Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------ICU4                                               --------->ATHB51                                               <--------HAHB4 ------>LBD16                                  --------->YAB1 --->NtERF2                                    -------->ATHB1 ----->RAP2.6(2)                              <---------ATHB51 ----ZAT2                                     <---------ATHB12 --->ZAT2                                     --------->ICU4 -->ANAC58                                  --------->WOX13(1) -->ANAC46                        <-----------GT1--------->ICU4            <-----------GT1 -->ANAC58              <----------DOF2 ------->GAMYB                     --------->AHL20(2) ->DOF2      ---------->DOF2  <---------AHL20(2) <---------YAB1       <---------YAB1   cgcgaaaattgagttcaaagctagcgctgtttttatttacaacagtcaattattattagctcttaacaaaatacgattaactaaacaaaaaatgtcaatt  21011100                                          <---------YAB1                                    --------->AHL20(1)                                    <---------AHL20(1)                                 --------->AHL20(2)                                                 <                                 <---------AHL20(2)                                             -----                              --------->AHL20(2)                            --------->At4g35610------                             --------->AHL20(2)                           <-----------RAV1(2)  ------                      <------ZmHOX2a(1) --------->YAB1                   <------ZmHOX2a(2)   <-------                    <---------TOE2(2)  <---------YAB1                  <------ZmHOX2a(1)   --------->ARR11(3)                    <---------TOE2(3) --------->AHL20(1)             --------->MYB59 <---------ANAC58                    <---------TOE1(2) --------->AHL20(2)            --------->YAB1   <---------ANAC58        ----------->GT1  --------->AHL20(2)                      --------->WOX13(1) --------->At4g35610   gaaactaaaccggtaaacttcttaggataaaataaaaaaatattataaatgtaaacatcggttttatcaattaggatcagaagagtagcttaagacctag  21011200                                                                                           ------>ZmHOX2a(1)                                                                                      <------NtERF2                                                                                      --------->ATERF1(1)                                                                                     <---------ATERF1(1)                                                                                     <---------MYB46(3)                                                                                  <---------MYB46(3)                                                                                 <---------AtMYB61                                                                                 --------->ALFIN1 ---------ALFIN1                                                               <-----------RAV1(1) ---->STY1(2)                                                                  --------->ALFIN1 >MYB83                                                         --------->ARR11(3)<---------ANAC46 >MYB46(1)         --------->ATHB12                   >>>>>>>>>TBF1       <------NtERF2<---------PCF2 --MYB59         <------ZmHOX2a(2)             ---------->DOF2  <---------ARR11(3)<---------bZIP60(2)   ctacacagtcttcaatccgatcgattgaatttgaacttgtcaagttgttcaaagaagaagaagacagaccttcgtcgggatgtgtggtggctcctgttcg  21011300                          ----------->GT1                 ---------->DOF2              --------->ANAC58              --------->ANAC55(2)              --------->ANAC58              <---------ANAC55(2)              --------->ANAC46                                                ----------->RAV1(2)              --------->ANAC55(1)                                   <---------At5g28300           --------->MYB46(3)         --------->ANAC58            --------->ARR14(2)    --------->At4g35610   <---------MYB59                         <---------ARR14(2)    <---------At4g35610 --------->SPL7--------->ANAC58<------ZmHOX2a(1)------>NtERF2   attttgagctcgaaccacgtaaaccggaccgaaattacacaagaaccagacagtgaggagtagacacagataccgccatagcctgagcatcgtcggaaac  21011400                            <------NtERF2                           <---------RAP2.6(3)                           ------>NtERF2                           --------->LBD16                          >>>>>>>>>AtERF-5                          >>>>>>>>>AtERF-4                          >>>>>>>>>AtERF-1                          >>>>>>>>>AtERF-2                          >>>>>>>>>AtERF-3                          --------->ATERF1(2)                          --------->RAP2.3(3)                          --------->RAP2.3(2)                          --------->RAP2.6(2)                          <---------ATERF1(2)                          --------->DEAR3(1)             <------MYB83                   <---------YAB1                        <------MYB46(1)    <-----------RAV1(1)  <---     --------->MYB52(1)   --------->ANAC46              --------->MYB59    <---------TOE2(3) --------   --------->AHL20(2)    --------->RAP2.3(1)       <---------AHL20(2)     *TSS      <----------DOF2   <---------AHL20(2)    --------->ERF1       ----------->GT1         <---------ANAC46       <-------   taaaattaaacggagaagaagatgatagccgccaaaactagacggagaaggttttaatttggttcaaaaatggtgtttatgttggactttgaagagatac  21011500                                                                                        --------->ZAT18                                                                                        <---------ZAT18                                                              --------->ANAC58         --------->ALFIN1                                                 --------->ZAT14                     <---------bZIP60(2)                                                 <---------ZAT14                     <---------ANAC46                                                 <---------ZAT2                    --------->ZAT14                                                 --------->ZAT2     <-------TEIL   <---------ZAT14                                               <------NtERF2  --------->ANAC58     --------->REM1(2)                                     ------->GAMYB            --------->ANAC55(2) ----------->HVH21        <---------ANAC58            --------->MYB46(3) <---------ANAC58      --------->ANAC58        <---------ANAC58 <---------AHL20(2)   --------->LBD16 <---------ANAC55(2)--------->LBD16       ---------->ID1<---------AHL20(2)      --------->ANAC46 --------->ANAC46  <---------ANAC46 -------DOF2         --------->AHL20(2)     <---------LBD16----------->HVH21 --------->ANAC46 ->ARR11(3)         --------->AHL20(2) ------>MYB46(1) <---------ANAC58      --------->ANAC58 --ARR11(3)         <---------AHL20(2) ------>MYB83  --------->ALFIN1 ------->TEIL<---------MYB52(1)   ttttcatttggcttaatttgaatttaattaatggtctaaccaactacgcggagcagtgcgtctcacgcgatgcatccacaagccgtgaagtggacgcgct  21011600                                                   ------>NtERF2                                                <---------At4g35610                                                <---------ZAT2                                                --------->ZAT2                                               <---------ATERF1(1)                                               <---------MYB46(3)                                              <---------DEAR3(1)                                             <---------ZAT2                                             --------->At4g35610                                             <---------At4g35610                                             <-------GAMYB                                             --------->ATERF1(1)                                             <------NtERF2                                            ------>NtERF2                                            <---------ATERF1(1)                                            <---------MYB46(3)                                            <---------ERF1                                            <---------RAP2.3(1)                                            <---------RRTF1(1)                                           <---------ANAC46                                           <---------ANAC58                                           <---------RAP2.6(2)                     <---------WRKY12      <---------RRTF1(2)                     <---------WRKY38(1)   <---------RRTF1(3)                   <-----------HVH21       <---------RAP2.3(3)                <-------GAMYB              <---------RAP2.3(2)               <---------ANAC46            <---------DREB2C(2)              ------>NtERF2                <---------DEAR3(1)           <---------At4g35610             --------->ATERF1(2)           --------->At4g35610             <---------ANAC58       --------->GLK1(2)                   <---------ATERF1(2)       <---------ARR14(2)          <<<<<<<<<<<<<<<<<LFY                    <---------ALFIN1       --------->ARR14(2)      --------->GLK1(1)--------->At4g35610  --------->YAB1   <----------DOF2      <---------GLK1(2)  ------->GAMYB    --------->RAP2.6(3)--------->ZAT18  <---------DAG2   taaaccgagattccgctgcgttgtcaacgggagatttcaacaatggcggctgctgcctacgagtgcaagaagcatcaccacctttggactttgatactaa  21011700                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                         <---------------AGL15                                      <---------PCF2                    ----------------->AGL3               <---------TOE2(3)     <----------ID1   <-----------RAV1(2)--------------->AGL15           <----------DOF2 --------->TOE2(3)       <----------DOF2      <-----------------AG     --------->YAB1       ----------->GT1    --------->ANAC46           <-----------------AGL2     <---------ICU4      <---------TOE1(3)   --------->YAB1             =============================     <--------ATHB1      <---------TOE2(3) ------>MYB83  <------ZmHOX2a(1)         <---------WRKY38(1)    <---------ATHB12  --------->AHL20(2)   ------>MYB46(1)      ----------->GT1   --------->WRKY18(1)    --------->ICU4    <---------AHL20(2) <---------MYB59--------->LBD16 ----------------->AGL1  -----   atgccaatgatggttttaagggattttaatgttaaaaatgggaccaaacacaactttcaggagaaacagtcaaatccaattttggtcaaacgaatatgta  21011800              --------->MYB46(3)             ------>MYB83             ------>MYB46(1)            --------->ANAC46                                  ----------->GT1 ======================================================================MADS_MADS               <----- -->TEIL<-----------GT1             <----------DOF2    --------------->AGL15                   ------   tatgtgttatttaccaacaacgatttctatattgacttctttttttttatgtaagaacaaaaaatagaaaaaccacaagttttcaagtttcaatgtcgtc  21011900                                                       --------->At4g35610                                                       <---------At4g35610                                                       <---------ZAT2                                                       --------->ZAT2                                            --------->ANAC58                                            --------->ANAC46       --------->WRKY12                               <----------DOF2    --------->ARR11(3)              <---------At4g35610                            <---------ARR11(3)    <---------ARR14(2)        --------->YAB1                            --------->ARR11(3)    <---------ARR11(3)   --------->MYB46(3)                            --------->GLK1(2)     --------->ARR14(2) <-----------GT1 -NtERF2                   <---------GLK1(2)--------->ANAC58     <-------GAMYB   ------->TEIL --->ATERF1(1)     <---------ANAC46       <-----------RAV1(2)<---------ZAT2<---------ATHB12   gtccatgttcttcaacttgggacttggaagaatcttttggagtttcaggcaatatccagctcgagctcgttgaaccactcatgaagctcattgcattctc  21012000  Previous    Next  AGI:  At1g56140.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56130.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56145.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46795.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43419.1); contains Int Range:  from: 21005239    to: 21011474    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g56145.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56130.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56120.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G56140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46795.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43419.1); contains Int Range:  from: 21011758    to: 21017677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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