Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ARR11(3)                                              --------->ICU4               --------->ARR11(3)                                         ----------->GT1              --------->RVE1(1)                 ----------->GT1         --------->ICU4              --------->CCA1(1)                <---------------AtSPL8<---------AHL20(2)  ------------          --------->AHL20(2)             ---------->DOF2          ----------->GT1       -------------        ----------->GT1        <---------AHL20(2)  <-------TEIL  <------ZmHOX2a(1)      <------------   tgatgacataatgtaaatatctcatatttgtgttttattcatataaaggagagtacatatagatttaggagttaattagtaattagggggactagaaatg  21054300                                                               ----------->HVH21                                                              --------->LBD16                                                             --------->ANAC46                                                             <---------ANAC55(2)                                                             <---------TGA1a                                                             <---------O2                                                             --------->O2                                                             --------->TGA1a    --------->YAB1                                           ========================bZIP_DOF   <------ZmHOX2a(2)                                         --------->ANAC55(2)  <---------ARR11(3)     <---------ANAC58                    ========================bZIP_DOF  --------->ARR11(3)     <---------REM1(1)      <---------AHL20(2) <------ZmHOX2a(1)       <---------ANAC58      --------->AHL20(2)                      <----------DOF2 --->AGL15               <---------ANAC46      <---------AHL20(2)                 <-----------GT1 ---->AGL2     <-------TEIL<------NtERF2----------->GT1 <---------ZAT18       --------------->AtSPL8 -----AGL3 <---------TOE2(3)      ----------->RAV1(1)   --------->ZAT18   <----------DOF2      <-----   gaaggatcatattgagattcaaatttggcgtagcaacaacatatgtaaaataaatgagcgctcccgtgacaaattccttttttgtaaccctttgatgtgc  21054400                              --------->ANAC58                              --------->ANAC58                 <---------ZAT18        --------->At4g35610                 --------->ZAT18        <---------ZAT2                <---------ANAC58        --------->ZAT2    ------>ZmHOX2a(1)                <---------ANAC58   ----------->HVH21   ---------->ID1  <---------AHL20(1)          --------->ANAC46         <-----------GT1  --------->AHL20(2)      <---------ANAC58         <---------DAG2           ----------->GT1     -----  <---------AHL20(2)      <---------ANAC58----------->HVH21               ---------->DOF2     <------  --------->AHL20(1)     <---------ZAT18<---------At4g35610   <---------AHL20(2)   ----------->GT1 --TEIL         <---------ANAC46  <-----------HVH21<----------DOF2<-------TEIL--------->AHL20(2)-----   atattttattgcattgtggtgtgctagtgcatgcgccatcacagctgactgggctttttcctatttgattcatatgtaaagaaaatagaaatattgtaac  21054500                          <---------YAB1                       <---------AHL20(2)                       --------->AHL20(2)                   --------->AHL20(2)                                                               -                   <---------AHL20(2)             --------->TOE2(3)                                 -                --------->AHL20(1)              <---------ARR11(3)                                 <-                <---------AHL20(1)          --------->ANAC58                                       <- ---->ANAC58 --------->AHL20(2)             --------->ANAC46         <---------GLK1(1)             -- -----GT1    --------->YAB1--------->YAB1   --------->ANAC58         --------->GLK1(1)             -- ---->ANAC58<---------ATHB12             --------->TOE1(2)         <------ZmHOX2a(1)             <---   gaaattgatggtcaataatatataatttatcatggaaattgcacatacgaaatctcaaatttcttaagaggatttcaaatccaaaaaaaaaaaaacatgt  21054600                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                               --------->ANAC46                                                  ----      <---------ATHB51        --------->ZAT14                                                    <---      --------->ICU4          <---------ZAT14                                                    <--- -------->TOE2(3)           --------->ZAT14                                                      ---- -------->TOE1(3)           <---------ZAT14                   <---------ICU4               <---------HSFB2a(2) --------ANAC55(2)        --------------->AtSPL8             --------->ICU4          <---------TOE1(3) --------ANAC46 <------ZmHOX2a(1)                       ----------->GT1              <---------TOE2(3) --------->RAV1(2)        --------------->AtSPL3       ----------->GT1        --------->ICU4     <--- ------->At4g35610 <------ZmHOX2a(1)               --------->At4g35610     <---------YAB1  --------->HSFB2a(2) --------GT1 <-----------RAV1(2)                --------->At4g35610--------->TOE2(3) <---------YAB1--   tacctgaaattatgggcaggaggatgagactgtacaccatcaacgaagatagcagaagaggtaaaaatttcttaattgtcattagttatggttttagaag  21054700          <----------DOF2          <---------DAG2         ------>MYB46(1)               <------MYB46(1)       <---------ALFIN1          ------>MYB83                  <------MYB83      --------->MYB46(3)         -------->P                   --------------->AtSPL3   --------->MYB46(3)       <-----------GT1                   --------------->AtSPL8 ----ZmHOX2a(2)            <-----------GT1                    --------->MYB59 ------ARR14(3)           <---------AHL20(2)                  --------->MYB111(1) ------ARR11(3)       <---------AHL20(2)                      <---------------AtSPL8 ----->ARR11(3)      --------->AHL20(2)               ---------->DOF2 ----->ARR14(3)      --------->ARR11(3)              --------->YAB1 ------AGP1          <---------AHL20(2)             <---------ATHB12 --------ARR10       <---------AHL20(1)          --------------->AGL15 ----->ARR14(2)      --------->AHL20(1)          <---------------AGL15       <------------CBF ------ARR14(2)      <---------ARR11(3)         ------------>CBF  <-------TEIL ---->ZmHOX2a(2)   --------->GLK1(2)            ----------------->AGL3     <---------YAB1    --------   atctcacaaccactttttgagaatatattttaacctacagggaaaacaaaaccaataaaagtattaggtacaaaatcaacattgagtttaagtaagtata  21054800                                                                       <-----------GT1                                                                       <<<<<<<<<GT-1                 --------->YAB1                                      <---------WOX13(1)              <----------DOF2                                   <------------CBF  <----------DOF2  --------->CCA1(2)         <---------YAB1               <-----------TBP  <---------DAG2 <---------ARR11(3)   <---------TOE2(3)          --------->YAB1>>>>>>>>>EIN3  <---------ANAC58<------ --------->ARR11(3) <---------AHL20(2)   ------>ZmHOX2a(1) <---------AHL20(2) <---------ANAC58<------ ->YAB1       --------->TOE2(3) <-----------GT1<---------ARR11(3)  --------->ATHB12        <---------YAB1   agagatatgatgttttctttaataaatgttattcttacatttcctacaaaatcatacatatttatacattgatttacctttcgtctttgtgatattatac  21054900                                                                                        --------->ARR11(3)                                                                                        <---------ARR11(3)                                                                                       <---------CCA1(2)                                                                                      --------->AHL20(1)                                                                                      <---------AHL20(2)                                                                                      <---------AHL20(1)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                 <---------YAB1                        <---------ANAC58                                       --------->YAB1                        <---------ANAC58                                       -------->ATHB1                    <---------WOX13(1)                                         --------->ATHB51                   <------------CBF                                            <--------HAHB4                 <---------YAB1                                                <---------ICU4             <---------ANAC58                                                 --------->ICU4-------->P             <------------CBF         ----------->TBP                         <---------ATHB12             <---------ANAC58         --------->AHL20(2)                      <---------ATHB51 -----GT1   --------->ATHB12        <-----------TBP             <-----------TBP--------->AHL20(2) ---YAB1 <------------CBF   <---------YAB1 <-------TEIL<-------TEIL       ------------>CBF <---------   tagttacaaagaattgattgtgattgtcttgtgaatgcatatatatacatgtttacatacatttgtatatatagattccaattattaatatatctaccat  21055000                 -------->P                ------->GAMYB               --------->MYB46(3)                                                    <---------TOE2(3)               <---------MYB111(2)                                          --------->AHL20(2)            <---------WRKY38(1)                                             <---------AHL20(2)            <---------WRKY45                <---------ICU4       ----------->HVH21   <---------TOE1(3)            <---------WRKY12       ----------->GT1             <---------AtLEC2     ---------->DOF2    <---------YAB1 --------->TOE2(3)     <-----------GT1<-----------GT1  <---------AHL20(1)  <---------AHL20(2)             ---------->DOF2 --------->ANAC55(2)     --------->AHL20(1)         < --GT1     --------->WRKY18(1)----------->GT1    <---------ANAC55(2)    --------->AHL20(2)  ---------   gtttttatttttggtcaacaacctctacaatatagtaaagtattaactattacataataaactttccatgacaaatatataaattttaaagttttaaagg  21055100                                                            --------->AHL20(1)         <----------DOF2                                                            <---------AHL20(1)        --------->TOE2(3)        <---------AHL20(2)                            --------->TOE2(3)        <---------AHL20(2)       <---------AHL20(2)                             --------->YAB1          <-----------GT1    <---------ICU4      <---------AHL20(2)           ----------->GT1      <---------AHL20(2) --------->YAB1        --------->AHL20(2)            <---------YAB1       <---------YAB1 -------TEIL--------->YAB1                        <---------YAB1       <---------AHL20(1)           < ->DOF2--------->AHL20(2)     ----------->GT1 <---------GLK1(2)        --------->AHL20(1)        ----   gattcataattttataatctttctattttatatggtcaatatttcttagattattatgttaatatttttaaaaaatattatttcatttcctttacaaata  21055200  Previous    Next  AGI:  At1g56233.1    Description:  similar to LCR46 (Low-molecular-weight cysteine-rich 46) [Arabidopsis thaliana] (TAIR:AT5G48945.1); contains domain PD694200 (PD694200) Range:  from: 21054205    to: 21054682    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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