Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <----------DOF2                        <---------DAG2          <---------ARR11(3)                     ---------->ID1             --------->ARR11(3) ---ZmHOX2a(1)       <-----------GT1           <---------RVE1(1)           ---------->DOF2 ->CCA1(2)          <-----------GT1     <---------ZAT14           <-------TEIL     ------->TEIL   gagcacgagtcgtttcgatttttttcctttttcattctcgagtaaacagagattttagctagagaagattcatgtaagaaagatgaatcgagtagaaatg  21145100                   <---------ANAC46                   <---------ANAC58                   <---------ANAC58                              --------->ANAC58                  <---------DEAR3(1)                             --------->ANAC58                   <                 ------>NtERF2                               --------->LBD16                        -                 <------NtERF2                <---------YAB1 ------>NtERF2                          -                --------->DEAR3(1)    ------>MYB83          <---------DEAR3(1)                      <               <---------RAP2.6(2)    ------>MYB46(1)      <---------LBD16                    <------              <---------LBD16   --------->WRKY38(1)    --------->GLK1(2)                    ---------             ------>ZmHOX2a(2)  ----------->HVH21     <---------GLK1(2)                    --------->ICU4 ----------->RAV1(2)           <-----------HVH21      --------->ARR14(2)                 ---------->DOF2 <---------ANAC55(2)         <---------DEAR3(1)     ----------->ARR10             ---------->DOF2<---   gttacctgagtttgatcgcggccgtgtttgctcggtgacctagccattctgagagagattctccggcgagcaaatagtcgacgagaaagagcaaagatga  21145200                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                        <-----------HVH21                                                                                       <---------PCF2                                                                                      <------NtERF2                                                                                  <---------ANAC46                                                                                  <-------GAMYB                                                                                  ===================                                                                                 <---------MYB46(3)                                                                                 --------->MYB55(2) ---------HSFB2a(2)                                                             <---------ANAC46 -------->HSFC1(1)                                                              <---------ANAC58 -------->HSFB2a(2)                                        <---------GLK1(1)    <---------ANAC58   -- ---------HSFC1(1)                                         ========================================== ---YAB1                                      <------------CBF   <---------MYB52(1) --------->ALFIN1 >YAB1                                   --------->ZAT14   <----------DOF2    <-----------HVH21    <- ------YAB1    ---------->DOF2      *TSS <---------ZAT14   --------->GLK1(1) <-----------RAV1(1)  ---   ttctagaagaagactgagaaagtcacagagttcaattttgaactacagtattggacttgggctttccgatatttgagtaatgtcgggtggggtcatgtca  21145300                                           <-----------HVH21                                      <-----------HVH21                                     <------MYB46(1)                                     <------MYB83                                    --------->MYB59                                    <---------MYB46(3)                                    --------->MYB46(2)                                    --------->MYB111(2)                                    --------->MYB111(1)    ----------->GT1                 <---------AtMYB61   --------->LBD16                 <--------P <---------LBD16                  <---------MYB52(1) >TGA1a                        ------>ZmHOX2a(2)                                                   <- -bZIP60(1)                  <---------ARR14(2)                                                   <-- >bZIP60(1)            <---------ANAC58   ----------->GT1             ----------->HVH21         <---- =MYC_MYB              <---------ANAC58  <---------DEAR3(2)         <---------MYB52(1)        <------ ------->ARR14(2)     <---------MYB46(3) <---------MYB46(3)  --------->DEAR3(1)      ----------->HVH21 =bZIP_DOF  ----------->GT1  --------->ARR14(2)             --------->DEAR3(2)   <---------ANAC58 <-- --------ARR14(2)  <------------CBF<---------MYB55(1)     <-----------GT1        <---------ANAC46 --- -------->HVH21 --------->YAB1<------ZmHOX2a(2)        <---------KAN4(2)         <---------ANAC58----   gtaaccgggttaaatcgataatattggttgagatcgggtaggtcgggtcaaatcgagaataaaccggcccgtttgacacctctacgtgtgaaactgagtc  21145400        <---------ANAC55(2)        --------->At4g35610        ----------->GT1       --------->MYB59      <-----------RAV1(2)    <-----------HVH21  <---------DEAR3(2)  <---------MYB46(3)                                               <---------ANAC46 ----------HVH21                <---------AHL20(1)                 ----------->GT1 -------O2                      --------->AHL20(2)               ------>ZmHOX2a(2) -------RAV1(2)                 <---------AHL20(2)              <------ZmHOX2a(2)                   < -----HVH21                     --------->AHL20(1)    <------ZmHOX2a(2)        ----------->GT1    --- -------ZAT2                   --------->AHL20(2)   --------->At4g35610   <-----------GT1       <---- ------>O2 ---------->DOF2     <---------ATHB12--------->ALFIN1<---------ARR14(2)              ------ ----->MYB59      ----------->GT1        <---------YAB1        --------->ARR14(2)       ----------->GT1   aggtcgggtcaggtaaagaaccgtattaaaccaataaattgatattagtgtgtgagatcaaatcggatcgggtgaataaccaggttaaaccggtaaacac  