Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->MYB52(1)                                 <---------AHL20(1)                                 <---------AHL20(2)                                 --------->AHL20(2)                                 --------->AHL20(1)     <---------AHL20(2)                                --------->AHL20(2)   <---------AHL20(2)                         --------->TOE2(3)          <---------AHL20(2)                        <---------ANAC46            --------->AHL20(2)                        --------->ANAC46<---------TOE2(3)                        <---------ANAC55(2)     <---------AHL20(2)           --------->ATHB12     <---------AHL20(2)  <---------AHL20(1)          --------->ICU4----------->GT1<---------At5g28300                             <----------DOF2      --------->AHL20(2)--------->ANAC55(2)     --------->AHL20(2)                <-----------GT1 -------->GT1          <---------TOE2(3)<---------TOE1(3)<---------AHL20(2)--------->AHL20(2) ------AtMYB61        <-----------GT1 <-----------GT1--------->AHL20(2)    <---------AHL20(2)   tggtgaaaaaaaatgatttagtatttacgtaaaattaaatttacggttttttaatttttttatttttctggcatgatataaattttgcgattttttggat  21046600                                                                                              =======                                                                                             --------                                                                                             <-------                                                                                           ----------                                                                                       --------->At4g35610                                                                                       <------NtERF2                                                                                       <---------At4g35610                                                                                      <<<<<<<<<AtERF-4                                                                                      <<<<<<<<<AtERF-5                                                                                      <<<<<<<<<AtERF-3                                                                                      <<<<<<<<<AtERF-2                                                                                      <---------ERF1                                                                                      <<<<<<<<<AtERF-1                                                                                      ------>NtERF2                                                                                      <---------RAP2.3(1)                                                                                     <---------RAP2.6(2)                                                                                     <---------RAP2.3(2)                                                                                     <---------ATERF1(2)                                                                                     <---------RAP2.3(3)                                                                                     <---------ANAC46                                                                                     <---------DEAR3(1)                                                                                     --------->ATERF1(2)                                                                                    --------->RAP2.6(3)                                                                                    <------NtERF2                                                    --------->MYB52(1)             ------>NtERF2                                     --------->GLK1(1)                             <---------ATERF1(1)                          ----------->GT1          ----------->HVH21              --------->ATERF1(2)                        ---------->DOF2      --------->YAB1                      <---------ANAC58                   ---------->DOF2   --------->At4g35610                         <---------ANAC58               ----------->GT1      --------->ARR11(3)                  <-------TEIL--------->ATERF1(1)               <---------MYB46(3)   <---------ARR11(3)     --------->ARR11(3)   --------->ZAT2<------ZmHOX2a(2)              --------->ALFIN1  ---------->DOF2    ------->GAMYB <-----------HVH21<---------ATERF1(2)   ttttttcaaataagaagtggttaaagaaaagaaaaaaagagctccaatattaactgacagagaacttggtcatatacatacttgctggcggctaagatca  21046700                                                                                                   <-                  --------->AHL20(2)                                                               --             --------->TOE2(3)                                                                   <---            ----------->GT1                               --------->DAG2                       ------       --------->MYB59                                   ---------->DOF2                      <------ ===============HOX2a_HOX2a                          <---------YAB1                       ---------->DOF2 ->ARR11(3) --------->ANAC58                       --------->YAB1         ----------->GT1 =========== --ARR11(3) --------->ANAC58                      <---------ATHB12    <---------ALFIN1=============== ->ARR10 <------ZmHOX2a(1)                      --------->WOX13(1)<------ZmHOX2a(1)   ---------->DOF2   tgaagaggttaggaacgtaaataaacacaaatcgaggggcattttaaactcaatcaagataaagctaaggacacactcgtaaatacaaaaaagaaagcga  21046800                                               --------->ALFIN1                                              ------->MYC4              --------->At4g35610             <-------MYC2          ------->MYC3                        ------->MYC2          <-----------HVH21                   <-------PIF5          <-------MYC3                        <-------MYC4         --------->ANAC55(2)                  ------->PIF5         <---------TGA1a                      ------->MYC3         --------->TGA1a                      <-------MYC3         <---------O2                        <---------PIF3(3)         --------->O2                        --------->PIF3(3)         ===========================MYC_MYB  >>>>>>>>>>HY5                             <---------ALFIN1         <---------ANAC46                    --------->ANAC46                        <---------ALFIN1      <------ZmHOX2a(2)                      <---------TGA1a                      <---------TCP15(1)     <-----------HVH21   <-----------GT1     --------->O2                         <---------TCP20 --------At4g35610    --------->YAB1         --------->TGA1a                --------->ARR14(2) ------->At4g35610 ------->TEIL         <---------ARR14(2)              ----------------->AGL1 <----- --------RAV1(2) <-------TEIL           --------->ARR14(2)       <---------ARR11(3)--------->TCP15(2) ----->RAV1(1)<---------At4g35610   --------->YAB1               --------->ARR11(3)--------->TCP23 ----ID1 <---------ANAC55(2)     --------->At4g35610            --------->CCA1(1) --------->PCF2 ==================bZIP_DOF ===========================MYC_MYB  --------->RVE1(1)<-----------HVH21 -- ==================bZIP_DOF ------->GAMYB    <---------O2 <------ZmHOX2a(2) <---------ARR14(2) ------   cagatgcgatcacgtgagatgcatttataaccctccgatgaaaatccacgtggcactccgatctaaatatctcgaccatatcgggtcccacacttccaat  21046900                                                 ------------>CBF                                                --------->ANAC58                                           ----------->HVH21                                          <-----------TGA1                                          <-----------HVH21                                         <---------O2                                         --------->O2                                         ==================================================bZIP_DOF                                         --------->ANAC58                                         <<<<<<<<<<HY5--------->YAB1                                         <---------TGA1a                                         --------->TGA1a                                         --------->ANAC58                                         <---------ANAC55(2)                                         --------->bZIP60(1)                                         --------->ANAC55(2)                          ------>MYB46(1)--------->ANAC46                 <---------ANAC55(2)     --------->ANAC55(1)                    <----------DOF2                 <---------ANAC58        <---------bZIP60(1)                ------>ZmHOX2a(2)                 <---------ANAC46        --------->bZIP60(2)               <------ZmHOX2a(2)                 <---------ANAC58       ------>NtERF2<---------ATHB12     <---------ARR14(2)            --------->ANAC46 --------->ARR11(3) --------->ANAC58  <---------REM1(1)          <---------ALFIN1------>MYB83<------NtERF2 --------->ANAC58      --------->ARR14(2)    -----    <---------DAG2      <---------MYB59<---------ALFIN1         --------->At4g35610    --------->YAB1 ----ARR14(2)--------->AtMYB61      --------->RAP2.6(2)       <-----------RAV1(2)      <---------ICU4 ---->ZmHOX2a(1) --------->ANAC55(2)--------->ANAC46--------->ANAC58 ------->TEIL --------->AHL20(2) --->ARR14(2)<---------DAG2  <-----------GT1    --------->ANAC46<---------At4g35610   <---------ATHB12   cctcgaccttatccaccttacgtagacctaatatccagtcgccacgtcacacacaatcaacgtctcagatgtacccgatcgcctttaaatcatcgcttcc  21047000                            <---------ARR11(3)                       ----------->RAV1(1)            ------->TEIL    <---------GLK1(2)               <-----------GT1           <---------ARR14(2)                            --------->TOE2(3)          --------->ANAC55(2)           --------->ARR14(2)                            --------->YAB1             <---------ANAC58    ------->TEIL      --------->MYB46(3)           <-----------GT1      ------->GAMYB          <----- ---->TOE2(3)*TSS  --------->REM1(1)             <----------DOF2     <-----------GT1<---------ANAC58   ttcatgaatcgaagaacctctacaacaacagattttaaaaaaccccaaaaactttacattcttaacaatttcaaccctatgggcttacttgatcatctct  21047100                                                        --------->AtMYB61          --------->LBD16                    --------->ANAC58          <-------TEIL                         ------>NtERF2                    --------->ANAC46       <---------ZAT2                         <---------ETT(1)                    --------->ANAC58       <---------HSFC1(2)                    <---------LBD16                 <---------WRKY38(1)       --------->ZAT2                     --------->ZAT2                 <---------WRKY12          <---------HSFB2a(1)                <---------ZAT2                 <---------WRKY45          --------->HSFC1(2)                ------>MYB83       <----        <-----------HVH21                 --------->ANAC58                   ------>MYB46(1) --------       <-----------RAV1(1)   --------->MYB52(1)<---------ANAC46            <---------MYB59   -------- ----------->ARR10<---------ALFIN1        --------->ANAC58          --------->ARR14(2)      --------- ----LBD16   <---------TOE1(2)--------->RAP2.6(3)    --------->ANAC46  <---------ETT(1)   <---------SPL7   gggatgatactgtcgctggtccacggccagagaacggccttggcaagcttcgtaaacaccataccttcagtttccgacctagctccggcaatggtacgcc  21047200                                                                                                    -                                        --------->ANAC58                                            - -----ANAC46              --------->YAB1--------->ANAC46                          <-----------RAV1(1) ->ANAC58              --------->WOX13(1)                           <---------ZAT14      ============ ->ANAC58             --------->AHL20(2)--------->ANAC58            --------->ZAT14      ------>ZmHOX2a(2) >SPL7          ------->TEIL     <----------DOF2              --------->AtLEC2 ------->TEIL   <------   gtgttttgctaaaaactgaaccgattaatcaaactctttaaaacgaaacttaaaattagtaaacatgcactgaagtatttgaatctgttgatcgttctga  21047300                <-------GAMYB                                                                <-------               ------>ZmHOX2a(2)                                                            ------>ZmHOX2a(2)             <---------ARR11(3)                                                             =========       --------->ATHB12                                                                    <------ZmHOX2a(2)      <---------AHL20(2)                                                                   <---------     <---------WOX13(1)                <---------AGP1                       <---------At4g35610    -- ------>ZmHOX2a(1)           ------->TEIL------>ZmHOX2a(2)                  --------->At4g35610------ =====================HOX2a_HOX2a<-----------GT1                            <---------ZAT2 ========== -------->TOE1(3)        <---------TOE2(3)      <---------AHL20(2)     --------->YAB1     <---------- -------->TOE2(3)<---------MYB52(1)<---------ANAC58       <---------YAB1    --------->ZAT2<---------ARR11(3) =======HOX2a_HOX2a--------->ATHB12<---------ANAC58    ------->TEIL --------->WOX13(1)    --------->ARR11(3) ---YAB1     --------->ARR11(3) <<<<<<<<<<GT-3b --------->AHL20(2)<------ZmHOX2a(2) --------->ALFIN1   ttccttaattgattagatcgttgatttgatgtatttttcttgatctggattttaatggatgtgattagatcaatcggaagctggaagtgcgagatcgtac  21047400             --------->HSFB2a(2)            <---------LBD16     --------->ARR14(1)    <---------ARR14(2)                                     --------->MYB52(1)                      <-    --------->ARR14(2)                                   --------->MYB46(3)                  --------    <---------GLK1(2)                             <---------ICU4                        <---------GLK1(2)    --------->ARR11(1)                           <---------YAB1                        <---------ZAT2   <------ZmHOX2a(1)                             --------->ICU4                  --------->ZAT2   ---  ----------->ARR10                            --------->YAB1                    <---------ZAT2   <-- --SPL7    --------->MYB52(1)                 --------->ICU4  --------->LBD16    <---------At4g35610 =========HOX2a_HOX2a                         <---------YAB1<---------LBD16      --------->At4g35610 ------AtSPL3<---------HSFB2a(2)    --------->ANAC58     <---------MYB55(2) --------->At4g35610 ----- ------->ALFIN1                     --------->ANAC55(2)<-----------GT1 --------->ANAC46--------->ZAT2 --->SPL7  -------->P               --------->ANAC46 <---------AHL20(2)--------->ANAC58<---------At4g35610 =========HOX2a_HOX2a      ---------->DOF2  --------->YAB1--------->AtMYB61 <---------At4g35610------ --------SPL14--------->LBD16       --------->ANAC58 --------->AHL20(2)--------->ANAC58--------->At4g35610   ggtgaggattcgctaccggaagaagcagtgaaagttacacgtagtatcatgataattaaaccaccgggttaccaaggcagttcagctccagcttcgcctg  21047500  Previous    Next  AGI:  At1g56220.1    Description:  dormancy/auxin associated family protein. similar to dormancy/auxin associated protein-related [Arabidopsis thaliana] (TAIR:AT1G54070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17488.1); contains InterPro domain Dormancyauxin associated (InterPro:IPR008406) Range:  from: 21047013    to: 21048403    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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