Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ZAT14                                     <-------TEIL                                   <---------SPL7                                  <---------ANAC58                                  <---------ANAC46                         ----------->GT1                                  <---------ANAC58                      <---------AtLEC2                                 --------------->AtSPL8    <---------ARR11(3)                                 --------------->AtSPL3    --------->ARR11(3)                               ------------------>SPL14    --------->GLK1(2)         ------->TEIL      <---------YAB1      <---------ZAT14--------->WOX13(1)    ---------->DOF2   ctaagagtatgaaccagaattatgcaaatacaattgccgtacatgttagtaaactactgaaaatctatcagtttgcaagataaaaacaaaggcttctact  21127500                                                                       ---------->DOF2                                                                     >>>>>>>>>RAP2.2                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                                  <---------GLK1(1)                   --------->AHL20(2)                             <---------CCA1(1)                --------->TOE1(3)                                 --------->GLK1(1)                --------->YAB1                                    <---------RVE1(1)                --------->TOE2(3)                                <---------ARR11(3)          <---------ANAC55(2)                              --------->ZAT2   ----------->GT1          --------->ANAC55(2)                              <---------At4g35610               <-------       --------->ARR14(2)                   --------->GLK1(2)    --------->ARR11(3)          --------       <---------ARR14(2)                --------->LBD16   --------->At4g35610       <-----------GT1<   acatatgcaaatacttaaccataatatacagaaaccagtaatccagaatcaatgtaataagagctgagatatctaaaggagaaaattttactcgagttct  21127600                                                                        ------>NtERF2<---------MYB52(1)                                               --------->ALFIN1         --------->LBD16                                             --------->ZAT2            --------->ANAC58                                           <-----------RAV1(2)         --------->ANAC58      <------- --ARR11(3)                              ----------->RAV1(1)           --------->ANAC46  <---------ZAT18 ->ARR11(3)---------->DOF2             --------->At4g35610   <-----------GT1  --------->AHL20(2)  --- ---------ANAC46      <----------DOF2  <---------At4g35610 <----------DOF2    <---------AHL20(2)<----   tggcgaagagcatcaaagagttctcttttagtctgtttctcagcaccaggtgtgttcagaactttactctcttccgccattttaatcgttgtgctcttta  21127700                         --------->GLK1(2)                      --------->ANAC58                  --------->YAB1                                                 <---------ARR11(3)     ------>ZmHOX2a(1)--------->ANAC58                                    --------->GLK1(2)        <- ---DOF2       --------->YAB1                --------->DAG2               <---------ARR11(3)       <- ------>ZAT6   <---------ICU4               ---------->DOF2           --------->YAB1          <------ -------GT1   --------->ICU4     --------->YAB1                 --------->YAB1   --------->ARR11(3)--   actcttcctgttcacaataatcacaagaatttgaatcacaaaaacaaaaagtcacaaactttgaaatcaaaatcaaaatctaagaacttacattggcttt  21127800              ------>ZmHOX2a(1)             --------->TOE1(3)            ------>ZmHOX2a(2)            ----------------->AGL1           <---------YAB1          --------->ARR11(3)      --------->YAB1    <---------WOX13(1)  --------->ATHB12                                                                        --------->ANAC58 --------ZAT2--------->TOE2(3)                                                            --------->ANAC46 --------At4g35610                                 <---------ARR11(3)                     --------->ANAC58 ----DOF2 <---------ARR11(3)                       --------->ARR11(3)     <---------AHL20(2) ------->At4g35610                           --------->YAB1               --------->AHL20(2)   gagctgattgatgatccttaatcggagagcatcgatagtaccatcgttcataagatgttcaagaacgtcttctggtttaattactgaagaagacgacatt  21127900                 ------->GAMYB                --------->MYB46(3)               -------->P               ------>MYB83               ------>MYB46(1)                                                             <---------ZAT2               --------->ANAC58                                                            --------->ZAT2               --------->ANAC58                                                            --------->At4g35610             --------->MYB46(3)                                                        --------->YAB1             <---------ALFIN1                                <---------TOE2(3)     <---------AHL20(2)            --------->MYB46(3)                           <----------DOF2      <-------TEIL <---------At4g35610           --------->ANAC46                         --------->YAB1          --------->ARR14(2)       <---------ARR14(2) --------->TOE2(3)        <---------YAB1           <---------ARR14(2)      <       --------->ARR14(2) --------->TOE1(3)      --------->YAB1<---------SPL7--------->CCA1(2) ------   gttcttcaaaatcccccaaccaaaaaaaccctaaacgtttttgaaaaccgattatgatgctttgaggtaccagagacagatacaaataatcgtagctgtg  