Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ATHB12                                <---------ATHB12                                --------->MYB46(3)                           --------->ANAC58                           --------->ANAC58                        <---------REM1(1)                      <------MYB46(1) --->ANAC58           <------MYB83 --->ANAC58           <---------MYB46(3)                     ---------->DOF2 --------->ANAC58 ----MYB52(2)        <---------AtMYB61                    ----------->RAV1(1)--------->ANAC58 -MYB52(1)        --------->ALFIN1             <---------ARR14(2)            <---------ALFIN1 --HVH21          <-----------RAV1(1)          --------->ARR14(2)   --------->YAB1 --TGA1     --------->ARR11(3)--------->WOX13(1)       --------->ANAC46 --------->ANAC46----------->GT1   aacaatttgaaatagataatgtgttggtgaagcaatcactggaagtgcctatccaaaacacaacaaagaagcataagacacacactaacacagttaaaat  21208000                                        <----------DOF2        <---------ICU4            <---------HSFB2a(2)     ---------->DOF2              --------->HSFB2a(2)  --------->At4g35610        --------->DAG2 <---------ARR11(3)         ---------->DOF2                                                      ----   caagagctaaagatgacccaatagataagataaagtctcgaactttgaatcaaatttgtagatgaaatgacaaaagattgcaaattgacaaaaaacaaaa  21208100                                                                               --------->WOX13(1)                                                         --------->HSFB2a(2)------->TEIL            -                          ---------->DOF2      <---------ARR11(3)           --------->ARR11(3)      <                 --------------->AtSPL8        --------->AHL20(2)--------->ANAC58                   <                 <---------------AtSPL8        --------->ARR11(3)--------->AtLEC2         --------->WRKY38(1)                 <---------------AtSPL3        --------->AHL20(1)--------->ANAC58         -----------               --------->YAB1  <---------GLK1(2)         <---------HSFB2a(2)<---------ARR11(3)    <--      <----------DOF2  --------->TOE1(3)       <---------AHL20(1)------>MYB46(1)     --------->ANAC46      --------->TOE2(3)--------->TOE2(3)       <---------AHL20(2)------>MYB83 ------>ZmHOX2a(2)   --- ------>DOF2  <---------YAB1   --------->ARR14(2)      ------>ZmHOX2a(2)    <---------AGP1--------->WRKY12   aaagacaactttagctataatagtaccttaaaggaatcgccttgagaaatatattgatcccagaaccaagcacatatggatctatcaacgcgatgaccag  21208200                                                                                     ------>ZmHOX2a(2)                                                                                     ================                                                                                    <------ZmHOX2a(2)                                                                                    --------->CCA1(2)                                                                                    =================                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3) -------->At4g35610                           ------->GAMYB                        --------->AGP1 ---------ZAT2                             --------->MYB52(1)                      <---------ARR14(2) ---------At4g35610                        ----------->RAV1(1)                     --------->ARR14(2) >HVH21                                 ------>MYB83                             ----------->ARR10 -------ZAT14                           ------>MYB46(1)                      --------->ATHB12   <---- ------>ZAT14--------->YAB1     --------->ANAC46                ----------->RAV1(1)<---------AGP1   taagctgcttctctagcattacctctctgtaaacacaaaaccaaacaacagaagatgaattgagtccaacatttcagactgattagatctgagtctgagg  21208300                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                              --------->GLK1(2)                                                                              ------->TEIL                             --------->GLK1(2)                            --------->LBD16                             --------->ARR14(2)                          ----------->GT1                            --------->ARR14(2)                           <---------ANAC58                            <---------ARR14(2)                           <---------ANAC55(1)                      -------->P                                         <---------ANAC58                   <---------MYB52(2)          <-------TEIL              <---------ANAC46    <-------                 <-----------GT1         ---------->DOF2                 <---------ANAC55(2) -------- ==HOX2a_HOX2a  <-------TEIL<---------GLK1(2) --------->CCA1(2)         <-------TEIL         <------- ==HOX2a_HOX2a--------->ARR14(2)   <---------At4g35610            --------->TOE2(3)          -------- --ZmHOX2a(1) <---------ARR14(2)   --------->At4g35610     <-----------ARR10 <---------CCA1(2) <-----   acagaaatggtttgaagattcactaacccagaatcggagatgagaaagatacattgaagcatctctaacctcgatgcgtgaatctgcaattgctcagctt  21208400                                     ------------>CBF                                 --------------->AtSPL8                                 --------------->AtSPL3            --------->ARR14(2)                                 <---------------AtSPL8     <---------HSFC1(2) --At4g35610                <---------ANAC58                --------->HSFC1(2)                  <---- ->At4g35610                <---------ANAC46                <---------HSFB2a(1)            <---------YAB1 --ZAT2                     <---------ANAC58             <---------At4g35610             --------->YAB1 ->ZAT2*TSS           <---------ARR14(2)             <-----------HVH21   ----------->HVH21 --------->ICU4 -----DOF2            --------->ARR14(2)      ----------->HVH21    <---------ARR14(2)   --------->ICU4   tcttctcttcttcgtcgattttgggatttggcttggaagtacaatactctgacccagtcagaggcttcgaatactctgacccagacagaaatgatgattt  21208500                                        --------->ARR11(3)                                        <---------ARR11(3)                                      ------->TEIL                   --------->MYB52(2)                                   <---------ATHB12                <---------MYB52(1)                           --------->ATERF1(1)                    --------->TOE2(3)                         <---------ANAC58                         --------->TOE1(3)         <--------                         <---------ANAC46                       <---------TOE1(3)           <--------      <----------DOF2    <---------ANAC58<---------YAB1         <---------TOE2(3)           <-------- -----AHL20(2)<----------DOF2------>NtERF2                     <-----------GT1         <----------DOF2   tatcttggctcttgggctttatttctggcgaggcccaatgaatatcatgggccttctatagtttttaacgttagttttagtttttgtaactttggcttgc  21208600                                                --------->ANAC58                                                --------->ANAC58                                       --------->ANAC55(2)                                       <---------ANAC58                                       <---------ANAC46                                      --------------->AtSPL3                                      --------------->AtSPL8                            <------ZmHOX2a(2)                                  <---------ARR14(2)                                   <---------ARR11(3)                          <---------ANAC55(1)   <---------TGA1a                        --------->ARR11(3)                          <---------ANAC58------->TEIL                            ------>ZmHOX2a(2)                          --------->ANAC55(2)   --------->TGA1a                 <---------ARR14(2)  <------ZmHOX2a(1)       <---------ANAC55(2) --------->MYB52(1)          <---------AtMYB61 -ANAC46                <-----------GT1<---------ANAC58                <---------MYB52(1) -ANAC58          ----------->GT1 --------->ARR14(2)        <---------AHL20(2)  <---------AGP1 -ANAC58    <---------YAB1<---------ANAC58--------->SPL7    --------->AHL20(2)  --------->ARR14(2)   tataggattgaattttcatcgtgttattacgtctccgatttgcgtacctcacgactgttttataaattataccggtatggtcgatctgagatcacttgta  21208700                                                               <---------AHL20(2)                                                            --------->ATHB51                                                            --------->YAB1                                                            <---------ICU4                                                            <--------ATHB1                                                            --------->AHL20(2)                                    --------->YAB1          <---------AHL20(1)                                   <---------ATHB12        <---------ATHB12                                 --------->WOX13(1) ----------->RAV1(1)                      <-------                           <------MYB83      --------->DAG2--------->ICU4 ---------->ID1 <----------DOF2                           <------MYB46(1)  --------->MYB52(1) --------->AHL20(2)       <------------                          --------->MYB59   ---------->DOF2<---------ATHB51       <-----------GT1<---   ctggtgatgaattgatataggtgtttgataggtcccaatcaaaacataaaggaacaacacaataattttttagtttgtagtttttgactctctttttatt  21208800                                                                                          <---------HSFB2a(2)                                                                                       <---------ARR11(3)                                                                                       --------->ARR11(3)                                                                                  --------->AHL20(2)                                                                                ----------->GT1             <---------WOX13(1)                 <-----------HVH21             ---------->DOF2         <---------WOX13(1)                    --------->bZIP60(2)          --------->ANAC58       --------->ATHB12                        --------->ANAC58         --------->ANAC58  --------->HSFB2a(2)    --------->GLK1(1)                          --------->ANAC58      ---------->ARF1  --------->RVE1(1)    <---------GLK1(1)                      <------ZmHOX2a(1)        <-----------HVH21 --------->CCA1(1) --AHL20(2)--------->ATHB12            <-------TEIL         --------->ANAC46--------->ANAC58 ------------ANAC81                   --------->GLK1(2)  <---------ETT(2)   --------->ANAC46 ------AHL20(2)    --------->YAB1     --------->CCA1(2)--------->LBD16  --------->ANAC58  <---------HSFC1(1)   ttttggatttcattgattgaataagaaaacagaaacaaagattcaggacaggtcatccgtagacacaacttgtcacacaagaaagtaaatatctagaaga  21208900  Previous    Next  AGI:  At1g56590.1    Description:  clathrin adaptor complexes medium subunit family protein. similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT1G60780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17400.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, mu subunit, C-terminal; (InterPro:IPR008968); contains InterPro domain Clathrin adaptor, mu subunit; (InterPro:IPR001392) Range:  from: 21205685    to: 21208407    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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