Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------At4g35610      --------->At4g35610      --------->LBD16    <------NtERF2   ------>NtERF2   <---------ATERF1(1)  --------->ARR14(2)  <---------ARR14(2)  <---------DEAR3(1) <---------ABI4(2) <---------ZAT2 --------->RAP2.3(1) --------->ATERF1(1) <------NtERF2 --------->At4g35610 <---------At4g35610 ---------ERF1 ----->NtERF2 ---------ORA47(2) ---------DEAR3(2) ---------RAP2.3(1)                                                <---------ARR11(3)   ------>NtERF2 ---------ATERF1(1)                                                --------->ARR11(3)  >>>>>>>>>AtERF-3 ---------RRTF1(1)                               <---------ARR11(3)<---------ARR14(3)  >>>>>>>>>AtERF-4 --------RAP2.6(2)                             --------->DOF5.7(2) <---------ARR14(2)--------->ZAT2 --------ANAC58                                <---------MYB52(1)  --------->ARR14(3)<---------ZAT2 --------RAP2.3(2)                            <-------GAMYB        --------->ARR14(2)<---------At4g35610 --------ANAC58                             <------NtERF2 ------->PIF5            --------->LBD16 --------ATERF1(2)                         ------>NtERF2  <-------PIF5        --------->ANAC58 --------DEAR3(1)                         --------->DEAR3(1)      --------->RVE1(1)  --------->At4g35610 --------RAP2.3(3)                     <---------ANAC58  --------->ANAC46     --------->DEAR3(1) --------ANAC46                     <----------DOF2      --------->ANAC58     --------->ANAC58 --------DREB2C(2)                 <---------ANAC58      --------->ANAC58  <---------WRKY38(1) --------RRTF1(3)    <---------At4g35610  <---------DEAR3(1)  ------>ZmHOX2a(1)------->GAMYB --------RRTF1(2)    ------>NtERF2 <---------ANAC58      --------->bZIP60(2)  --------->ANAC46 <----- ------>RAP2.6(3)   --------->DEAR3(1) <---------ANAC58<---------ALFIN1    <---------WRKY12   <------   ggcggctccgctgcatagttcgccgcttatgttccatgctttcgtcgccgttatcttccacgtcctgaatatcttgttcaacgcccgagctgccaaatca  21017300                                                                            <---------ICU4                                                                        <---------YAB1                                                                      --------->YAB1                                                                      <---------ICU4                                                                     <---------YAB1                                                                     --------->ICU4                        ----------->GT1                         --------->ANAC46     <----------DOF2                       ----------->GT1                      --------->YAB1 <---------YAB1    <---------DAG2   ---------->DOF2                        <---------AHL20(2)   <---------CCA1(2) ----ICU4          --------->YAB1                       <---------RVE1(1)<---------ICU4 ---ATHB12    --------->AHL20(2) <---------AHL20(2)    <---------MYB52(1)--------->YAB1            <-   tttccaatttttcaaaaaaaatcaaaagttaaaatttaaactcaaaaaaaaaaacccgatatttataagtcatcatcatcatcgtctctttcgaactata  21017400                                                                                                  <--                                                                                                <----                                                                --------->ANAC58           <---------                                                                --------->ANAC58           <---------                                                          ------>ZmHOX2a(2)            --------->TOE2(2)                                     ---------->DOF2--------->YAB1                     --------->TOE1(2)                                <---------------AGL15   --------->ARR11(3)            <---------HSFB2a(1)                           ----------->GT1      <---------MYB46(3)                    --------->HSFB2a(1)                         ---------->DOF2 ---------->DOF2<---------ARR11(3)            --------->HSFC1(2) -----ZmHOX2a(1)      ------------------------>ANAC81 <---------YAB1                  <---------HSFC1(2)   aggagttttttttttttttttgaaaatgaaagtaacaaaaaaagaaagggtcgatgatgatctaaaacgaaattagcaagtttggagaaccttcgtcagg  21017500                      <---------ANAC46                   <---------ARR14(2)                 <------MYB83            --------->MYB55(2)                                                                      <     <---------ZAT6--------->ARR14(2)                                                              <- ----ZmHOX2a(2)  <------MYB46(1)            <-----------GT1           -------->P                   -- --ZmHOX2a(1)   --------->MYB59  <---------ALFIN1                 ------>MYB83              <-------- --HVH21    <---------MYB46(3)  --------->MYB46(3)                ------>MYB46(1)           --------- --TGA1    --------->ALFIN1 ------>ZmHOX2a(2)                   <---------MYB59     <---------AHL20(2)   atcagtagtggcagtggttcggttctgtgatcgaaccacatgaaataaaccagacatgaacacaaaccaaactaccaaggagagaattaatctcagcatc  21017600      --------->AtMYB61                        <---------MYB52(2)   ------>NtERF2                              ------>MYB46(1)                  <---------AHL20(2)  --------->DEAR3(1)                          -------->P                       --------->AHL20(2)  --------->MYB46(3)               --------->LBD16                           *TSS ---------ATERF1(1)              ------>ZmHOX2a(2)                         --------->AHL20(2) --------DEAR3(1)               <------ZmHOX2a(2)     --------->ICU4   <---------ANAC46 ------->DEAR3(1)              --------->ARR14(2)--------->ANAC58      <---------ANAC58        ------ -At4g35610              <------NtERF2        ------>MYB83             <---------ANAC58    <---------AHL20(2) >At4g35610 --------->CCA1(2)  <---------ARR14(2)--------->ANAC58    <---------ANAC46 ------->TEIL   gtcgacgaccaaagatgtgagagagtcgggagggatccagagtaaaccaactagccatttttgttcttgttatgcgtataaataaatgtatattatatgg  21017700                                                       --------->ALFIN1                                                      <-------MYC3                                                      ------->MYC3                                                     --------->TGA1a                                                     <---------TGA1a                            ===========================================================MADS_MADS                            <---------DAG2           --------->O2                            ===================================bZIP_DOF                            <----------DOF2          <---------O2                            --------------->AGL15    <---------PIF3(3)                            <---------------AGL15    ===============MYC_MYB                         <---------AHL20(2)          ======================bZIP_DOF                         <-----------GT1          <------NtERF2                 ==============================================MYC_MYB       <---------AHL20(2)                 ------->GAMYB                  <---------ETT(2)       <---------------AGL15              <-----------GT1                   --------->ETT(2)       ------>ZmHOX2a(1) --------->AHL20(2)    --------->TOE2(3) <---------ICU4         <-----------RAV1(1)    <-----------GT1      <---------AHL20(2)    <----------DOF2 <---------MYB59        <---------ICU4  <--------P  --------------->AGL15     ---- <-----------GT1--------->MYB46(3)        <---------AHL20(2)    <---------DAG2          <---------ATHB12 ----->GT1  --------->AHL20(2)     <---------YAB1------>NtERF2  <----------DOF2         --------->AHL20(2)   ttttaactttagaatttaacagcctaattacttttttttgataaataatgtcgccatgtgggtaagctttttcctgtatttagttatccaataaatgaat  21017800                                                                    <---------ZAT6                                                                   <---------YAB1                                                                <---------YAB1                                                               --------->TOE2(3)                    --------->ANAC58                          --------->YAB1                    --------->ANAC58                          <---------ICU4                   <---------GLK1(1)          <---------MYB52(1)--------->ICU4                   --------->GLK1(1)  --------->TOE2(3)       --------->ATHB12        --------->ANAC55(2)                  ---------->DOF2    --------->YAB1          --------->ICU4           <---------ANAC55(2)               --------->ETT(1)      <--------HAHB4          <---------ATHB12         <------MYB46(1)            --------->ALFIN1         --------->ATHB12        <---------YAB1           <------MYB83          --------->ALFIN1           <---------ICU4        --------->WOX13(1)        --------->MYB46(2)       --------->DAG2               <---------YAB1   <---------ANAC58                --------->MYB59      ---------->DOF2    ----------->HVH21  <---------MYB46(3)<--------HAHB4    --------->AHL20(2) ----->AHL20(2)<---------ANAC46<---------MYB52(1)    <---------ANAC58          <---------ATHB12 <----   aaaacaaaaaaagtgtgtcggaaagccctggccgttttatcattagtcgttgtttacttgttaatcattagtattaaactaatgaattaggtgatcaagt  21017900                                          ----------->GT1                                         --------->LBD16                                       <---------LBD16                                     --------->ARR14(2)                                     --------->TCP16(1)                                          ----                                     <---------ARR14(2)                                          <---                                     --------->TCP20                                    --------->bZIP60(1)                                <------MYB83                                            --------->TGA2(1)                                <------MYB46(1)                                         <---------bZIP60(1)                                <---------ANAC46                          ----------->HVH21      <---                               --------->MYB111(1)                     --------->ARR14(2) --------->At4g35610                        --------->At4g35610                            <---------ARR14(2) <---------At4g35610      --------->LBD16   <---------At4g35610                <---------AHL20(2)           <---------TGA2(1) -----ZAT6      --------->YAB1 <---------AtMYB61          <---------WOX13(1)       --------->WOX13(1)   gttatttccgaatttcaattttaaactgctgatttggtggaaccgggttaaatagagttgattaatcgaaccgtatatgacatatcaatgacatcagcca  21018000                                                                     <-------TEIL                              <---------CCA1(2)                     --------->CCA1(2)                          <---------ANAC55(2)            --------->ARR14(2)                          <---------ANAC58               <---------ARR14(2)                          --------->ANAC55(2)          <---------AHL20(1)                          <---------ANAC55(1)          --------->ARR11(3)                          <---------ANAC58             --------->AHL20(1)                          <---------ANAC46             <---------ARR11(3)<-------TEIL ----->At4g35610         <-------TEIL        <----------DOF2   ---------->DOF2 --------->At4g35610 ------At4g35610       --------->TOE2(2)  <---------ALFIN1  --------->ANAC46   <---------At4g35610 ----GAMYB           <-------TEIL <----------DOF2   --------->AHL20(2) --------->TOE2(2)          ---   gttgtctcattttgaaaccaaaatacatacgtgtttcttttcttccactttgtataaaatattcgcaaagatacatacgtctgatgcaatccaattgcta  21018100                                           <-----------HVH21                                          --------->ANAC58                                          --------->ANAC58                                          <                                        <------ZmHOX2a(1)         <---------WRKY18(1)               <                                      --------->ANAC58            <-----------GT1            <-------                            --------->ATHB12         ----------->GT1                        <--------                           --------->ICU4 <---------bZIP60(1)    ----------->HVH21          <-------GAMYB     --------->MYB46(3)    <---------YAB1 ----------->GT1        --------->WRKY38(1)  <---------ANAC58 ------>ZAT6          <---------ZAT6  --------->ANAC58 --------->AHL20(2)             <---------ANAC58   atactaaacgaccatttcgcgatagagttatgattcggacaaggacgtcaaatacaagttaataggtttgaccatgttttaaaaacattcttgccgttac  21018200  Previous    Next  AGI:  At1g56145.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56130.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56120.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46795.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43419.1); contains Int Range:  from: 21011758    to: 21017677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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