Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(1)        <---------AHL20(2) ------>At4g35610 -------ANAC55(2) -------At4g35610 ----MYB83                    --------->ZAT6 -------->GT1               <-----------GT1 ----MYB46(1)       <---------YAB1 ------>ANAC55(2)  --------->AHL20(1) ----->MYB111(2)   <---------AHL20(1)                                                               - ----->MYB59 --------->AHL20(2)                                                              <------- ----->MYB111(1)   --------->AHL20(2)               --------->TOE2(3)               --------->AtMYB61 ----->MYB52(2)    <---------AHL20(2)   --------->AHL20(1)            --------->AHL20(2)     -------- ------AtMYB61--------->AHL20(2)        --------->ARR11(3)            <---------AHL20(2) --------->AHL20(2) ----->MYB46(2)   --------->YAB1        <---------AHL20(1)            --------->ATHB12  --------->AHL20(1) -----MYB55(1)<---------AHL20(2)        <---------ARR11(3)            --------->ATHB51  <---------AHL20(1) ----MYB52(1)<---------AHL20(2)      --------->AHL20(2)              <---------AHL20(2) <---------ARR11(3)   aggtgactaatttttttaaattataattgtttacactcttaaaatattcaaatttcttaaaattatccaaaattatttgcaatcgaccaaaatatttaaa  21038900                         --------->YAB1              <---------ANAC58      ----------->RAV1(1)----------->GT1      <XXXXXXXXXXXXXXXXXXXXMIR169G*               --------->YAB1 --------->DOF2   <---------ANAC46            -------->ATHB1            <---------AHL20(2)      ----- --AHL20(2)   <---------ANAC58      --------->ARR14(2)      <---------MYB59                     ----- ->AHL20(2) <---------AHL20(2)      <---------ARR14(2)     --------->ANAC55(2)               <-------   cttgaagccaacatttacttgctggaatagtgatttcaaatactcgaattattcataccatacttaactcatattttcttatactctaactatttatacc  21039000                           --------->ZAT14                           <---------ZAT18                           <---------ZAT14                                                          <                           --------->ZAT18                                                          <                         --------->ANAC46                                                       <----                    ------->TEIL                                                                <----                   <---------CCA1(2)                                                         <------- ---->TOE1(3)<---------ARR11(3)        <-----------GT1                                  --------->AHL20(2) ---->TOE2(3)--------->ARR11(3)    --------------->AGL15              xxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ----GT1    <---------CCA1(2)   --------->GLK1(2)  ---------->DOF2    <---------AtLEC2----------->GT1   ttaactactcacatatatcttgtatctactgcacaatctttttacagaaatgaaaaagcctagtgaatgtctgaatggaactactacaatgtaaataact  21039100                                                                                <-----------GT1                                                                              <----------DOF2                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                          --------->GLK1(1)                                                                         <---------ARR14(3)                                                                         --------->ARR11(3)        --                                                                         --------->GLK1(2)       <---                                                                         <---------AGP1      <-------      <---------ANAC58                   ----------->GT1                 <-----------ARR10   --------      <---------ANAC46                --------->YAB1                     <---------ARR11(3)  <-------      <---------ANAC58                <---------ICU4                     <---------ARR14(2)  -------- ---------YAB1                  --------->LBD16                          --------->ARR14(2)  -------- ---------AHL20(2)             <---------ANAC55(1)                    <---------TOE2(3)     <-------- -----DAG2                     <---------ANAC46          --------->TOE2(3)<---------GLK1(1) <-------- ------DOF2                    <---------ANAC58          <----------DOF2<------ZmHOX2a(1)   --------- ----GT1                       <---------ANAC58  <-----------GT1  <----------DOF2       ------------>CBF   tttttattacttggatgttttgtttagtagtttccgtgaataatggtatattttcgaaactttagtaactttgaggatctctttacaattttcaattatt  21039200                                                      --------->YAB1 -------->DOF2                                       <---------YAB1 ------AHL20(2)                                    --------->YAB1 -HAHB4                                          ------>ZmHOX2a(1) >ATHB1                                          <----------DOF2      <---------GLK1(1) --AHL20(2)                            <---------ARR14(2)             --------->GLK1(1)         ----- ->ATHB51           <-----------GT1   <----------TaMYB80        --------->ICU4                  ===== ->AHL20(2)------>MYB46(1)            <---------CCA1(2)   --------->DAG2           *TSS        ------ -ATHB12   ------>MYB83       ---------->DOF2   --------->TOE2(3)<---------ICU4 <---------ARR11(3) -- -ATHB51 <---------MYB59 --------->ZAT2--------->ARR14(2)---------->DOF2   --------->LBD16    ------- >ICU4<-----------GT1    --------->At4g35610<---------ALFIN1  --------->YAB1    --------->GLK1(2) <--   taaaagtgtaaccaaatttttaaaaccagctaaaaagctcatatccccatcctttataataaagtcataatgaattccccataatcttttgcattcccca  21039300        ------>ZmHOX2a(1)      ----------->RAV1(2)  <---------ALFIN1 ------>RAV1(1)                                     ------>ZmHOX2a(2)                             --- =================RAV                              <------ZmHOX2a(2)                 --------->At4g35610 --->ANAC46                                       <---------AGP1                   <-----------RAV1(2) ----->GAMYB                                      <---------ARR11(3)               --------->MYB46(3) -->LBD16 <---------CCA1(2)                   ---------->DOF2  <----------DOF2    <---------At4g35610 -------ALFIN1  <----------DOF2  <---------ALFIN1 --------->ARR11(3)             ----------->RAV1(1)   acacacactcctgtctctctttctatctctctcttccacttcaaacttcaaagatctcacaacttctttgagttttgtaatggcaacagatgaaatgaaa  21039400                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                                ----------->HVH21                                                                <---------ETT(1)                                                              ------>ZmHOX2a(1)                                                        ------>MYB46(1)                 -------------                                                        XXXXXXXXXXXXXXXXXXXXX>MIR472    <------------                                                    <---------ARR11(3)                 <-------------                                                    --------->ARR11(3)            <---------ALFIN1 --                      --------->ANAC58              --------->ARR14(3)   <---------ALFIN1------>ZmHOX2a(1)                      --------->ANAC46              <---------ARR14(3) --------->SPL7  <-------------           --------->MYB52(1)        --------->ANAC46   ------>MYB83--------->AtMYB61  -------------- ------>YAB1          --------->ANAC58     <---------ATHB12------>ZmHOX2a(1)<---------ALFIN1     <---   tcagaaactaaaaaaacagaacataagcaaaaacaatctacacaaatcaaacaagaccttcctcctccgaccataccacctcttccacttccttacaagg  21039500 -->AGL15                                                     <---------AHL20(2) ---AGL15                                                  <---------AHL20(2) ----AGL1                    --------->YAB1                <---------AHL20(1) --------->GT1         --------->ANAC46                  <---------AHL20(2) ----AG               ------->TEIL                   --------->ANAC55(2) --->AGL1          --------->AtLEC2                <-----------GT1 -----P        <-----------HVH21            <---------ALFIN1<---------YAB1           ---------->DOF2   taagttatttagttccccttcatgcacataactataacatagtttcccacattttacatattatttttttcttatactcttcgactcaaaagttttgagt  21039600                                                                                                   <-                                                                                                   --                                                                   ----------->GT1                <--                                ---------->DOF2             ---------->DOF2    <---------ICU4 -------                          ------->TEIL                   <------NtERF2    --------->AHL20(2)  <------                       --------->AtLEC2      <---------At5g28300 ---------->DOF2   -------->P <------   tttttttttgtttgtactcgtagtcatgcaccttgaaagtttctattcactgcgaaggctgcaaaagaaaagtcaaaaaaatacttaccagcattgaagg  21039700          --------->AHL20(2)     --------->TOE2(3) --------ANAC55(2)                                                         <-------GAMYB ------->ANAC55(2)                    ----------->GT1                     <---------MYB46(3) -----TEIL<---------AHL20(2)        <---------YAB1                       <---------TOE2(3) -------->AtSPL8               ----------->GT1                           ---------->ID1        <----- ---------AtSPL8          <---------AHL20(2)                   <---------MYB52(1)              ------ ---TOE1(3)             <---------AHL20(2)              --------->ICU4 <---------ANAC46   ---------->DOF2   tacataacataaaaaaattcacttatatttttttggttataagtaaaaatgttttgccataattcgttttgttttgtggttataggtgtttttaaagtgg  21039800  Previous    Next  AGI:  At1g56210.1    Description:  copper chaperone (CCH)-related. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G27690.1); similar to hypothetical protein OsJ_016387 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32904.1); similar to hypothetical protein OsI_017809 [Oryza sativa (indica cultivar-group)] (GB:EAY96576.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAV32198.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 21039283    to: 21040876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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