Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ICU4                                                               --------->YAB1                                                               -------->ATHB1                                                              <---------ATHB12                                                   --------->ARR11(3)                                   --------->HSFB2a(2)      --------->WOX13(1)   <---------ZAT14                                   <---------HSFB2a(2)    ------>ZmHOX2a(1) --------->LBD16                                  =====================HOX2a_HOX2a          <---------RAP2.6(3)                                  ===============================HOX2a_HOX2a------>NtERF2     <---------ARR11(3)           ------>ZmHOX2a(2)<---------ARR11(3)      --------->ANAC46         -     --------->ARR11(3)       <---------ATHB12    --------->GLK1(1)        --------->RAP2.6(2)------>ZmHOX2a(1) ---------->DOF2         ================HOX2a_HOX2a     --------->TOE2(3)<---------LBD16   ------>ZmHOX2a(2) ----NtERF2              ------>ZmHOX2a(1)        <---------GLK1(1)  <-----------RAV1(1)  --------->ARR11(3) >SPL14         --------------->AtSPL8          <------ZmHOX2a(1)<---------YAB1  --------->ZAT14    <   gtcaaaagttcttaaatcgaagtactcctcaaatgatcgagaagacttgaggagttcttcctcaatcattcttgttgccgcaatacactgttgatcctgc  20941600                 <---------ANAC58             --------->At4g35610                 --------->ANAC55(2)          <---------At4g35610                 <---------ANAC55(1)    <-------GAMYB                 <---------ANAC46      <---------MYB46(3)                 <---------ANAC55(2)   <-----------RAV1(1)                 <---------AtLEC2    <---------At4g35610                       <---------At4g35610                 <---------ANAC58    <---------ZAT2                         <---------At4g35610  <---                 <---------bZIP60(2) --------->At4g35610      <---------HSFC1(1)      <---------ANAC58             <-------MYC2        --------->ANAC46             --------->HSFC1(1)      <---------ANAC58             ------->MYC3        --------->ANAC58             --------->HSFB2a(2)   <---------YAB1             ------->MYC2        --------->ANAC58     <---------YAB1  --------->CCA1(2)       <------             <-------MYC3      <---------ALFIN1   <---------GLK1(2)  --------->ARR11(1)      <------- -------->HSFB2a(2)   <---------bZIP60(1)   <---------RAP2.6(2)      <---------ARR11(3)      <------- ---------HSFB2a(2)   --------->bZIP60(1)  <---------At4g35610<---------HSFB2a(2) <---------At4g35610   ttctctaagagagcacgttgcgtggcatcatcaacacgctgctgttgctgctgattcttcttgtctagaaagatttgatgctgcttctgcttgtgtctta  20941700                                                          <---------YAB1                                                       <------ZmHOX2a(2)      --------->MYB52(1)                              <---------ARR11(3)      --------->ARR14(2)         <---------YAB1       --------->ARR11(3)               --------->YAB1      <---------ARR14(2)       >>>>>>>>>GT-1      --------->CCA1(2)                    ---------->DOF2   --------->YAB1            <-------GAMYB      --------->YAB1                        --------->ICU4 ------YAB1                 <---------MYB46(3)<---------TOE2(3)                   --------->ZAT18 ---SPL7                    ----------->GT1  ---------->DOF2                  <---------ICU4 --ANAC58                  <---------YAB1   <---------AHL20(2)             --------->YAB1 --ANAC58               <---------YAB1      --------->AHL20(2)  ----------->RAV1(1)   <---------ATHB12   cgatagcataactggagaaagaatatatgatggttaatatagcaaattaaagataagatcatgagacaacatatgtataataagggcaataaagagagag  20941800                                                                   <---------ZAT2                                                                   --------->ZAT2                                                                   ----------->RAV1(2)                                                                   --------->At4g35610                                                                   <---------At4g35610           <---                                                          <-----------GT1                       -----                                                       -------->ATHB1                          ------                                                       --------->ATHB51                       -------                                                       <---------ICU4                         -------                                      <---------CCA1(2)--------->ATHB12                       <------NtERF2                                    <---------ANAC58  <---------ATHB51          --------->MYB52(1)            <-----------GT1         <---------ANAC58  <---------AHL20(2)  ----------->GT1     -------         <---------YAB1           --------->ALFIN1    --------->AHL20(2) <------ZmHOX2a(1)   ------>NtERF2   <---------YAB1          ---------->DOF2            --------->ICU4<----------CDC5      <-----------RAV1(1)   --------->ICU4       --------->TOE2(3)    <----------DOF2      ------>ZmHOX2a(1)   --------->ATHB12   cgaagatgattatgttacattctatttcttaaagcagtgcgtctcttctttatgaaattattagcatcctgctgaggagaaataacagttattggtgccg  20941900                                            <---------YAB1 ----------->TGA1              --------->ARR14(2) ---NtERF2                     <---------ARR14(2)--------->YAB1 ->NtERF2                     <------ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXMIR774B   --------->AtMYB61 --->DEAR3(1)         --------->GLK1(1)   --------->YAB1                  ----------->HVH21       --- -->DEAR3(2)          <---------GLK1(1)   <---------ICU4                 <-------MYC3     <---------ZAT2 -->ATERF1(1)      ------->GAMYB         <---------YAB1           ------->GAMYB---------->DOF2 ------ -->RAP2.3(1)   ----------->RAV1(1)  <----------DOF2   <<<<<<<<<<GT-3b   ------->MYC3   ------>ZmHOX2a(1)   acgatgacgaagaaacagcaacagagttctgaggaacttctttattattattcatatttttctttcaacagagcatgtgaccaaagcctcctagctcctc  20942000                                                                             ------------>CBF                                       --------->LBD16                      --------->ANAC58                                       ------>NtERF2                       <-------TEIL                                     --------->ATERF1(1)               <---------TOE2(3)                                     --------->DEAR4(2)                <---------TOE1(3)                                     <------NtERF2               --------->AHL20(2)    --------->AHL20(2)                                    <---------ATERF1(1)          --------->YAB1        <---------AHL20(2)                       <---------WOX13(1)                        <---------AHL20(2)   <---------WOX13(1)                      <------------CBF--------->DEAR3(1)      --------->WOX13(1)   <---------YAB1 --->ZmHOX2a(1)  --------->DAG2    <---------DEAR3(1)       ------------>CBF--------->ANAC58 >ZmHOX2a(1)    ---------->DOF2    --------->ARR14(2)  ---------->DOF2 <---------------AtSPL8 <------   ctatttttgacctgaagaaaaagtaattgattttagggctccgcctaagtcaaaaaacaaaggtcaattatataaggttcgcaatttgattaattagcgt  20942100                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                             --------->ZAT6                                                                            <---------ZAT18                                                  <------MYB83              --------->ZAT14     <----               <---------WRKY38(1)               <---------AtMYB61          --------->ZAT18    <-----               <---------WRKY12                <------ZmHOX2a(1)            <---------ZAT14    <-----               <---------WRKY45            ---------->DOF2             --------->ARR11(3)      <-----    ----------------->AGL3             <----------ID1                  <---------ARR11(3)   ---------  --------->ANAC58                 ---------->DOF2<------MYB46(1)    <---------YAB1--------->TOE1(2)  --------->ANAC58            <----------ID1 <---------TOE2(3)       <---------TOE2(3)      --------- ---ANAC46    --------->WRKY18(1) --------->AtMYB61--------->ARR11(3)----------->ARR10  <------------CBF   tgagaagccaaatacagtcaacgagaacgaagacgaccaaagaaacaaaggatggtcttggtcgatgagttaagatactacactacgtgcgattgtgacg  20942200                                                                                          <---------AHL20(2)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(2)                                                                   <----------DOF2   <---------AHL20(2)                                                                   <---------DAG2 --------->AHL20(2) -----LBD16                                                   --------->ANAC58    <---------AHL20(2) ----ANAC46                                                 ---------->DOF2      <---------AHL20(2) ----O2----------->HVH21<------ZmHOX2a(1)                  <---------ATHB12   --------->AHL20(2) ----bZIP60(2)       <------ZmHOX2a(1)      <---------CCA1(2) --------->ANAC58<---------AHL20(2) -->HVH21 --------->ANAC58             <----------DOF2   --------->WOX13(1)  <---------AHL20(2)    -- -->TGA1  --------->ANAC58           ---------->ID1    ------------>CBF  <---------AHL20(2) <--------   gggaactatgggacgcatgaagaggaggaatagggatttgtcttttatatccaaaaaatcaatcaagccctttattttatttatttatttatttagttga  20942300          --------->WOX13(1)                                 --------->ARR11(3)        <---------AHL20(2)            --------->ANAC55(2)    <---------ARR11(3)        --------->AHL20(2)            --------->ANAC46----------->GT1 ----------->GT1                     <---------LBD16---------->DOF2            <---------AHL20(2) -------->DOF2                       <---------------------WRI1    <---------YAB1 -At4g35610               <----------DOF2          <------ZmHOX2a(1)    ----------->GT1   caaaagttatataaatcaactagtttgacttttgtttttgacggaatcaactaggaaagttaagatgttatgttttgttatatttttaaaaaaacttcag  20942400                                                     --------->MYB52(2)                                                   <--------P                                                <---------TOE1(3)                                                <---------TOE2(3)                                             <---------YAB1                                           <---------ICU4                        --------->AHL20(2) -------->ATHB1                            <---------ANAC58             <---------AHL20(1)           <---------AHL20(2)                         <---------ANAC58             --------->ARR11(3)           --------->AHL20(2)                         <---------ANAC46             --------->AHL20(1)           <---------ATHB51                     <---------AHL20(2)          --------->AHL20(2)              --------->ICU4        <----------DOF2<---------YAB1   gcccaactacaaaaaaatattggaaaataaaaacaattgtggaaattattaaggttagtctctcttctttttttttttttttttattgtgtgtttagtat  20942500  Previous    Next  AGI:  At1g55970.1    Description:  ATHPCAT2/HAC4 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 4); histone acetyltransferase. Identical to Histone acetyltransferase HAC4 (HAC4) [Arabidopsis Thaliana] (GB:Q9LG11;GB:Q8LRK3;GB:Q8LRK4;GB:Q94EW2;GB:Q9SGS6); similar to HAC1 (P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2 GENE), H3/H4 histone acetyltransferase/ transcription cofactor [Arabidopsis thaliana] (TAIR:AT1G79000.1); similar to HAC12 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 12), H3/H4 histone acetyltransferase/ transcription cofactor [Arabidopsis thaliana] (TAIR:AT1G16710.1); similar to ATHPCAT4/HAC5 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5), H3/H4 histone acetyltran Range:  from: 20935794    to: 20941955    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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