46                                   <-----------GT1 --------->AHL20(2)                                  <---------ANAC58 ---------AHL20(1)                                   <---------ANAC58        --------->ICU4 -------->AHL20(1)                     ----------->GT1<----------DOF2   --------->YAB1      <-------- ------->AHL20(2)            --------->YAB1--------->AHL20(2)     <---------ZAT6       --------->ICU4   aatatatataggccattagtttgtattagtatcatcttatgtagataaaatgtttgcttttaactcaagtgtaaacataatttttagtgatttttatcaa  21317000  Previous    Next  AGI:  At1g57550.1    Description:  hydrophobic protein, putative / low temperature and salt responsive protein, putative. Identical to UPF0057 membrane protein At1g57550 [Arabidopsis Thaliana] (GB:Q9FE70;GB:Q1PFJ5); similar to hydrophobic protein, putative / low temperature and salt responsive protein, putative [Arabidopsis thaliana] (TAIR:AT2G38905.1); similar to Os03g0286900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049776.1); similar to Low temperature-induced protein lt101.2 (GB:Q9ARD5); contains InterPro domain Protein of unknown function UPF0057; (InterPro:IPR000612) Range:  from: 21316206    to: 21316474    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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