21128000                                                                                         <------NtERF2                                                                                         ----------->GT1   <-------TEIL                       <------------CBF                                  --------->HSFB2a(2)  --------->CCA1(2)             <---------ARR14(2)                                      <---------HSFB2a(2)  --------->ARR14(1)            --------->GLK1(2)                                      <---------LBD16 <---------GLK1(2)              --------->ARR14(2)                                  <---------ANAC58 --------->ARR14(2)      <---------At4g35610                     <------------CBF   <---------ANAC58 <---------ARR14(2)      --------->ZAT2                     --------->YAB1       <----------DOF2 --------->ARR11(1)      --------->At4g35610             --------->WOX13(1)     <---------ANAC58 ---------HSFB2a(1)     --------->GLK1(2)              ------------>CBF         <---------ANAC58 ----->HVH21           <---------GLK1(2)   <------------CBF<---------ATHB12   --------->GLK1(2)   aaagattcgattttggaaaaacccagaagctgagaatccaaattggattgagagagtagcaatcagagattgaaaacgagtttctttcgtcgggaaatat  21128100                             ---------->DOF2                        --------------->AGL15                        <---------------AGL15                                                     ---                   <---------ICU4                                   --------->ARR11(3)           ----                  <---------ATHB12    --------->MYB52(1)            <---------ARR11(3)        <------              ------------>CBF       --------->TOE2(2)             <---------GLK1(2)     <---------GLK1(2)        <---------AtMYB61<----------DOF2                   --------->AHL20(2)     <---------ANAC55(2)      <----------DOF2   =============================================================================   ttgtctagctttggttctcaatctttcctttgaaagaaacatacggtttttctaaaccgaattaaaccaaaatctcatgttattacatatagaatttttc  21128200                                         --------->AHL20(2)                                         <---------AHL20(2)                                       --------->AHL20(2)                                    <---------AHL20(1)                                    <---------AHL20(2)                                    --------->AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(2)                                <---------ICU4                                --------->ATHB51                                <--------HAHB4                                 <---------YAB1                               <---------YAB1                                  --------->AtLEC2      <---------AHL20(2)       --------->ICU4                               <------ZmHOX2a(2)      --------->AHL20(2)     <---------ICU4                                --------->ARR11(3)  --------------->AGL15      <--------HAHB4                                <---------ARR11(3)  <---------------AGL15      --------->YAB1        --------->AHL20(2)     <------ZmHOX2a(1) --->ZmHOX2a(1)             <---------ATHB12   <---------AHL20(2)   <---------HSFB2a(2) ----->TOE2(3)            --------->WOX13(1)   --------->AHL20(2)   --------->HSFB2a(2)   <---------ANAC58 -----GT1          <-----------GT1<---------YAB1   <---------AHL20(2) ---------->DOF2     <---------ANAC58 =================MADS_MADS --------->ICU4   <---------AHL20(2) --------->GLK1(1)         <---------ANAC46   cttactatttaaaaaaacaattcacaatccatcattattaaatttatatttttttaaatatgtgtgatttctaaaaggatcatgctaatgtgtcttggta  21128300                                                                               <---------AHL20(1)                                                                               <---------AHL20(2)                                                                              --------->YAB1                                                                             <---------YAB1                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                  <---------ICU4                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <---------AHL20(1)                              <------MYB83                      --------->AHL20(2)                              <------MYB46(1)                  <---------AHL20(2)                                 xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  --------->AHL20(2)                                 --------->MYB59                 --------->AHL20(1)                               <---------GLK1(2)                 --------->AHL20(2)                               --------->ARR14(2)                 <---------AHL20(2)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                 <---------AHL20(1)  <-----------GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --      --------->TOE2(3)   <-----------GT1      --------->ARR11(3) <---------ARR14(2)               --    --------->GLK1(2) <---------AHL20(2)    --------->DAG2    <-----------------AGL2             <---   <---------GLK1(2)  --------->AHL20(1)   ---------->DOF2xxxxxxxxxxxxxxxx>smallRNA(i) <-----------GT1   atagagattcttaaacaaatttaattaattacccaatatttactaaaaagttattgaaactacaaccagatttggtcttataatatttgtaacccaatac  21128400  Previous    Next  AGI:  At1g56420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17438.1) Range:  from: 21126216    to: 21127899    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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