Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------AHL20(2)                                                        ---------->ID1 ------->YAB1                       <---------SPL7                         <----------DOF2 -------YAB1                  --------->ANAC58                        ----------->HVH21      <------- ------ARR11(3)               --------->ANAC58 <---------WOX13(1) --------->ZAT18            -------- ----->ARR11(3)          --------->ZAT18    ----------->HVH21     <---------ZAT14 <---------YAB1   <- ---->YAB1       --------------->AGL15--------->SPL7              --------->ZAT14 --------->ICU4  ---   atcatattttttagtcagtccattaagagcacaagctccatacggtctgatggaccaaaaacagtgtctgcactgacctttgtcactattatctctgcta  21110100                                                                         <----------DOF2                                                                     <---------GLK1(2)                                                                   --------->LBD16                                                                 --------->LBD16                                                              ------>ZmHOX2a(1)                                                             <---------ALFIN1                                                          ------>ZmHOX2a(2)                                                         --------->GLK1(1)                                                         <---------GLK1(1)            ----------->GT1                  <---------ANAC46                       <------ZmHOX2a(2)            <---------ANAC46           ---------->DOF2                              --------->ARR14(3)            <---------ANAC58 --------->AHL20(2)  <---------ANAC46                   --------->ARR11(3)            <---------ANAC58 --At4g35610  <---------ZAT2<-----------GT1             <---------ARR14(2)   <---------ANAC46 ->At4g35610  --------->At4g35610                       --------->ARR14(2)   <---------ANAC58 ---------DOF2<---------At4g35610                       <---------ARR11(3)   <---------ANAC58 ------>TOE2(3)  <-------TEIL  <---------MYB59         <---------GLK1(1) <---------DAG2            <-   cctttatatatagtaaagctgcgtcgtttattaccaaaatgaaacatacaactatagagatctcctccccagaaacttttcgtgaattgagtgaattttg  21110200                                                                              <-----------HVH21                                                                              ------->PIF5         --------->At5g28300                                                  <-------PIF5        ----------->GT1                                                      --------->ANAC58        --------->LBD16                                                      --------->TGA1a       --------->LBD16                =================================================bZIP_DOF      <------NtERF2                   <----------DOF2                        --------->ANAC58      <---------LBD16                 <---------DAG2                         --------->ANAC46  --------->ANAC58            <---------ANAC58                               <---------TGA1a  --------->ANAC58            <---------ANAC58                               --------->bZIP60(2)  --------->ANAC46    <-----------HVH21                 <---------MYB52(2)   --------->O2       ----- --------->SPL7<---------GLK1(2)  ---------->ID1--------->YAB1     --------->ZAT6              <----- --------SPL7--------->ICU4  --------->ZAT2    <---------YAB1  <---------MYB52(1)   --------->GLK1(1)   tcatacgccccggtaaaaattctcggtcacgagcttgcccctttatgttattatagcaactagcagttagcactaaaccacgtccgatatcgtttctgag  21110300                                  <---------AHL20(2)                                  --------->ARR11(3)                   --------->ARR11(3)                   --------->ARR14(2)                   <---------ARR14(2)                   <---------ARR11(3)                   <---------ARR11(1)                  <---------CCA1(2)              <------NtERF2       <---------ARR11(3)            --------->ETT(1)      --------->AHL20(2)                   --------->ARR11(3)         <-----------RAV1(1)      --------->AHL20(1)                 <---------TOE2(3)        ------- ------>GT1--------->RAP2.6(3)--------->LBD16 <----------DOF2   <---------MYB52(1)  --------->YAB1 ----TOE2(3)<---------RAP2.6(2)   <---------AHL20(1)       <-----------GT1       <----------DOF2   gtaaacatgtattgtcggccatatctcccatccgaatatattggtattctttattctaaatacaccgttttgagataatgctactttcatgagcaacgat  21110400                                                                                              <------                                                                                            ---------                                                                                          <----------                                                                     --------->TOE2(3) <---------AHL20(2)                                                                     --------->TOE1(3) --------->AHL20(2)                                                               --------->ICU4     --------->ARR11(3)                                                     <---------TOE2(3)            <---------ARR11(3)      --------->ANAC58                            <---------AHL20(2)<---------ANAC46 <-----------TBP      --------->ANAC58                      <----------DOF2   *TSS  ----------->GT1<---------AHL20(2) -->YAB1     <---------YAB1         <----------DOF2  <---------TOE1(3)            <---------AHL20(1)   agtatgagaagcattatcagttttctatgggaaaccatcttttattctttattttatggtttgcaatgtttcgttaaatgagtatatatttatattgtga  