Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--      <------ZmHOX2a(1)                                                                          <---   <------ZmHOX2a(1)      <-------GAMYB                                                       <------  <------MYB46(1)        <---------ANAC58                                               <---------ARR14(2)  <------MYB83           <---------ANAC58                                    --------->ETT(2)-------- --------->MYB111(2)    --------->ZAT18                                     --------->HSFB2a(2)  ---- --------P              <-------TEIL       <---------YAB1                   <---------HSFB2a(2)<----- ----ANAC58         --------->DAG2        *TSS    <---------GLK1(1)      --------->ARR14(2) --------- ----ANAC58        ---------->DOF2    <------ZmHOX2a(1)                  <---------ARR14(2)<---------LBD16 ------WRI1  <------ZmHOX2a(1)<---------YAB1 <-----------GT1      ----------->HVH21     --------->ARR14(2)   tggtaggaggagagaggaagagaaagtgcgttgtgaatgaggactattatcgatttctcagaaatggtgagaccggttctcgacattccagttcccggtt  21078600                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                         --------->MYB111(1)                                                                                         <---------AtMYB61                                                                                         --------->MYB111(2)                                                                                         --------->MYB46(2)                                          <---------ANAC55(2)                            <---------MYB46(3) --------->ATHB12                   <---------AHL20(2)                                  <--------P -----GAMYB--------->LBD16--------->ARR14(2)                                            <---------MYB55(1) ------MYB46(3)          <---------MYB52(1)             <---------YAB1                 <---------MYB52(1) ---MYB52(1)<---------MYB52(1)     --------->AHL20(2)--------->GLK1(2)                 <-------GAMYB ->LBD16  <---------ANAC46<---------ARR14(2)<---------CCA1(2)    ----------->GT1     --------->LBD16 ----->MYB52(2)       <---------LBD16     --------->TOE1(1)<---------WOX13(1)       <---------LBD16 ----MYB52(1)   <---------YAB1------------>CBF      <---------GLK1(2)            --------->ARR14(2) >LBD16  <---------LBD16--------->LBD16   --------->ANAC55(2) ------->TEIL       <---------ARR14(2)   tgttgatttgttccggttatcagtcccggttcttcaattttatctcgtatcatcgattctgatggaccggttaacaaattccaaatcccggttggtattt  21078700                                 --------->ARR14(2)                                 <---------ARR14(2) --------->LBD16                         <---------WOX13(1)        <---------LBD16                       -------->HAHB4           <---------ARR14(2)                <---------HSFB2a(2) --------->HSFB2a(2)               --------->LBD16             <----------DOF2------->TEIL        --------->ARR14(2)  <---------LBD16              ----       <-----------GT1 --------->ATHB12  --------->GLK1(1)   <-----------GT1                     <---     <---------YAB1   --------->ICU4--------->HSFC1(1)<---------MYB52(1)                 ---------->ID1 ----------->GT1--------->HSFB2a(2) <---------HSFB2a(2) <---------MYB46(3)               <---------MYB52(1)   gtctggtattatcgactttcagaaatgatggaccggttctcgaatttccaaatcccggtcgtttttctcttccggtttatagtcgcaattcgttgttttc  21078800                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                            ---------                                                              <---------ANAC58              <--------           <---------ARR14(2)     --------->ATHB12            <---------ANAC58             <-------GAMYB           --------->ARR14(2)     <---------MYB46(3)--------->LBD16                       <---------MYB46(3)      <-----------GT1           <---------MYB52(1) --------->LBD16       ----------->GT1  --------->MYB52(2)    <---------YAB1    <---------ATHB51            <---------LBD16      <---------LBD16   <-------TEIL ----------------->WRI1     ------->TEIL   --------->YAB1     <---------ANAC46       --------->LBD16 -------DOF2          --------->ICU4      <-------TEIL   <-----------RAV1(1)       <---------LBD16   tttggtattatcggttttgcagaaattatggaccggttattggattcatattcccggttttgttgtgtgtttgtccggtttatagtccgggttcgttgct  21078900                                --------->HSFB2a(2)                                <---------HSFB2a(2)                               <---------LBD16     *TSS ------DOF2               --------->AHL20(2)      --------->WOX13(1) ----ANAC58               <---------AHL20(2)    ------------>CBF ----ANAC58              <---------AHL20(2)     <---------YAB1 ->ID1            <---------TOE2(2)          --------->AHL20(2)                                  ---- -MYB52(1)        <---------TOE1(2)          <---------AHL20(2)                           <-------TEIL   ttctctgagtttgtatttcttatgttatttatttctggagccctaaatttatcaatcgaacagagcaaatcgtttccttcttccgaacagagttcatcat  21079000                                               ------>ZmHOX2a(1)           <---------At4g35610        <--------P           --------->At4g35610      --------->LBD16                                --------->DAG2           --------->ZAT2          --------->HSFB2a(2)                            ---------->DOF2      <------NtERF2                <---------HSFB2a(2)                           --------->CCA1(2)     --------->LBD16         --------------->AGL15                        <---------TOE2(3)    --------->DEAR3(1)       <---------------AGL15                       <---------DOF5.7(2)      <--   <---------LBD16           <----------DOF2   --------->LBD16           --------->MYB52(1)  -------- --------->DEAR3(1)     <<<<<<<<<TBF1<---------MYB52(1)               --------->TOE2(3)      <------- ----->MYB46(3)      <<<<<<<<<TBF1<---------LBD16           <----------DOF2     --------->ARR11(3)<--   ccatcgccggagtagctgtcttcttcttcttctttttccggtaagtttcctgagaattagttctttattcttcattaacgaagataaaggagacatattt  21079100                                                                  ----------->GT1  <---------TOE2(3)                                             --------->ZAT18  <---------YAB1                                            <---------------AtSPL8<-----------RAV1(1) -------ANAC58                                   <------MYB46(1)--------->ZAT14   --------->ALFIN1 ->ARR14(2)                                      <------MYB83   <---------ZAT14 <---------ANAC46 --ARR14(2)                          <---------GLK1(2)   <---------ATHB12      <------NtERF2<-------- -------ANAC58<------------------------ANAC81   --------->MYB59 <-------TEIL <---------DEAR3(1)   gcttaagattgctctctgtttcaattctctagtttcttaaattctccaatttggttccaatcgaagtacagtatattggtcgtcgtgttgcatttcgatt  21079200                                 --------->YAB1                                <---------ATHB12                              --------->WOX13(1)                         ------>ZmHOX2a(2)                         =====================================HOX2a_HOX2a                           -                        <---------GLK1(1)                                                        <---                        --------->GLK1(1)                                                     <------                        <------ZmHOX2a(2)                <------ZmHOX2a(2)                <----------DOF2                       --------->ARR11(3)              <------ZmHOX2a(1)                 <---------ANAC58                       <---------ARR11(3)      --------->GLK1(2)                         <---------ANAC58 -YAB1                 <---------AGP1         <---------GLK1(2)                          <---------ANAC46   gaagtttgtttatgggttttcttaagatctctcaatcagtagggtttagaatctataggatcaaatttagtttcaaactttcaatctcgttgctttaagc  21079300                                                                                                 <---                                                                                          <---------TOE1(3)                                                                                          <---------TOE2(3)          -------->P  -------->P                 =====================HOX2a_HOX2a      <---------ANAC46          ------->TEIL------>MYB46(1)            ------>ZmHOX2a(2)            --------->ICU4     <--- -------->YAB1        ------>MYB83             --------->ARR11(3)        ----------->GT1  ----------- -------DOF2     <---------ZAT18       ---------->DOF2         <------ZmHOX2a(1)    <---------RAP2.6(2) ---TOE1(3)      --------->ZAT18--------->ZAT6 <---------ARR11(3) ----------->GT1 <-----------RAV1(1)   tttaataacatctacctagtgacctacaagcttagcactagtaaagtatgatcttactgatcagaggattgtaatttgtaaatattgtggctgaggtttg  21079400                                                           ------>ZmHOX2a(2)                                                         <---------ARR14(2)                                                         <---------AGP1                                                         --------->ARR14(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                        <---------CCA1(2)                          <----------DOF2            <---------LBD16                         <---------ANAC58          ------>ZmHOX2a(2)                         <---------ANAC58         <---------GLK1(1)                         <-------- ------ANAC58      ------->TEIL                  --------->ARR11(3)              --------->YAB1 ------ANAC58 <---------ANAC58                   <---------ARR11(3)     --------->ZAT6   ----------->HVH21 >ARR10       <---------ANAC58               <XXXXXXXXXXXXXXXXXXXXXMIR850       <---------YAB1   cttagtcaaataatgtgcttgcatcttgcttttggtattgctgattttgttgatctctggatcttgttctgtttacagtagtatcatggctatgacatgg  21079500  Previous    Next  AGI:  At1g56280.1    Description:  ATDI19 (Arabidopsis thaliana drought-induced 19). Identical to Protein DEHYDRATION-INDUCED 19 (DI19-1) [Arabidopsis Thaliana] (GB:Q39083;GB:Q56ZC1;GB:Q94AR0;GB:Q9C7K3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 21076542    to: 21078542    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56290.1    Description:  CwfJ-like family protein. similar to CwfJ-like family protein / zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G56900.2); similar to CwfJ-like family protein / zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G56900.1); similar to hypothetical protein OsI_013039 [Oryza sativa (indica cultivar-group)] (GB:EAY91806.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAR87297.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71315.1); contains InterPro domain Protein similar to CwfJ, C-terminal 2 (InterPro:IPR006767); contains InterPro domain Protein similar to Range:  from: 21078951    to: 21082443    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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