Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ATHB12                                                          <--------HAHB4                                                          <---------ICU4                                                          --------->YAB1                                                         <---------ATHB12                                                         --------->ICU4 <---------TOE1(2)                                       <---------YAB1 -----ARR14(2)                                         --------->YAB1 -------ARR10                              ----------->HVH21 -----ARR11(1)                           --------->ANAC55(2)   --------->ANAC46 ---->ARR14(2)               <---------At4g35610       <---------ICU4           <------ZmHOX2a(2) ---->GLK1(2)   --------->TOE1(3)    <---------DAG2   --------->ICU4           <---------ARR11(3) -->TEIL        --------->TOE2(3)    <----------DOF2--------->YAB1         <-----------GT1 --GT1 <---------ANAC46      --------->At4g35610 ----------->GT1  --------->AtMYB61                --   tcttatgttctgtgaatgccttaacaagcttagcagcgactttatgtgacttagtaataatcattacaccactagtatcacgatctaatctattcgctaa  21097700                                            ----------->GT1               --------->ARR14(2)           <---------ANAC55(2)                        <-----------GT1               --------->GLK1(2)          <-------TEIL                                <-------TEIL               <---------ARR14(2)--------->ARR11(3)          <---------TOE2(3)<---------YAB1 ------->YAB1 <---------GLK1(2)  <---------ARR11(3)  --------->YAB1      ----------->GT1   atgatactcactcgaagaatctgaaaatcgaattagattttagattcagtaacattgagaattgacgaaggaaattagttattttagattcactcaccaa  21097800                                                                  <------MYB46(1)                                                                  <------MYB83                                                                  <---------ANAC55(2)                                           <----------DOF2        --------->ANAC55(2)           <---------At4g35610            <---------DAG2         --------->MYB59            <--------           --------->At4g35610      --------->YAB1             <---------MYB52(1)  ----------->GT1         <------ZmHOX2a(1)--------->At4g35610           <---------At5g28300   <---------ANAC46 <-----   gaacaatttgaggagcagagcgaagaacagcttcacaataaacaccttttggtttattcacagccattaggtattcgtcttcgtatagtatatcgtctct  21097900                                                                                    --------->CCA1(2)                            <---------HSFC1(2)                                     <---------ARR14(2)                            --------->HSFB2a(1)                                  ----------->HVH21                            <---------At4g35610                                <---------At4g35610                            --------->HSFC1(2)           <----------DOF2       --------->At4g35610                           ------->TEIL   --------->At4g35610                <------ZmHOX2a(1) -CCA1(2)               <---------REM1(1) <---------At4g35610        <---------AtMYB61 ----ANAC46          <---------YAB1    <----------DOF2<---------ARR11(3)--------->ALFIN1     <-------   tgtaagattgaagagacttgattttgatgaagcttccattgctcttctgagttcaatgtctttggagattggaggtggaggagctgatatgggttttggg  21098000                                     <---------WOX13(1)                                   --------->ATHB12                                  <---------YAB1                                <----------DOF2                          <---------AtLEC2                      <---------ANAC58                      <---------ANAC58                     --------->HSFB2a(1)                     --------->At4g35610                     <---------HSFC1(2)                     --------->HSFC1(2)                                                           <--                     <---------At4g35610                             <---------AHL20(2)           ---            <---------ZAT14    <---------ANAC46                  --------->ATHB12                 <--   <---------TOE2(3) <---------HSFB2a(1)    ----------->GT1     --------->ICU4            <------ZmHOX2a(1)   <---------YAB1  <--------P  <---------ANAC58                 <---------YAB1       --------->ALFIN1 --ANAC46   --------->ZAT14    <---------ANAC58              <---------YAB1       --------->DAG2  ---   taattgagattgagttcagaggtagcttccatggctttgattgggattgcaaaatagggttttgtgattattgaatttgcagagaaggtgaaggagaaga  21098100                                                                                  ------>ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                             --------->DEAR3(2)                                                                             --------->MYB46(3)                                                                           ------>MYB46(1)                          *TSS  <----------DOF2                            --------->MYB52(1)      <---------ZAT2    ------->TEIL                                       ------>MYB83             -      --------->ZAT2    <-------TEIL     ----------------->AGL3          <---------MYB59            < -------HSFC1(2)    --------------->AtSPL3--------->TOE2(3)              ------->GAMYB       -------- ------>HSFC1(2)    <---------------AtSPL8<---------------AGL15        -------->P<------ZmHOX2a(2)<-- -------HSFB2a(1)   --------------->AtSPL8<---------DAG2              --------->MYB52(1)     <------- ------>HSFB2a(1)   <---------------AtSPL3--------------->AGL15   --------->ZAT6<---------ARR14(2)---   agtttcgaagcagggacatttgtatgtacgtcttctttctctaacctttttaagttatacgtttataaacactaaccgaaccgatccgaaccaaaatagt  21098200              <---------SPL7            --------------->AtSPL8    <---------AHL20(2)    --------->AHL20(2) -------->AHL20(2) ---------AHL20(2) ------->AtSPL8                    <---------ZAT6 -------ANAC55(2)                <---------ANAC46          <---------ARR14(2)                -------- --------AtSPL8 --------->SPL7   <---------ANAC58          --------->ARR14(2)                <------- ------>ANAC55(2)                <---------ANAC58          --------->GLK1(2)        --------->YAB1   acttaattaaaaacaccgtaccatatatatggtttgagtgtaacttatatcggataaaccgaatccgaatcaaatcgaaaacacactgatactcgaattc  21098300                           <---------ANAC58                   ------>MYB46(1)                   ------>MYB83                --------->MYB46(3)              ------>MYB46(1)              ------>MYB83<---------------AtSPL3            <---------MYB59<---------ANAC58            <---------MYB111(1)           <-----------GT1            --------->MYB46(3)        --------->YAB1                                        <--------          --------->SPL7  <---------------AtSPL8 --------->MYB46(3)                <---------AHL20(2)        <---------SPL7    --------------->AtSPL8--------->SPL7                     --------->AHL20(2)      --------------->AtSPL3         <---------YAB1                        <---------At4g35610      --------------->AtSPL8    --------->ZAT6 ------>MYB46(1)             --------->At4g35610 ->ARR14(2) <---------MYB46(2)--------->SPL7   --------->MYB52(1)     <------------CBF      --------- --ARR14(2) --------->AtMYB61--------->PCF2    ------>MYB83   ---------->DOF2     --------->YAB1   gaatcgaaaccgtaccaaaccatccatttgggtaccactataataaaccgaacgactccgaaccaaaagctggattgagccgaattttaatccgaattcg  21098400                                                       ---------->DOF2                                           *TSS     --------->AHL20(2)                                           --------->TOE2(3)                                       --------->AtMYB61   ----------->GT1                    <---------MYB52(2)      ----------->GT1 -ARR14(2)      --------->ANAC46    --------->TOE2(3)<---------AHL20(2) ---------->DOF2 >ARR14(2)    <-----------GT1--------->YAB1--------->TOE1(3)--------->GLK1(2)   aaaaaccgaaaaatttatacgacttcgtttctcataaaccacaaaccctaactattaaaaagaatcgaaaaaatcaaagttctgaacttctgatcaattt  21098500                                                                             <---------At1g77200                 --------->At4g35610                                         <---------DREB2C(2)               <---------ICU4          --------->YAB1                        <---------DEAR3(1)               --------->YAB1         <-------TEIL                           <---------RAP2.3(3)              <---------ATHB12      --------->ARR14(2)                      --------->RAP2.6(3)          <---------MYB52(1)        <---------ARR14(2)                     <-----------HVH21         --------->TOE1(3)      <---------At4g35610                <-----------GT1      <-------TEIL         --------->TOE2(3) <---------HSFB2a(2)                <---------ANAC58 <---------At4g35610        ----------->GT1    --------->HSFB2a(2)                <---------ANAC58 --------->At4g35610       <---------YAB1   <---------ARR14(3)                    <---------ANAC46 <-------GAMYB       <---------TOE1(3)<---------ARR11(3)                  --------->ARR11(3) <------NtERF2 --------       <---------TOE2(3)--------->ARR11(3)            --------->YAB1      <-----------RAV1(1)<-------   cgatatgttatcgttaatcatcagaaggtctcgaagcagattcatcatccatggaatcaaaatttcttgtaactctctgtcggctgtagattcaagttct  21098600  Previous    Next  AGI:  At1g56345.1    Description:  pseudouridine synthase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO17441.1); contains InterPro domain Pseudouridine synthase; (InterPro:IPR006145) Range:  from: 21096658    to: 21098126    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56350.1    Description:  peptide chain release factor, putative. similar to HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109), translation release factor [Arabidopsis thaliana] (TAIR:AT5G36170.2); similar to HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109), translation release factor [Arabidopsis thaliana] (TAIR:AT5G36170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69654.1); contains InterPro domain PCRF (InterPro:IPR005139); contains InterPro domain Peptide chain release factor 2; (InterPro:IPR004374); contains InterPro domain Class I peptide chain release factor; (InterPro:IPR000352) Range:  from: 21098443    to: 21101653    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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