21110500                                       --------->DOF5.7(2)                                       <---------MYB52(1)                                      <----------DOF2                                      <-------GAMYB                                     --------->MYB52(2)                                     <---------ANAC58                                     <---------ANAC58             <---------MYB46(3)                                    --------->SPL7             <------MYB83                                   <---------MYB52(1)          <------MYB46(1)   <---------AHL20(2)            <---------ANAC58          --------->STY1(2)  <---------AHL20(2)             <---------ANAC58          <---------STY1(2)     <-----------GT1  <---------AHL20(1)          <-----------HVH21      --------->WRKY38(1)  <---------ARR11(3)  --------->AHL20(2)         ------->GAMYB --------->TOE1(3)<---------ANAC58     --------->YAB1 ---YAB1                    <------------AtMYB77   <------------CBF     <---------YAB1 -->GT1                   <-----------GT1  <---------DAG2  --------->ZAT2 --------->ARR11(3) --CBF                 <---------REM1(1)   --------->TOE2(3)<---------ANAC58------>ZmHOX2a(2)   ataattttttttagacgatgttaagttgtaactgtccgtgcgttaccttatagcattgactagcttggtggtttatgatctaataacagttttgtattct  21110600                                              <-------GAMYB                                         <-----------RAV1(1)                                    ------>ZmHOX2a(2)                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  <-----------ARR10                                  --------->ARR11(3)                                  <---------ARR11(3)                                  --------->AGP1           <---------ICU4         <---------AGP1     --------->ETT(2)              <---------WRKY38(1)           --------->ATHB12      --------->RVE1(1)   <---------ETT(2)              <---------WRKY12          <---------YAB1      ---------->DOF2<------MYB46(1)                     <-----------HVH21        --------->ANAC46  --------->TOE2(3)  <---------MYB46(3)              --------->DAG2         -      --------->ANAC46   --------->REM1(1)   <------MYB83  --------->ATHB12 ---------->DOF2   <------   cttgaaacacacatcattgtaaatgctacattaaaagatctaattgttggttatgtcgacttgatttgatattttagaaaaagtgtcaacgcttataaac  21110700                  <-------TEIL                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ----------->GT1           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------HSFB2a(1)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ARR11(3)        --------->ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <---------ARR11(3)   --------->ANAC58 --------->ARR11(3)        ----------->GT1       <---------CCA1(2)     --------->ANAC58--------->GLK1(1)         --------->ANAC46 -------->YAB1   <-----------GT1        ---------->DOF2                --------->ANAC58 -----GT1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------GLK1(1)         --------->ANAC58            --   aatattagtatatctatatatacatttttgcaggcattttagtaaagaaatcttcgagttaaaacttatttacaaggaaatatagatttacaagaacaaa  21110800                                                                                            <--------                                                                                        --------->YAB1                                  <---------ICU4                                     --------->bZIP60(1)                                 --------->ICU4                                      <---------bZIP60(1)                     --------->TOE2(3)                             --------->LBD16 --------->YAB1                    ----------->GT1 <-----------GT1                ------>NtERF2  <---------YAB1  <--      <---------ARR11(3)    ----------->GT1                       --------->ANAC46--------->ICU4-----      --------->ARR11(3) <---------ARR14(2)       --------->AHL20(2)        --------->ZAT6  ---------      <-----------ARR10 <---------CCA1(2)         <---------AHL20(2)      --------->MYB52(1)<-------- --------->GT1      <---------ANAC55(2)   --------->YAB1         <---------LBD16--------->YAB1 <-----   atggttaaaatcttcgctaaaaacgtaaatctgtaatttttccatcagaaatataaattcgacattttccgccaaataacagtaatgatatcatattatt  21110900                               <---------WRKY12                              --------->WRKY18(1)     <---------YAB1          <---------PCF2   -------->ATHB1           <------MYB83   <--------HAHB4          <---------MYB46(3)   <---------ICU4         --------->ALFIN1   --------->ATHB51    --------->ATHB12   --------->ATHB12   <---------YAB1  --------->ICU4   <---------AHL20(2) -AHL20(2)        --------->AHL20(2)                           ---------->DOF2 -------YAB1     <---------YAB1<---------WRKY38(1)          --------->AHL20(2) ---->YAB1     <---------AHL20(2)                           --------->YAB1 >AHL20(2)    <---------AHL20(2)                       <---------ATHB12 -YAB1        --------->AHL20(2)         <-----------GT1 --------->WOX13(1)  <---------WOX13(1)   <-- ----YAB1 <---------AHL20(2)<------MYB46(1)      <-----------GT1      <-------TEIL              -----   atgaattattagtttatttattatatgagtgggtcaacctatttaaccatttaacccatcaattaaaaagagttcatagattgactcaattcatgaattg  21111000  Previous    Next  AGI:  At1g56385.1    Description:  similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT3G57840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83400.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 21109980    to: 21110462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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