Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ----------->GT1                     --------->ARR11(3)                 ---------->DOF2          --------->HSFB2a(2)         <-----------GT1     <---------HSFC1(2)     <---------HSFB2a(1)                    --------->AHL20(1)                                   <---     --------->HSFC1(2)                     --------->ARR11(3)                           ------->TEIL     --------->HSFB2a(1)                    <---------ARR11(3)                       <---------TOE1(2) ------>ZmHOX2a(2)   <---------ARR11(3)    --------->AHL20(2)  --------------->AGL15------>ZmHOX2a(1)   ggatcgaattttctcgattcaaagatgtcaaaaaaacataaacaaatatatactaacatttttatcaaatattagaaaattcagtcctatgaactcatta  21149600                           --------->ANAC46                           --------->ANAC58                   <---------AHL20(2)                   --------->ATHB12                   --------->AHL20(2)                   --------->ATHB51                  <---------AHL20(2)                  --------->AHL20(2)               <---------AHL20(2)               --------->AHL20(2)              --------->AHL20(2)                            <----------DOF2          --------->ANAC55(2)         <---------AHL20(2)--------->ANAC58        --------->AHL20(2)                ----------->GT1   <----------DOF2<---------AHL20(1)            --------->YAB1         --------->WOX13(1)>>>>>>>>>MYB98 ------YAB1   <---------AHL20(2)             ----------->RAV1(1)   --------->GLK1(1) <---------ANAC55(2)   tgtttctttattttttttaaattatttgcaaacaacacattacaatgcaacaataaaacatactttcagatttcaatccaaaatgttaagtaacatatac  21149700                            --------->SPL7                            ------->TEIL                         --------->ANAC46                         --------->ANAC55(2)                         --------->ANAC55(1)                         --------->ANAC58                         <---------ANAC55(2)                         --------->ANAC58                        <---------------AtSPL3                        --------------->AtSPL8                                               --------                        --------------->AtSPL3                       --------->TOE2(3)       <-------                 <---------ANAC58                              <---------ICU4                --------                 <---------ANAC58                              --------->YAB1         <---------MYB52(1)                 <---------ANAC46                             <---------YAB1         --------->TOE2(3)           --------->ARR11(3)    <---------ALFIN1             --------->ICU4       <---------YAB1           --------->AHL20(1) --------->ZAT6                --------->YAB1         <---------TOE2(3)   --------->AtMYB61  <---------REM1(2)                    <---------YAB1    <-------TEIL    <-------   aaaaaccaaaacatatattgcttgtacacgtaccactaccttctcaagttttgcaatctctataataataacataaacatacattatcgttagacacttg  21149800                                                                                 <-----------GT1                                                                                <---------YAB1    --------->ALFIN1                   <----------ID1                         <---------ICU4 ->TGA1a       --------->ZAT14         --------->ANAC46                      --------->ICU4 --O2          <---------ZAT14       <-----------GT1                      ----------->TBP ->O2          --------->ZAT18    <---------ARR14(2)                      --------->AHL20(2) --TGA1a       <---------ZAT18    --------->ARR14(2)                      <---------AHL20(2) --------   agagatgtgagggagagtgcagttttgtaatgggccgatttacgacaaaataagcgaaatataaggccctgagtatataaatattactgtttagcggtaa  21149900                     <---------DOF5.7(2)                   --------->DOF5.7(2)                  <----------DOF2                  --------->TOE1(3)                    <---------DAG2                  --------->TOE2(3)                   *TSS   ---------->ID1                <---------TOE2(3)                   ------>NtERF2                <---------TOE1(3)                  --------->ANAC58               <---------DOF5.7(2)                 --------->ANAC46                     <---------ZAT14               --------->MYB52(1)                  --------->ANAC58           <------ZmHOX2a(1)           --------->ANAC58                       ------>MYB83            --------->LBD16           --------->ANAC58                       --------->SPL7         <-----------RAV1(2)   ------        --------->ZAT14                           ------>MYB46(1)        --------->HSFB2a(2)  -------       ----------->HVH21                        --------->TOE1(2)        <---------HSFB2a(2) <------- ->At5g28300 --------->DOF5.7(2)                --------->TOE2(2)<----------DOF2        --------->ZAT14   accctgtctgtgaacgctaacgttaaccaagtaggcttagattagtctaacctacgcccttttgtttctttggctccagaggaacaagagtgaagacggt  21150000                                      --------->ANAC58        <---------ZAT2                --------->ANAC58        <---------At4g35610     --------->TOE1(3)             ---------->DOF2    <---------ALFIN1            --------->TOE2(3)       <---------ZAT18 --------->ARR14(2) <---------At4g35610                 --------->ZAT18 <---------ARR14(2) --------->At4g35610                <---------ANAC46           <---------------AGL15 --->At5g28300    <---------WRKY12    --------->ANAC46 <---------ANAC58        ------->TEIL ---->GT1<---------GLK1(2) <---------ATHB12            <---------ANAC58<------ZmHOX2a(2)--------->MYB59 --DEAR3(1)     <-----------HVH21  --------->ARR14(2)<---------At5g28300  ------>ZmHOX2a(1)     <----   gaagttccacagcttcttcgtcaactccaataaaccataaacgctaattccaatttagcgtgctcaaagttcgatcctttgaatctaaatcaggtataga  21150100                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                                                             <-------                                                                                             --------                                         <----------DOF2                ----------->GT1      --------     <---------AHL20(2)   <---------ARR11(3) ---------->ID1        --------->GLK1(2)         <------- -----GLK1(2)   <----------DOF2   <----------DOF2       ------>ZmHOX2a(2)                    <-------   attttgtttaatcgacctctttattcgagctcttagcttttgtctttgttgtttttgatcgaattgaagaaactgggtaacaatttcaaaacccagatcc  21150200         <---------AHL20(2)         --------->AHL20(1)         <---------AHL20(1)         --------->AHL20(2)      --------->TOE2(3) -->ZmHOX2a(1) ---->TOE1(3)      ------>MYB46(1)                            ------>MYB83 ---->TOE2(3)      ------>MYB83                               <---------ARR14(2) >ZmHOX2a(2)      --------->WOX13(1)                          --------->ARR14(2) ->AGP1 --------->AHL20(2)                                  --------->AtMYB61 <---------ANAC58 --ARR11(3)      --------->AtMYB61                       <-----------GT1  <---------ANAC58 ->ARR14(2)   <-----------GT1                       --------->TOE2(3)     <---------ANAC58 ->ARR11(3)   >>>>>>>>>>WRKY38                    <---------YAB1     <---------REM1(2) --ARR14(2)   >>>>>>>>>>WRKY43    <---------YAB1 <---------GLK1(2)------>ZmHOX2a(1)       ------->TEIL --GLK1(2)    >>>>>>>>>>WRKY26<---------GLK1(1)<---------YAB1 ------>MYB46(1) <---------ANAC58     --   ttaaacttcattaaattgaccaatccaacttgatttctgattctaaaacatgattcttaaaaccaatcctctacatgcttgcttagtgtatgaacttgaa  21150300                       --------->At4g35610                      --------->ARR14(2)                      <---------ARR14(2)                      --------->GLK1(2)                   <---------ANAC55(2)         <----------DOF2                             --------->ALFIN1                   --------->ANAC55(2) <---------ARR11(3)                           <---------TOE2(3)                --------->WRKY18(1)    --------->ARR11(3)                           <---------TOE2(2)         --------->AHL20(2)          ----------->ARR10                              --------->MYB59         <---------AHL20(2)      <---------At4g35610                            ------->TEIL ------->YAB1 --------->WOX13(1) --------->At4g35610         <---------YAB1  <---------WOX13(1)  <---   ttgataacaaatttatcagtcaagtatctgaatttagctaagaccttctcttttttggatgttctgatttcattatctgatggacttaggtatgtggagc  21150400                              ---------->DOF2                                                       -                           <---------TOE2(3)                                                      <--                         --------->ATHB51                                                         <--                         --------->YAB1                                  ---------->DOF2          <--                         <---------ICU4                               ----------->RAV1(1)   <--------                        --------->ICU4                               <----------ID1         ---------        <---------ANAC46<---------ATHB51                            --------->ZAT18   --------->ANAC58 -------DOF2        <-----------------AG             ----------->GT1<---------ZAT18   --------->ANAC58   tttgatttttgagtgaaacaaaaacaattatggaaagtcttggaggtattggattcagtaatacgagtagtgcaacaaagaagaagagaagcactacatt  21150500  Previous    Next  AGI:  At1g56460.1    Description:  PAPA-1-like family protein / zinc finger (HIT type) family protein. similar to PAPA-1-like family protein / zinc finger (HIT type) family protein [Arabidopsis thaliana] (TAIR:AT2G47350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17423.1); contains InterPro domain Zinc finger, HIT-type (InterPro:IPR007529); contains InterPro domain PAPA-1-like conserved region (InterPro:IPR006880) Range:  from: 21149954    to: 21153281    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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