21145500                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    --------->AGP1                                                                                    <---------ARR14(2)          <---------ARR14(2)                                                        <---------AGP1          --------->ARR14(2)                                                        --------->ARR11(3)          <---------GLK1(2)          --------->GLK1(1)                              <---------ARR11(3)  <-----------RAV1(2)                <---------GLK1(1)      <---------ANAC46        --------->ARR14(2) -----------HVH21              ---------->DOF2              ----------->GT1        <---------CCA1(2) ------>LBD16          <---------ANAC46                    <-----------------------TaNAC69(2) -----LBD16            <---------ANAC58           <----------DOF2       --------->AtMYB61      >>>>>> --->MYB52(1)          <---------ANAC58         *TSS       --------->MYB59     <-----------HVH21   --   cgggtcaggcccgattcgctatgtttcttgagcgaaaggaaatcacagaagtctttttagtgaggtaaacaaaaccaaaaccatcagatcttaagaagaa  21145600                             --------->ARR14(2)                 <---------RVE1(1)                 <---------CCA1(1)        <---------ZAT18      --------->GLK1(2)                                                      <      <---------At4g35610    <---------ARR14(2)     --------->WOX13(1)                          -----   ---------->DOF2       --------->HSFB2a(2)      <------ZmHOX2a(2)                           ------>ZmHOX2a(2) --------->TOE2(3)       <---------HSFB2a(2)     --------->AGP1            <-----------GT1    ======= >>>TBF1--------->ZAT18  --------->HSFC1(1)     --------->At4g35610       <---------YAB1<---------At4g35610 ----->TEIL     --------->ARR11(3)              <---------At4g35610    <---------YAB1<---------At4g35610   gaacctaaagctcactacgatatttttcgagaatatgacgactgtaagtcagatcaatctcgtcttcaatgttcttattactatctctgcttctgatcct  21145700                                                                                        ------>ZmHOX2a(2)                                                                            --------->GLK1(2)                                                                           <---------GLK1(2)                                                                          --------->HSFB2a(1)           <---------ANAC58                                              ----------->ARR10           <---------ANAC58                                            ------->GAMYB   <------ZmHOX2a(2)      <------------------------ANAC81                               --------->MYB52(1)<---------ARR11(3) ---------TOE1(2)        <---------YAB1       <---------At4g35610--------->YAB1       --------->ARR11(3) ->ZmHOX2a(1)      ------>ZmHOX2a(1)     <---------At4g35610   <---------WOX13(1) --------->YAB1>>>>> =========================HOX2a_HOX2a <<<<<<<<<TBF1         <---------YAB1--------->GLK1(1) ---------   tctaggtttgatttcgttttcctgattttgattttgtttcttcttctgagcagttttctgttccgattgataacggagattctatgaagatcgcagaaga  21145800                      --------->RVE1(1)                     --------->GLK1(2)                     --------->ARR11(3)                                                <---------AHL20(2)               --------->At5g28300                                                    <---------AHL20(2)          <---------ZAT14                                                             <---------AHL20(1)     ---------->DOF2 <---------ARR11(3)                                 --------->ARR14(2)  <--------  --------->YAB1    --------->RVE1(1)                                   <---------ARR14(2)  <-------- >>>>TBF1 --------->ZAT14                            <---------------AGL15            --------->AHL20(2) >At4g35610   ----------->GT1      <---------YAB1    --------------->AGL15            --------->AHL20(1)   agaatcacaaagaacactgtaaaaatctcttactcttatgcttatgtagggttttcgattttgagaaaatttgggattcgattttgaatttattagggtt  21145900                                    --------->ARR14(2)                <---------------AtSPL8                                                        <------MYB46(1)                <---------TOE2(3)--------->HSFB2a(2)   <---------------AtSPL8          --------->CCA1(2)                --------------->AtSPL3             --------->WOX13(1)             <---------At4g35610   <---------AtMYB61         <<<<<<<<<MYB98  <---------MYB46(3)                 <---------ANAC58 -TOE2(3)       --------------->AtSPL8       <-----------RAV1(1)                <---------ANAC58 -TOE1(3)       --------->MYB59  <---------HSFB2a(2) <---------ATHB12     <---------YAB1      <------MYB83   ttgttttggttttttgtttaggtacccatatgttactggaacttcaattgttgcaatcaagtacaaagatggggttttgatggcttctgatatgggaggt  21146000  Previous    Next  AGI:  At1g56440.1    Description:  serine/threonine protein phosphatase-related. similar to ATTOC64-III (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III), binding / carbon-nitrogen ligase, with glutamine as amido-N-donor [Arabidopsis thaliana] (TAIR:AT3G17970.1); similar to unknown [Picea sitchensis] (GB:ABK26202.1); similar to Os05g0129900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054548.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 21142195    to: 21145236    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56450.1    Description:  PBG1 (20S proteasome beta subunit G1); peptidase. Identical to Proteasome subunit beta type-4 precursor (PBG1) [Arabidopsis Thaliana] (GB:Q7DLR9;GB:O23718;GB:Q9C7X3); similar to PBA1 (20S proteasome beta subunit A 1), peptidase [Arabidopsis thaliana] (TAIR:AT4G31300.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21811.1); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 21145548    to: 21148065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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