Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ATHB12          <---------AHL20(2)         --------->AHL20(1)         <---------AHL20(1)         <---------AHL20(2)         --------->AHL20(2)                                       --------->AHL20(2)  --------->LBD16                                               --------->ANAC58 --------->ANAC46                                  <---------CCA1(1) --------->LBD16 ------>ZmHOX2a(2)                 <---------RVE1(1) <---------HSFB2a(2)     --------->At4g35610      <---------ARR11(3) --------->HSFB2a(2)     <---------At4g35610      --------->AHL20(1)            --------->ARR11(3) ---------LBD16--------->ARR11(3)                 --------->ARR11(3)    <---------AHL20(2)     ------ ---------HSFB2a(2)      --------->ZAT2           <---------AHL20(1)   --------->AHL20(2)<---------AHL20(2) -------->HSFB2a(2)    --------->MYB46(3)     ---------->DOF2   --------->ANAC58<---------ARR11(3) --------LBD16 <---------ARR11(3)           --------->ANAC46    ----------->GT1--------->GLK1(1)   ttcccggaaaatttattgatcttgaacagctgaaattgcatcatacacaaaagatatttttagttcaagtaaattaaaacgatatctattttttattcaa  21060800                                                                                      --------->GLK1(2)                                                                                      <---------ARR14(2)                                                                               --------->ANAC58                            <----------DOF2                                    --------->ANAC58                   <---------DAG2                                      <----------DOF2--------->ARR14(2) ---->DOF2      <-----------GT1                   <---------ANAC55(2)  <---------DAG2--------->RVE1(1)   agctaactcatagaaatctaacctttcgagcattatcgatgagaagagagtcacataaacatcgataaatctcctttttggacgaaaaaatccgatggtg  21060900                                                                             --------->LBD16                                                                            --------->ANAC46                                                                           <---------LBD16                                                                          -------->P                                                                          --------->MYB52(1)                                                                         --------->MYB52(1)                                                                        ----------->HVH21                                                                       <---------MYB52(2)                                                                      <---------At4g35610                                                                      --------->LBD16                                           <---------DAG2            --------->LBD16               --                                           <----------DOF2           --------->ANAC58              --                                  ----------->GT1                    --------->ANAC58            ----                    <----------DOF2--------->At5g28300          --------->ATERF1(1)              <---            --------->CCA1(2)   --------->SPL7                 <---------ATERF1(1)  --------->DEAR3(1)   atcagtagattgagagatgaggcttttgtaatgggacggtagaaacttttcccatacaaaatcggagtctcccgctaaccggaacaccgaagagacttcc  21061000            <---------At4g35610                          ----------->GT1           ------->TEIL                                  --------->ANAC46                   <------ZmHOX2a(2)         <-------TEIL                         --------->ANAC58                             --------->ARR14(2) --------->HVH21                 --------->ANAC58        --------->ANAC55(2)               <---------ARR14(2) --------->TGA1--------->At4g35610  --------->ARR11(3)   <---------At4g35610        <---------ANAC58 ----->At4g35610                 --------->ANAC58      <-----------RAV1(2)          <---------ANAC58- ------At4g35610         ----------->HVH21    --------->ANAC58   --------->YAB1<----------DOF2 ------   gatgacgaaaatgcatcggctggagatgtgaaggcaaggatgttggctacgcatgcttcaggtaacatcatcatcttcttccttttgtttgccgatcgag  21061100                     <---------YAB1                   <---------ICU4                   --------->YAB1                   -------->HAHB4                   --------->ATHB12             --------->YAB1             --------->TOE2(3)                                           <---------MYB52(1)           <---------ARR11(3)                                          <---------ANAC46         <---------AHL20(2)                                            <---------ANAC58    --------->AHL20(2)                                    --------->GLK1(2)  ----------->GT1 <---------YAB1          --------->AHL20(1)           <---------ANAC58 --------->DAG2   <---------ATHB12        <---------ARR11(3)       <---------GLK1(1) --------->DOF2   --------->ICU4          --------->ARR11(3)       --------->GLK1(1)     ----------->GT1 ----->GT1 --------->ARR11(3)         ---------->DOF2    <---------GLK1(2)  <---------ANAC46   taaaaagttaataaatcttaatgattaatcttatgaaatagaaagatattgagttttcagaatttgaagaattccgttttgtgagtgtatatagtgaatt  21061200                                                                           <------------CBF                                                                          --------->ATHB12                                                                          <---------ICU4                                                                         <---------YAB1                                          *TSS                           --------->ICU4                                        <---------ANAC58        --------->AHL20(1)         --------->WRKY38(1)                           <---------WOX13(1)                   --------->ARR11(3)         ----------                         --------->YAB1 <---------AtLEC2       <-----------TBP           --------->ZAT2            <---------AHL20(2)          <---------ANAC58      --------->GLK1(2)          --------->At4g35610     <----------DOF2    <---------YAB1<---------YAB1   ----------->GT1<---------ZAT6     <---------At4g35610   agtgatgctttgatttttttgtagcgatgatagatgaagtatgcttggagatagagatggtgagaatatatagtgatcattggcatatttctgctgacca  21061300                                                  <---------WRKY18(1)                                                 --------->WRKY38(1)                                                 --------->WRKY12                                               <-------GAMYB                                              --------->MYB55(2)                                           <---------ANAC46                                           <------MYB83                                           <------MYB46(1)                                          <---------AtMYB61                                          --------->MYB111(2)                              <---------AHL20(1) --------->WRKY45                              --------->AHL20(1)<---------WOX13(1)                           <-----------TBP--------->MYB46(2)                           <---------AHL20(2) <---------MYB46(3)                             --------                  <---------YAB1 <---------AHL20(2)      --------->YAB1    <---------HSFB2a(2)                 --------->AHL20(1)       <---------MYB46(3)               --------->HSFB2a(2)         ----------->GT1   --------->AHL20(2)<---------AtMYB61  --------->ATHB12             --------    ------------>CBF <---------TOE2(3)    --------->MYB55(2)--------->AHL20(2)     ---------->DOF2 ->HVH21<---------ATHB12 <-----------TBP  --------->MYB111(1)---------->DOF2 ---------->DOF2 --------   ttttagaccaatggtcaaatattatggatttatatattatttgtttggtggttgaccaaaaataaaagattggccttccaaaagagaaagttcacgcgta  21061400      --------->ARR11(3)      <---------ARR11(3)    ----------->ARR10                                                                       --------- ->ANAC58                                                          ------->TEIL             <-------- ->ANAC58                                                 --------->TOE1(2)        --------->ZAT14 ->ANAC46     ------>ZmHOX2a(1)   ----------->GT1        --------->YAB1       ---------->DOF2<-------   agagaaaagatttgtccttcgcttactagtatttgttagtaaaacgtttagagacttaaacatgagacgaacatatttgtaaaagtatagtcattaaaat  21061500                                                               --------->TOE2(3)   --------->AHL20(1)                                                               --------->YAB1      --------->AHL20(2)                                                           <---------MYB52(1)      <---------AHL20(2)                                                        <---------YAB1         --------->AHL20(1)                                                       -------->P              --------->AHL20(2)    --------->AHL20(2)                            <---------YAB1               <---------AHL20(2) >AHL20(2)                                        <-----------GT1          <---------AHL20(2) -AHL20(2)           <---------AHL20(2)         --------->YAB1<---------YAB1--------->YAB1 --YAB1   <-----------GT1                      <---------YAB1 ----------->GT1  <---------AHL20(1)   agcccataaatttcacaaactattttttttgtcaaaaatttcataaactattatacttaccattatgttaattctaaataataaattttttagtttctca  21061600                                                                           <---------ANAC58                                                                           <---------ANAC58                                                 <-----------GT1           <---------ANAC46                                                --------->AHL20(2)      <----------DOF2          <---------AHL20(2)        <---------ARR11(3)           --------->AHL20(2)         --------->AHL20(2)         --------->ARR11(3)      <---------AHL20(2)         <---------AHL20(2)        <---------CCA1(2)        --------->AHL20(2)   atttttaaaaattaaatattctgcatttctatttagtatatcttactaaattaactataagtttaaatgaaatactttcttggaaaacagtatttttagt  21061700  Previous    Next  AGI:  At1g56240.1    Description:  ATPP2-B13 (Phloem protein 2-B13); carbohydrate binding. Identical to F-box protein PP2-B13 (PP2B13) [Arabidopsis Thaliana] (GB:Q9C7J9); similar to ATPP2-B14 (Phloem protein 2-B14), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT1G56250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65691.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 21059897    to: 21061242    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56242.1    Description:  other RNA Range:  from: 21060066    to: 21061480    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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