Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------At4g35610                                                   <---------ARR11(1)                                              --------->ANAC58              <---------KAN4(2)           <---------HSFB2a(2)--------->At4g35610    --------->TOE2(3)              <----------DOF2 --------->GLK1(2) ------YAB1 <------ZmHOX2a(1) ---------->ID1  --------->ANAC58    ------>ZmHOX2a(1)<---------TOE2(3) --->YAB1--------->CCA1(2)  <-----------RAV1(1)    <---------ARR14(2) --------->ANAC46   tgttaacctagataggaacatccagtttttttgttgtctttatttcagaagcaaatctattacagctcctaaacacaacaagtttaagaatttttcttac  21078100                                                                        --------->AHL20(2)                                                                        <---------ICU4                                                                       <---------ATHB12                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                       <---------ATHB51                                                                     ------>MYB83                                                                     ------>MYB46(1)                                                                 -------->P                        <-                                                              <---------MYB52(2)         --------->ANAC58                                 <---------YAB1           <---------MYB59                --------->ANAC58                          --------->TOE2(3)              --------->ANAC55(2)       --------->DAG2----                         --------->YAB1                  <---------ANAC55(2) <---------ANAC46    ----          --------->TOE2(3)   --------->ICU4    <----------DOF2 --------->MYB52(1)---------->DOF2----   atagctcaaaaacctatatagccagaaacataaatatgagtcaaactgttctttcacttacataactaaccaaataatttcgcataaagtcaagaaaaca  21078200                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                                                                  <------------------                                                                                 <-----------GT1 --------ARR11(3)           --------->DAG2                       <---------At4g35610<---------MYB46(2) ----->ANAC58              ---------->DOF2         <-----------GT1            <---------ICU4 ----->ANAC46       ----------->GT1               --------->KAN4(2)        --------->YAB1    -------- ----->ANAC58    --------->ANAC55(2)   <----------DOF2           --------->At4g35610<---------MYB59   cgatatttgaatcaaactcatgtgataaaaaaagtttgaaactttattcaaatattcccttcttgagagctcaaaaatcaaaattaccaaacttacaaag  21078300                                                      <---------ANAC58                                                      <---------ANAC58                                                 ------>ZmHOX2a(2)                                           <---------LBD16--------->STY1(2)                          --------->ZAT14  ------>ZmHOX2a(2)                                      ---                   <---------TOE2(3)      <------ZmHOX2a(2)                                       ---      ---------->DOF2     <---------ZAT14<---------ARR14(2)                             <----------DOF2 ---WRI1          --------->DAG2         --------->ARR14(2)                    --------->At4g35610--- -->DOF2         ---------->DOF2     ----------------->AGL1     <---------GLK1(1)      <---------ICU4   ctcaaaatcaaagttgacataaaggtactgtagtttctcaccagatcgggatcgaagcgtagctagaaatctcttggaatcagcgtccatctttgcccct  21078400                                                                  ------>ZmHOX2a(1)                                                                  --------->LBD16                                                               <------ZmHOX2a(2)                                                            =============HOX2a_HOX2a                                                            ------>ZmHOX2a(2)                                                           ==============HOX2a_HOX2a                                                           <------ZmHOX2a(2)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                        --------->LBD16                                                       --------->RAP2.6(2)                                      ----------->GT1 <---------LBD16                               <                                   ------->TEIL     --------->ANAC58                           <-----            <----------DOF2   ====================================HOX2a_HOX2a             --------->ATHB12 ------>ANAC58                <------ZmHOX2a(1)     --------->ANAC58                     <---------YAB1 ------>ANAC46                =====================================HOX2a_HOX2a >>>>>>>>>TBF1   <----- ------>ANAC58               <----------ID1 <---------AHL20(2)<---------ARR14(2)     <---------------   acgaaattgtcgaacttttggagcaaatagaaggacgaatttgtaataaatctcaagccggatcgatcctgaatagatgaagaagaagacgatgatttct  21078500                                                                                                  <--      <------ZmHOX2a(1)                                                                          ----   <------ZmHOX2a(1)      <-------GAMYB                                                       <------  <------MYB46(1)        <---------ANAC58                                               --------->ARR14(2)  <------MYB83           <---------ANAC58                                    --------->ETT(2)-------- --------->MYB111(2)    --------->ZAT18                                     --------->HSFB2a(2)  <--- --------P              <-------TEIL       <---------YAB1                   <---------HSFB2a(2)<----- ----ANAC58         --------->DAG2        *TSS    <---------GLK1(1)      <---------ARR14(2) --------- ----ANAC58        ---------->DOF2    <------ZmHOX2a(1)                  --------->ARR14(2)<---------LBD16 ------WRI1  <------ZmHOX2a(1)<---------YAB1 <-----------GT1      ----------->HVH21     <---------ARR14(2)   tggtaggaggagagaggaagagaaagtgcgttgtgaatgaggactattatcgatttctcagaaatggtgagaccggttctcgacattccagttcccggtt  21078600                                                                                          <------MYB83                                                                                          <------MYB46(1)                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         --------->MYB46(2)                                                                                         --------->MYB111(2)                                          --------->ANAC55(2)                            <---------AtMYB61 --------->ATHB12                   <---------AHL20(2)                                  <--------P -----GAMYB--------->LBD16<---------ARR14(2)                                            <---------MYB55(1) ----->MYB52(2)          <---------MYB52(1)             <---------YAB1                 <-------GAMYB ---MYB52(1)<---------MYB52(1)     --------->AHL20(2)--------->GLK1(2)                 <---------MYB52(1) ->LBD16  <---------ANAC46--------->ARR14(2)<---------CCA1(2)    ----------->GT1     --------->LBD16 ------MYB46(3)       <---------LBD16     --------->TOE1(1)<---------WOX13(1)       <---------LBD16 ----MYB52(1)   <---------YAB1------------>CBF      <---------GLK1(2)            --------->ARR14(2) >LBD16  <---------LBD16--------->LBD16   <---------ANAC55(2) ------->TEIL       <---------ARR14(2)   tgttgatttgttccggttatcagtcccggttcttcaattttatctcgtatcatcgattctgatggaccggttaacaaattccaaatcccggttggtattt  21078700                                 <---------ARR14(2)                                 --------->ARR14(2) --------->LBD16                         <---------WOX13(1)        <---------LBD16                       -------->HAHB4           --------->ARR14(2)                --------->HSFB2a(2) <---------HSFB2a(2)               --------->LBD16             <----------DOF2------->TEIL        <---------ARR14(2)  <---------LBD16              ----       <-----------GT1 --------->ATHB12  --------->GLK1(1)   <-----------GT1                     <---     <---------YAB1   --------->ICU4--------->HSFC1(1)<---------MYB52(1)                 ---------->ID1 ----------->GT1<---------HSFB2a(2) --------->HSFB2a(2) <---------MYB46(3)               <---------MYB52(1)   gtctggtattatcgactttcagaaatgatggaccggttctcgaatttccaaatcccggtcgtttttctcttccggtttatagtcgcaattcgttgttttc  21078800                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                            ---------                                                              <---------ANAC58              <--------           --------->ARR14(2)     <---------MYB46(3)          <---------ANAC58             <-------GAMYB           <---------ARR14(2)     --------->ATHB12  --------->LBD16                       <---------MYB46(3)      <-----------GT1           <---------MYB52(1) --------->LBD16       ----------->GT1  --------->MYB52(2)    <---------YAB1    <---------ATHB51            <---------LBD16      <---------LBD16   <-------TEIL ----------------->WRI1     ------->TEIL   --------->YAB1     <---------ANAC46       --------->LBD16 -------DOF2          --------->ICU4      <-------TEIL   <-----------RAV1(1)       <---------LBD16   tttggtattatcggttttgcagaaattatggaccggttattggattcatattcccggttttgttgtgtgtttgtccggtttatagtccgggttcgttgct  21078900                                <---------HSFB2a(2)                                --------->HSFB2a(2)                               <---------LBD16     *TSS ------DOF2               <---------AHL20(2)      --------->WOX13(1) ----ANAC58               --------->AHL20(2)    ------------>CBF ----ANAC58              <---------AHL20(2)     <---------YAB1 ->ID1            <---------TOE1(2)          <---------AHL20(2)                                  ---- -MYB52(1)        <---------TOE2(2)          --------->AHL20(2)                           <-------TEIL   ttctctgagtttgtatttcttatgttatttatttctggagccctaaatttatcaatcgaacagagcaaatcgtttccttcttccgaacagagttcatcat  21079000  Previous    Next  AGI:  At1g56280.1    Description:  ATDI19 (Arabidopsis thaliana drought-induced 19). Identical to Protein DEHYDRATION-INDUCED 19 (DI19-1) [Arabidopsis Thaliana] (GB:Q39083;GB:Q56ZC1;GB:Q94AR0;GB:Q9C7K3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 21076542    to: 21078542    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56290.1    Description:  CwfJ-like family protein. similar to CwfJ-like family protein / zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G56900.2); similar to CwfJ-like family protein / zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G56900.1); similar to hypothetical protein OsI_013039 [Oryza sativa (indica cultivar-group)] (GB:EAY91806.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAR87297.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71315.1); contains InterPro domain Protein similar to CwfJ, C-terminal 2 (InterPro:IPR006767); contains InterPro domain Protein similar to Range:  from: 21078951    to: 21082443    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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