Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>GAMYB ------DOF5.7(2) -----WRKY38(1) -----WRKY12 -----WRKY45                               <---------ATHB12 --->DOF5.7(2)                      <----------DOF2   <---------AHL20(1) -----HVH21      <---------ATHB12  <---------ANAC58   --------->ARR11(3)          --------->At4g35610 -->TOE2(3)     <-----------ARR10  <---------ANAC58   --------->AHL20(1)    --------->ICU4 -->AG    <-----------GT1       <-----------GT1      --------->YAB1      <---------YAB1   --------->YAB1   aacgacgttttttttccaaatcatccctacaaatttagctttccaataaactcaaaaatattgtttctaagagtcatcaatattagatgaaataataagg  21140200                               <---------AHL20(2)                              --------->AHL20(1)                     <---------------AtSPL8                              <---------AHL20(1)               <---------------AGL15                 <---------------AGL15                         --------------->AGL15                 --------------->AGL15                        --------->TOE2(3)                ===============================================================MADS_MADS                <-----------------AGL1                      <---------At5g28300                <---------ANAC46                           <-----------GT1                <---------ANAC58                      <---------AHL20(1)                        <----                <---------ANAC58   <-----------GT1    <---------ARR11(3)                   <---------AHL20(2)                <-----------------AGL3                --------->ARR11(3)                  --------->AHL20(2)       <---------YAB1   ----------->GT1       <-----------GT1 --------->TOE1(3)      ----------->GT1- <---------YAB1 <-----------------AGL2--------->TOE2(2)<---------AHL20(2)      <------ZmHOX2a(2)-----   gtcatcaatgttattgtttcttgaaatggttatatatttacctatgtattactgtatatatttaccttgaaatggtactcgatcacttggtataaaattt  21140300                                                        --------->YAB1                                                        <---------ICU4                                                        <--------ATHB1                                                        <---------AHL20(2)                                                        <---------AHL20(1)                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  --------->ANAC55(1)                                                  --------->ANAC46             <---------TOE2(3)                    --------->ANAC58      <---------AHL20(1)                          --------->ANAC58      <---------AHL20(2)                         <---------TOE2(3)      --------->AHL20(2)                    --------->AHL20(2)     --------->AHL20(2)                     <---------AHL20(2) --------->AHL20(2)                         <--------ATHB1 --------->ARR11(3)                         --------->ATHB51 <---------AHL20(1)                         <---------ICU4 <---------AHL20(2)                        --------->ICU4          <---------ICU4 <---------ARR11(3)                      --------->YAB1 --------->AHL20(2) --------->AHL20(1)                --------->ANAC58    --------->ICU4                              <- -----AHL20(2)                 <------ZmHOX2a(1)<-----------GT1   --------->ICU4           --------->AtLEC2 -------->AHL20(2)       <---------AHL20(2)<---------YAB1 --------->ICU4    <---------ALFIN1       -- ---->AHL20(2)  --------->GLK1(1)  --------->ANAC58    <---------ATHB51   ----------->RAV1(1)     ---   aaatatattaaatttgagatttcaaaatttataggataagaaataataatttacgtaataattttgaaataatgtccaacacatttttcattcatgcata  21140400              <--------ATHB1              <---------ICU4              --------->YAB1              -------->HAHB4              --------->ATHB51              <--------HAHB4             --------->ICU4             <---------YAB1             <---------ATHB51                                                                     ---             --------->AHL20(2)                                                --------->AHL20(2) <--           --------->YAB1         --------->AHL20(2)                           <---------AHL20(2)<---        --------->TOE2(3)        --------->AHL20(2)                     --------->ANAC58       ------ --------AHL20(2)              --------->TOE2(3)     ---------->DOF2    --------->ANAC58 --------->ZAT6 ------->AHL20(2)--------->AHL20(2)             --------->YAB1     <---------YAB1      <-----------GT1 ------>AHL20(2) <---------AHL20(2)        ------->TEIL   --------->CCA1(2)   --------->AHL20(2) ----   ttaaattcaacattaataattaaaccaaaaaaacattaaaaaatgaacatttataaaaagacatgagttacgataagaaatttaaaaattaacacttcat  21140500          <---------ANAC46        <---------ZAT2        --------->ZAT2        <---------At4g35610 --------->AHL20(1)                                                  ------------>CBF <---------AHL20(2)                                             --------->GLK1(2) --------->AHL20(2)                                             <---------ARR14(2) <---------AHL20(1)                                             --------->ARR14(2) ------>AHL20(2)                                           ----------->RAV1(1) -------AHL20(2)              ---------->DOF2             --------->ZAT18 --------->AHL20(2) ------AHL20(2)             --------->YAB1                <---------ZAT18--------->AHL20(2) --->TOE2(3)        ---------->DOF2                     --------->PCF2   <---------ATHB12 ----->AHL20(2)   <---------AHL20(2)    <---------AHL20(2)--------->RAP2.3(3)  <-----------GT1   taatttattgtgctgggtattaaaaagaaatcaaaagtatatttattctatgttatggagcccacaaatctgccaataaataaaccatctcaccaaaaac  21140600                                         <---------ZAT14                                         <---------ZAT18                         <---------DDF1                                         --------->ZAT14                        <---------bZIP60(1)         *TSS  --------->YAB1            --------->ZAT18                        --------->ETT(2)      --------->At4g35610            --------->DAG2                             <---------ETT(2)      <---------At4g35610           ---------->DOF2     <----------DOF2         <<<<<<<<<<bZIP23      ----------->RAV1(2)     ----------->GT1<---------DAG2           --------->TOE2(3)    <-----------GT1         ---------->DOF2  <----------DOF2  ----------->GT1   <<<<<<<<<<bZIP19   ttcatttcacctgaaaaacataactcttaagaaagaaaaaaagttcacttttcattttcttttctcgtaaaacctcatagtgtcgacatgggttattgcc  21140700                                            --------->HSFB2a(2)                              <----------DOF2                             <---------ICU4 <---------HSFB2a(2)                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           --------->ARR11(3)                     <------ZmHOX2a(2)     ------>ZmHOX2a(2)                     --------->CCA1(2)    <------ZmHOX2a(2)                    <---------ARR11(3)   <---------ARR14(3)                    --------->AGP1       <---------AGP1                                    ----------                    <---------AGP1--------->ANAC46<---------ANAC58                <---------ALFIN1                    <---------ARR14(2)   --------->ARR11(3)                    <---------ETT(2)  ----                    --------->ARR14(2)   --------->ARR14(3)                    --------->bZIP60(1)                    --------->ARR11(3)   --------->ARR14(2)                    >>>>>>>>>>bZIP19  <---       -------->P   <---------ARR14(3)   <---------ARR11(3)                    --------->ETT(2)  ----       ------>MYB46(1)     <---------ARR11(3)     <---------ANAC58             >>>>>>>>>>bZIP23  <---       ------>MYB83 --------->ARR14(3)   <---------ARR14(2)                --------->ARR11(3)--------     --------->AtMYB61------>ZmHOX2a(2) --------->RVE1(1)                  <---------ARR11(3)-------- <----------ID1   ----------->ARR10  ---------->DOF2         ---------->DOF2  --------->DDF1 --------   aagacgaccaactcgtaaacaagatctgcgatctttacgaaaagatctcgaagcttgagaccctaaagccttgtgaagatgtcgacactctcttcaagca  21140800                                    --------->O2                                    --------->TGA1a                                    <---------O2                                    <---------bZIP60(1)                                    --------->ANAC46                                    --------->bZIP60(2)                    <---------MYB111(2)                    <---------MYB111(1)                    --------->AtMYB61<-----------TGA1                    <---------MYB46(2) >DOF2   <-------MYC2               --------->bZIP60(1) ----->ZAT2         <---------MYB55(2)                                                  <---------ARR11(3) ------ZAT2<-------TEIL  --------->TOE1(3)                                              --------->GLK1(2) ----->At4g35610    --------->MYB46(3)--------->TGA2(2)                                 --------->ARR14(2) ------At4g35610   --------->ANAC46 <---------TGA1a                                     <---------ARR14(2) ->ANAC58------->MYC2    --------->TOE2(3)    <---------ARR11(3)               --------->TOE2(3) ->ANAC46------->MYC3 ------>MYB46(1)<-----------HVH21                   <------ZmHOX2a(2) ->ANAC58<-------MYC3 ------>MYB83 <-----------STF1               --------->CCA1(2) --------->YAB1   gctcgtgtccacatgcataccaccaaaccctaacatcgacgtcaccaagatgtctgaaaacatccaagagatgagatcaaacctcatcaaaatctgtggt  21140900                                                                                                   --                                                                                                 ----                                                                                                -----                                                                                               <-----                                                                  --------->ATHB12             <-----                                                                  <---------ICU4               <-----                                                                 <---------YAB1                <-----                                            <----------DOF2    --------->REM1(1)               ------                                   --------->TOE1(3)           --------->YAB1      ------>ZmHOX2a(1)           <---------ANAC46        --------->TOE2(3)<---------ARR11(3)            --------->TOE2(3)--      ----------->GT1<---------ALFIN1 <-----------GT1    ------->GAMYB   ------->TEIL       ---------     <---------TOE1(3)             --------->YAB1   --------->ARR11(3)  <---------CCA1(2)--------->REM1(1)   gaggctgaaggttacttagagcatcacttctcttcaatcttaacctcttttgaagataacccccttcatcatttgaatctttttccttactacaacaact  21141000        --------->ANAC58 ------->TOE2(3)                         <---------MYB59 ---->P --------->ANAC58                 --------->TOE1(3) -->GAMYB   --------->ANAC58             --------->TOE2(3) ----MYB111(2)            ------>ZmHOX2a(2) ----MYB46(2)            <---------GLK1(1)                               --------->ATHB12 ----MYB52(2)--------->ZAT2   <---------HSFB2a(2)                       <---------YAB1 ----MYB111(1)          --------->ARR11(3)                            <----------DOF2 --->MYB46(3)<---------ZAT2   ------>ZmHOX2a(1)                      <---------ANAC58   --------->At4g35610 ------->TOE1(3)        <---------ARR11(3)  --------->MYB52(1)       <---------ANAC58   ------>ZmHOX2a(1) >MYB46(3)  --------->ANAC58  --------->HSFB2a(2)            <------ZmHOX2a(1)          <---------At4g35610   acctcaaactaagcaagctcgagtttgatctcctcgaacagaacctaaacggttttgttccaaggactgtagctttcattggctctggtcctctccctct  21141100  Previous    Next  AGI:  At1g56430.1    Description:  nicotianamine synthase, putative. Identical to Probable nicotianamine synthase 4 (NAS4) [Arabidopsis Thaliana] (GB:Q9C7X5); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT1G09240.1); similar to putative nicotianamine synthase [Arabidopsis halleri subsp. halleri] (GB:CAE45015.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) Range:  from: 21140609    to: 21141752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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