Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ---------->DOF2                                          <---------ANAC46                             <---------YAB1                              <---------AHL20(2)                      <----------DOF2                                    --------->AHL20(1)                   --------->ARR11(3)                                    <---------AHL20(1)                   <---------ARR11(3)                                   <---------AHL20(2)                  <---------CCA1(2)                                     --------->AHL20(2)                 <---------AHL20(1)                                ------>ZmHOX2a(2)     <---------ANAC58            --------->AHL20(2)--------->YAB1                     <---------ARR11(3)      <---------ANAC58 --------->ANAC58<---------ARR11(3)                       <---------ZAT18--------->AHL20(2) --------->ANAC58--------->ARR11(3)                       --------->ETT(2)    <---------AHL20(2) --------->ANAC46--------->AHL20(1)            <-------TEIL      --------->ARR11(3)    <---------ANAC46   ctcaagccaacttataaaatatatctttcttatcaaaagaagtatcacatacatttattgtggacatgatctaattttattttttggtagtgcgtatgta  20876900                                                             ------->MYC3                                                             ------->PIF4                                                             <-------MYC3                                                             <-------MYC2                       -----                                                             ------->MYC2                       -----                                                             ------->MYC4                       -----                                                             ------->PIF5            <---------YAB1                                                             <-------PIF4           --------->AHL20(2)             --------->YAB1                     --------->AHL20(2)                  <---------AHL20(2)          --------->YAB1                       <---------AHL20(2)<----------DOF2   --------->YAB1          --------->WOX13(1)          --------->ATHB51       <-------PIF5          --------->AHL20(2)         --------->MYB46(3)           <---------ICU4   <------ZmHOX2a(1)           <---------AHL20(2)   ttggattatcaacaatcacattcgaaagaattagattccattatggcatattatttaggagcatgtgcttcaatttaggctctaattaaaattagtctac  20877000         <----------DOF2     <-----------GT1  <---------ICU4  --------->YAB1 <---------AHL20(2) --------->AHL20(2)                <---------YAB1             <---------YAB1 --------->ICU4             ---------->DOF2           <---------AHL20(1) <---------ATHB51       --------->ANAC58              --------->ARR11(3) ---->ANAC58            --------->AtLEC2    --------->HSFB2a(2)                                     < ---->ANAC46            --------->ANAC58    <---------HSFB2a(2)--------->YAB1      --------->ICU4  -- ---->ANAC58   --------->ATHB12    --------->ICU4  --------->AHL20(2)  ---------->DOF2  ---------->DOF2   gaaataattacctttagtgattaagcatgcaaaagtcatttttgttttggaaataatatatactattatacaaaaatgcgaagaaattagtaaagtttga  20877100                              <---------WRKY18(1)                            <---------WOX13(1)                           <---------AtLEC2                           <---------ANAC58                                  <---------ANAC55(2)                           <---------ANAC58                            <---------AHL20(2)                       <---------ANAC58                                --------->AHL20(1)           --------------->AGL15                             <---------AHL20(2)     ----------->GT1           <---------------AGL15                             <---------ICU4  <---------YAB1          <-----------------AGL3                            <---------ATHB12<-----------------AG          ====================================================================================MADS_MADS          ----------------->AGL3 <----------DOF2         ------>ZmHOX2a(1)  <-----------------AGL1        <---------ZAT6 <---------ANAC58             <---------GLK1(1)  --------->AHL20(2) ------ZmHOX2a(1)    --------->GLK1(2)              --------->GLK1(1) <---------AHL20(2) --------->GT1      <---------GLK1(2)         <---------ANAC46        --------->AHL20(2) ---------->DOF2   gaggaaaatagtgctaaaaatagattcttgcttgacttttcttcaatggtggagatttcctaataaatccaattaaattacgaaaatggtaaaaagaagc  20877200                                                                                  <---------CCA1(1)                                                                --------->ANAC58  <---------RVE1(1)                                                                --------->ANAC58 --------->ARR11(3)                                                   <---------AHL20(2)     <---------YAB1                                                   --------->AHL20(2)   <---------ICU4                                             ------------>CBF ---------->DOF2    <---------ARR11(3)                                    <---------ARR11(3)     --------->ANAC46     --------->YAB1                                    --------->ARR11(3)     --------->ANAC58    <---------YAB1                             --------->GLK1(1)     --------->AHL20(1)--------->YAB1                 ----------->GT1   <---------CCA1(2)       --------->ANAC58  --------->CCA1(2)      <         <---------YAB1      <---------GLK1(1)    --------->AHL20(2)*TSS--------->YAB1           <---   atgttcgaaatacgataatgtgtaaaatcggaaatctatatctctggttcaattttattacaaggaaagaaacatcatgatatgatatttttctcaagtc  20877300                                                                                <---------DAG2                                                                                <----------DOF2                                                                               <---------DAG2                                                                       --------->DAG2                                                                      ---------->DOF2<-----------GT1                                                         <---------ANAC46    ------->TEIL                                                         <---------ANAC58  --------->ZAT14        <---------HSFB2a(2)                              <---------ANAC58  --------->ZAT18   <-----------RAV1(1)     --------->ARR11(3)            <---------AtLEC2  <---------ZAT18 ---------AtMYB61          <---------ARR11(3)           --------->ATHB12   <---------ZAT14     <----- -------DOF2            >>>>>>>>>TBF1         ---------->DOF2   ----------------->AGL3    <----------DOF2   ttttggtgttggagaagaagagagaagaagaacttggtttctctctctaaaagtttattgcttggctccataaaaagtgcacctttttctctcttttctt  20877400                                                                     <-------TEIL        --------->LBD16                                           --------->ZAT18   <------ZmHOX2a(2)          <---------ANAC46                                      --------->TOE1(1) <---------MYB52(1)        <---------GLK1(2)                                      --------->TOE2(1)--------->LBD16       --------------------->WRI1                                     ------>ZmHOX2a(1) <-----------HVH21     <----------DOF2                                     --------->LBD16  <---------ANAC58 <---------At5g28300                                     <---------LBD16  <---------ANAC58<-----------GT1  <---------LBD16 -----DOF2                           ===============================HOX2a_HOX2a   --------->ARR11(3)   tctctctctctctctctctctctctctctctcacttctcctcggatgcactattgtccgtgagatcagagattcaccctctttagattttgcgcagaaac  20877500                                      ------>ZmHOX2a(2)                                     --------->GLK1(1)                                     <------ZmHOX2a(2)                                    <---------ZAT18                                    --------->ARR11(3)                                   <---------ANAC46                                   --------->GLK1(1)                                     <---------ANAC58                              --------->ZAT2                                             --------->ANAC55(2)                              --------->At4g35610                                        <---------ANAC55(1)                              <---------At4g35610                                --------->ANAC58                              <---------ZAT2                                     --------->ANAC58                        <---------ARR14(2)                                     ---------->DOF2                        <-----------ARR10                                      --------->ZAT14<------                   <-----------HVH21<---------ARR11(3)             <---------ATHB12      <---------ANAC58    --------->ANAC46    --------->ARR14(2)  <---------ZAT6        <---------TOE2(3)      <---------ANAC55(2)   ttttgcccacaattttgtattcgtcaaatctgagctgagatctctagagtgagaaaatgagcatcactaatgaagaagcagtgaagcaattgcgtgcttt  20877600                                                                              --------->TOE2(3)                                                                            <---------ARR11(3)                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                      ------>NtERF2                                                                   <---------At4g35610                                                    <---------ANAC58 --------->WRKY12                                                <---------ANAC58   --------->At4g35610                 <---------AHL20(2)             <---------ANAC58  ------>ZmHOX2a(2)               <----------DOF2                <---------TOE1(3)  <------ZmHOX2a(2)              <-----------------AGL3          <---------TOE2(3) <---------ARR11(3)         <---------ANAC46                <----------DOF2        --------->ARR11(3)         <---------ANAC58             <-----------GT1<----------DOF2 ----------->HVH21            <-- ----DOF2<---------ANAC58            <-----------GT1<---------ANAC58 ----------->TGA1     <---------At4g35610   aatggaagatggtgtgtctttatttgggttttcaatgttttaacttttaagcttgctttgtttgaagatcgctgacgaaatctcaaattttgagctaatt  20877700                                                    ----------->GT1                        --------->At4g35610                                                  <--------P<-----------GT1                <---------At4g35610     <---------DAG2<---------At4g35610        <---------ANAC46                          <-------TEIL     <----------DOF2    <---------YAB1      <---------ARR14(2)                <----------DOF2 ---------GT1      <-------GAMYB            --------->ARR14(2)           <---------At4g35610 ------->GAMYB   ttacttacttttggtattgacagttgatgattcactcagagagtcgtatcgggttagtaaattcacttgttttttagatgctttgaaagattcaactccc  20877800  Previous    Next  AGI:  At1g55840.1    Description:  SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein. similar to SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G47730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64059.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074) Range:  from: 20877268    to: 20879938    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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