Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ------>ZmHOX2a(1)                                           ------>ZmHOX2a(1)          --------------->AGL15                                  <---------ARR11(3)     --------->TOE2(3)                               <---------WOX13(1)  --------->YAB1  <----------DOF2                ---                     --------->SPL7 ==============HOX2a_HOX2a     <---------ANAC58               <--- --------------AGL1<---------SPL7 --------->ARR11(3)    <---------HSFB2a(1)                   ------- --------------AG  --------->TOE1(2)=================HOX2a_HOX2a  <---------ANAC58            ------- >ZmHOX2a(1)       --------->TOE2(2)------>ZmHOX2a(2) <---------GLK1(2) <---------YAB1        -------   caagtataggtaagaatacaacgtacgaagaagattgatctcttcctcctaaatcagaaccttggtttgcttctacgattagaaactgagtctcacaagg  20842000                                                  --------->LBD16   <----------DOF2                              <---------LBD16                    ----------->GT1 ------>GLK1(2)                             <---------AHL20(2)                    --------->ANAC58 ------GLK1(2)                          --------->ATHB51                          --------->ANAC58 -->ANAC58             <----------DOF2  --------->AHL20(2)                    ------>NtERF2 -->ANAC58     <---------ZAT18       --------->YAB1                --------->TOE1(3) -->ANAC46<---------MYB52(1)     --------->MYB46(3) --------->SPL7 --------->TOE2(3)   aatctctttcccattagtccccattctttgagtcatccaccataatttaaaccggaagacacacataaaccttaggtctctgccaaggaaaaaaaaaaca  20842100                                                 ---------->DOF2                                       --------->At4g35610               --------->ANAC55(2)     <---------At4g35610 ---------->DOF2               --------->ANAC58   ----------->HVH21       <------ZmHOX2a(1)                       ---               --------->ANAC58 <---------ANAC55(2)  <---------REM1(1)                          <---- <-----------GT1                --------->ANAC55(2)  --------->ALFIN1    --------->ZAT6         -----   tttataccctaagcctcaagtaattcaacaaattatgtgacatctaacaacaaaagtgtaggaaagggattttgaacagtactcgagtttgccaagggag  20842200                                   --------->At4g35610                                  --------->DEAR3(1)                                 <------NtERF2                                ------>NtERF2                               <---------bZIP60(1)                            ----------->HVH21                            ----------->TGA1                          <---------bZIP60(1)                          <---------bZIP60(2)                          --------->bZIP60(1)   <------NtERF2                          <---------TGA1a     --------->RAP2.3(3)                          <---------ANAC55(2) --------->RRTF1(3)     --------->ZAT2                          <---------ANAC58    <---------ANAC46       <---------At4g35610                          --------->O2        --------->DEAR3(1)     --------->At4g35610                          <---------O2        --------->RAP2.3(2)    <---------ZAT2                 <              --------->LBD16  <---------ANAC46------>NtERF2        --------->GLK1(2)              <-            <---------LBD16 --------->ALFIN1 <------NtERF2<---------ANAC58                       ----          <---------SPL7  --------->TGA1a    --------->RRTF1(1)   --------->LBD16                ----         <---------ANAC58 <---------ANAC46   --------->ATERF1(1) --------->LBD16                -----         <---------ANAC58 --------->ANAC55(2)--------->RAP2.3(1) --------->ANAC46              ------        <------NtERF2  ----------->TGA1      --------->ERF1     --------->HSFB2a(2)            ------       ------>NtERF2   ----------->HVH21    ------>NtERF2 <---------ANAC58  <--------P       --------       <---------MYB46(3) <---------ANAC58  <---------ATERF1(1) <---------HSFB2a(2)         ---------       --------->ABI4(2)  <---------ANAC55(1)--------->DEAR4(2)<---------LBD16              <-------- -------->ARR10       ------>ZmHOX2a(2)    --------->ANAC46  <---------ARR14(2)             --------- -----At4g35610      <---------At4g35610  <---------ABI4(2)  --------->ARR14(2)     --------->ARR11(3) ---->At4g35610      --------->At4g35610------->TEIL   <---------TOE2(3)  ----------->GT1  <---------LBD16   aagacacggtggcttccggtttgatctgacgtgacgccgatgaacgcgccgtcgattaaggcgtttcccgaagctggggtaactaagacattctccggaa  20842300                                        <---------DEAR3(2)      ------->GAMYB                               <---------ARR14(2)              --------->MYB46(3)                               --------->ARR14(2)             ------>MYB83                               <-----------ARR10              ------>MYB46(1)                              ------>MYB83                  --------->MYB46(3)   --------->REM1(2)        --------->AtMYB61               --------->AtMYB61 --------->LBD16            <---------MYB111(1)        --------->LBD16 ---------ANAC46         --------->AtMYB61            --------->ANAC46 ----------------------TaNAC69(2)       <------MYB83 <---------LBD16  <---------ICU4 ----->ANAC58            --------->DEAR3(1)   <---------At4g35610<-----------HVH21--------->REM1(2) ----->ANAC58            <---------ALFIN1 ----------->TGA1  --------->DEAR3(1) <---------ANAC46 ---->SPL7              --------->MYB46(3)----------->HVH21--------->DEAR3(2)  <---------ANAC58    -- ---->DOF2          ------>MYB46(1)     <------MYB46(1)------>NtERF2 --------->ICU4                -- --->ARR14(2)       ------>MYB83       <---------MYB46(3)  <------NtERF2       <---------ANAC58   --- ->LBD16      --------->WRKY38(1)      <---------DEAR3(1)  --------->MYB46(3) ----------------->AGL1 >ANAC46      ----------->HVH21--------->GLK1(2)     --------->RAP2.6(3)      <-----------------AGL1 -HSFB2a(2)  <-----------HVH21------>MYB46(1)<---------ANAC46--------->MYB52(1)--------------->AGL15 >HSFB2a(2)  --------->At5g28300       <---------DREB2C(2)------>NtERF2  <-----------GT1        -----   cgccgtgaagaacacggtgacctagcaccaccaaatctgagtcggtgacgctgattccggcaccaacggtcattgttacttccttgtagggaaaacaaaa  20842400                                                                                          <---------ANAC55(1)                                                                                          <---------bZIP60(2)                                                                                          --------->O2                                                                                          <---------O2                                                                                          <---------TGA1a                                                                                          <---------ANAC58                                                                                          --------->ANAC55(2)                                                                                          <---------ANAC58                                                                                          ===========                                                                                          <---------ANAC46                                                                                          <---------ANAC55(2)                                                                                          >>>>>>>>>>HY5            --------->TOE2(3)                                                            ----------->STF1    --------->YAB1                                                                <---------DOF5.7(2)    -------->HAHB4                                                       --------->HSFB2a(2)    <---------ICU4                                                       <---------HSFB2a(2)       --   --------->ICU4                                                      <---------AHL20(2)----------->bZIP911(2) --------->YAB1                                                      <-----------TBP    <---------TGA2(2) ------->AHL20(1)      --------->ANAC58        <---------AHL20(2) <---------ARR11(3)   ----------->HVH21 ------->AHL20(2)      --------->ANAC58     *TSS                  --------->ARR11(3)   ----------->TGA1 ------>YAB1--------->TOE1(3)              <---------AHL20(2)    --------->YAB1 --------->DOF5.7(2)<- ---->AHL20(2)         --------->ANAC46 ----------->GT1      <------ZmHOX2a(1) --------->TOE2(3)  <--   aaataataatgaaacctcaagactcacgctactctcgagagtgagttaattagttggacaagaggaatgatatttatagaacgttatcgatgacgtgttc  20842500                                             --------->ANAC55(2)                                             <---------ANAC55(2)           --------->ANAC58               <---------ARR14(2)           --------->ANAC58               --------->ARR14(2)           --------->ANAC46               --------->ARR11(1)        <---------ARR14(2)              <---------------AtSPL8        --------->ARR14(2)              ----------->ARR10       ------>NtERF2                --------->YAB1   --------->AHL20(2)      <---------ZAT18            --------->YAB1 ------->TEIL      ----------->HVH21   <---------AHL20(2)--------------->AtSPL3      --------->ZAT18     --------->AHL20(2)--------------->AtSPL8                <---------ANAC46    <---------At4g35610  --------->AHL20(2) <-------TEIL                          ----------->GT1<---   --------->MYB52(1)    <---------AHL20(2) <---------------AtSPL8        ----------->GT1        <--- =========================bZIP_DOF <---------YAB1    <---------AHL20(2)  --------->DAG2          <--- ------->ARR11(3)        --------->AHL20(1)--------->ARR14(1) <---------------AGL15         --------- --------ARR14(2)        <---------AHL20(1)--------->CCA1(2) ======================================== -------CCA1(2)---------->DOF2 ----------->GT1  <-------TEIL <-----------------AGL3         <--------   atatctagcggacacgaaaatgcaaaataaaattagtataataagatacgtacatttatttgaacaaaatttggaaaggtaattcggtgaatttctattt  20842600                           --------->ANAC55(2)                           <---------ANAC55(1)           --------->YAB1  <---------ANAC55(2)          <---------YAB1   <---------bZIP60(2)         --------->AHL20(2)<---------ANAC46                                    --------->YAB1    --------->MYB46(3)   --------->MYB52(1)                                <---------ICU4 ------ANAC58   <---------YAB1                                             -------->HAHB4  <---------YAB1 ------ANAC58 --------->YAB1                  --------->ATHB12             <---------AHL20(2)  <----- ------ANAC46 --------->ATHB12<-----------HVH21                           <---------YAB1 --------->CCA1(2) ------>AGL15<---------YAB1<---------ANAC58<---------ANAC58               --------->ICU4 --------->GLK1(1) =======MADS_MADS        <-----------GT1   <---------ANAC58             <---------ICU4  <---------ARR14(2) -------AGL15--------->ICU4<---------ANAC58<---------ANAC46            --------->ICU4   --------->ARR14(2)   cttgtaaccaatattatgattagagaataacgtgtcaattgtttggcgtgattgtaaatgctgaatagttgacataattattcatagacggatatgattc  20842700                                                      -------->ATHB1                                                      --------->ATHB12                                                      <---------ICU4                                       --------------->AGL15                                  <---------ANAC58   <---------ATHB12                                  <---------ANAC58   <---------YAB1                    <-----------GT1    <---------------AGL15                <---------TOE2(3)---------->ID1      --------->ICU4               <---------ARR11(3)    --------->ARR14(2) <---------DAG2  <----------DOF2--------->YAB1             <---------CCA1(2)    <---------ARR14(2) <----------DOF2<-----------------AGL2                   ------>ZmHOX2a(1) --TEIL   <---------YAB1   <---------YAB1         ------------>ATHB5        ------>ZmHOX2a(1)  ------   atttcgaatatgatgtttaagtttactttattcttgtcgttcttttttgggtttaatcattgaaatcgcaaactaatcctcctatatctatttgatgcac  20842800                                                                  <---------DAG2                                                          --------->GLK1(2)                                                          --------->ARR14(1)                   <---------ZAT14                       --------->ARR11(3)                   --------->ZAT14 ----------->GT1       <---------GLK1(2)             --------->TOE2(3)---------->DOF2            --------->ARR14(2)          <-----------GT1<---------ANAC58                <---------ARR11(3)                        <-   --------->AHL20(2)    <---------ANAC46            ---------->DOF2                              --- ->TEIL--------->YAB1    <---------ANAC58 ----------->GT1<---------ARR14(2) <---------YAB1       ----   catgtataaatataacctcactacaatgcttgtaaagttgtaatttgttaaatataaaagattctctacctttcaaatatgaaaatcgaaaatgctatga  20842900  Previous    Next  AGI:  At1g55740.1    Description:  ATSIP1 (ARABIDOPSIS THALIANA SEED IMBIBITION 1); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Uncharacterized glycosyltransferase At1g55740 [Arabidopsis Thaliana] (GB:Q84VX0;GB:Q9LFZ7); similar to ATSIP2 (ARABIDOPSIS THALIANA SEED IMBIBITION 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57520.1); similar to ATSIP2 (ARABIDOPSIS THALIANA SEED IMBIBITION 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57520.2); similar to DIN10 (DARK INDUCIBLE 10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20250.3); similar to unnamed protein prod Range:  from: 20839032    to: 20842444    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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