Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <-----------GT1            ----------->HVH21                      --------->AHL20(2) --------HSFC1(2)                         ------>ZmHOX2a(1) ------->HSFC1(2)                     --------->ARR14(2) ------->HSFB2a(1)   <------ZmHOX2a(2)<---------ARR14(2)                    <----------DOF2 --------HSFB2a(1)   ============================HOX2a_HOX2a--------->At4g35610 ----------------------TaNAC69(2)     <---------ARR11(3)--------->MYB52(1)--------------->AGL15  <--- --ZmHOX2a(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)--------->LBD16             <---------------AGL15  <---   aagcgtcgaaagatgagacagcgatccaagtagactccaagttcctcccccaaataactatcggctctctgtgattctctttttagttttgtcttgaaac  20967000                                   <---------HSFB2a(2)                        <---------AHL20(2)          --------->HSFB2a(2)   <---------YAB1               ------->TEIL          <---------HSFB2a(2)<---------YAB1       --------->GLK1(2)   <----------DOF2     <---------AHL20(2)       <---------KAN4(1) ------DAG2        <----------DOF2 <---------YAB1--------->KAN4(2)                   <---------CCA1(2) -------DOF2      --------->TOE2(3)<---------TOE2(3)      <---------ANAC46      <---------ZAT18   tttttctttcttctagcaaaccttttttattttgattatggaagttttgaacattctgtgatgtatgtaaaacttgctcttgtgctcttatctatctaat  20967100               <---------ATHB12      <----------DOF2      ------>ZmHOX2a(1)     --------->TOE2(3)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <---------GLK1(2)  --------->AGP1   <-----------RAV1(1)                                --------->YAB1  --------->ARR11(3)                                                 <---------ATHB12              <-  <---------ARR11(3)                                                 --------->ICU4       <---------YAB1  <---------ARR14(2)                   <---------ANAC58     --------->ANAC58            --------->YAB1  --------->ARR14(2)--------->ZAT14    <---------ANAC58     --------->ANAC58           <---------YAB1   cacagatcctttatctaatcactgttgtcaaaatgtgtgaagcttgtttttgtctaattgtcaagacagcaataatcttatgaagaagtattatgagtat  20967200                                                                                          -----------                                                                                          --------->ICU4           --------->At4g35610                                     ----------->GT1  --------->HSFB2a(2)      <---------ICU4                                           --------->ATHB12     <---------HSFC1(1)     <---------ATHB51                                          -------->HAHB4       <---------HSFB2a(2)     --------->ICU4                                            <---------ICU4    --------->GLK1(2)     <---------AHL20(2)                             --------->ANAC58            --------->ARR14(2)     --------->AHL20(2)                     --------->YAB1    <---------YAB1    <---------ARR14(2) --------->AHL20(2)                     --------->AHL20(2)    --------->ICU4    <---------GLK1(2)  <- --------TOE2(3) <---------At4g35610--------->ICU4  --------->ANAC58          ----------->ARR10    <-   taagaaaataattagcttaagctaatgaaacagttgtcaaaatgaattataaacaagaaccaaaatgattagtttaaactcagattctcgaaatgtttat  20967300                                                          <---------ALFIN1                             <---------ANAC55(2)       --------->YAB1                   ----------->GT1                    --------->MYB46(3)              <---------ANAC55(2)                     <---------ATHB12              <---------ANAC55(1)  ----------->GT1   ------>MYB46(1)                   <---------YAB1              --------->ANAC55(2)<------------CBF    ------>MYB83                     <---------ARR11(3)              <---------ANAC46  --------->ATHB12    --------->WOX13(1)                --------->ARR11(3) >GT1----------->GT1  <---------AHL20(2)          ------------>CBF                  *TSS        ----- --------YAB1<-------TEIL--------->YAB1     ---------->DOF2  <---------GLK1(2)      ----------->GT1 --------TOE2(3) ------->TEIL--------->ANAC55(2)<------ZmHOX2a(1)                 ---------->DOF2   taacatagggcaaaatacgtatattaaaaataagtgattgtgaaaacaaaggaccaatcaacacattctctgtaatttgcgataaaaagataatagacaa  20967400                                                                                               <-----                                                                                              <------                                                                                     --------->ANAC58                                                                                  <---------REM1(2)                                                                                 <-----------TGA1                                                                                 <-----------HVH21                                                                                <---------ANAC58                                                                                --------->bZIP60(1)                                                                   <---------ANAC46  --------->ANAC58                                                                  <---------ZAT2--------->TGA2(1)                                                                  --------->ZAT2<---------TGA2(1)                            <---------ZAT2                     <---------At4g35610----------->HVH21   <----------ID1           --------->At4g35610           <---------ANAC46      <---------bZIP60(1) --------->CCA1(2)          --------->ZAT2                <---------ANAC58      <---------ANAC58    < ----->DOF2                 <---------At4g35610           <---------ANAC58   --------->ALFIN1 <------   aagagacgacgaacacacttagaaattttgagctgagaggctgagaaaattagcaccatggcgagagcagcttgtagcagtgtcgtcacggctatggctt  20967500                                                                                               ------                                            ----------->GT1                              <---------DAG2                                            --------->LBD16                              <----------DOF2 -----DOF2                                <---------LBD16                    --------->HSFB2a(2) ---ANAC58                         --------->ICU4            <---------DEAR3(1)         <---------ANAC58 -----------GT1                    <---------YAB1        <-------TEIL <-----------GT1   <---------ANAC58 ---ANAC58                    ----------->GT1<---------MYB52(1)<------NtERF2 <---------HSFB2a(2)  ---   tgttaccctctaagtctcttctctgtagaaaccagttattattctccggtaattccaagttcgtcggagttttgactctccagaagcgatgcttttcctc  20967600                                                ---------->DOF2                                          =================bZIP_DOF                                          --------->O2                                          =================bZIP_DOF                   <---------ZAT2         --------->TGA1a              <------NtERF2      --------->YAB1                      <---------O2                ------>NtERF2     --------->ICU4<---------At4g35610    <---------TGA1a             <-----------HVH21         <----    --------->ANAC58                    --------->MYB52(1)           --------->DEAR3(1)         <----    --------->ANAC58                   ------>ZmHOX2a(1)          --------->ANAC46             ------ >ZmHOX2a(1)    ---------->DOF2<---------DEAR3(2)          <----------DOF2 --------->SPL7 ------->TEIL ------->DOF2   ====================================bZIP_DOF    <-----------GT1         <---------ZAT18   caaagtaagcatgagtttgaaagctggtatcgtcggtcttcctaacgtcggaaagtctactctttttaacgccgtcgtaagtcccattgatgcacttgtc  20967700      <-----------GT1                                     <---------TOE1(2)    <----------DOF2                             <---------YAB1                                  <----  <------------------------ANAC81             --------->ANAC55(2)                           <-------- -----ANAC58                              <---------DAG2  <---------TOE2(2)      <---------At4g35610 -----ANAC58                           <---------ALFIN1  <-----------RAV1(2)     <---------ZAT2<----- ---->ID1      <<<<<<<<<TBF1     --------->TOE2(3) <---------WOX13(1)    --------->DAG2    <---------   gttcttctttactcttcttcttctctgaggcatttcgtcaaacaccttatgtgattgtctcaggttgagaatggaaaggctcaagctgctaattttccct  20967800    --------->ATHB12                                                   <---------MYB46(3)   <---------YAB1                      <---------ARR14(2)        --------->TOE2(3)         ------>ZmHOX2a(1) ------DOF2                            --------->ARR14(2)    <---------------AGL15     <---------ARR14(2) ---GT1                  <-----------RAV1(1)             <----------DOF2               --------->ARR14(2) ----DAG2         --------->ALFIN1     <---------GLK1(2)<---------ANAC58          --------->MYB52(1) --GT1          <-----------RAV1(1)  ------>ZmHOX2a(1)  <---------ANAC58          ------------>MYB.PH3(1)   tttgtacgattgagcctaatgtgggtattgttgctgttcctgattcgcgtcttcaagtgctttctaaacttagtggttctcagaaaacggttcctgcttc  20967900  Previous    Next  AGI:  At1g56045.1    Description:  ribosomal protein L41 family protein. contains InterPro domain Ribosomal protein L41; (InterPro:IPR007836) Range:  from: 20966289    to: 20967129    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g56050.1    Description:  GTP-binding protein-related. similar to GTP binding [Arabidopsis thaliana] (TAIR:AT1G30580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23829.1); contains InterPro domain Protein of unknown function DUF933 (InterPro:IPR013029); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Conserved hypothetical protein CHP00092; (InterPro:IPR004396); contains InterPro domain Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); contains InterPro domain TGS-like (InterPro:IPR012676); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) Range:  from: 20967384    to: 20970006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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