Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ----------->GT1          <---------ANAC58                                            ------>MYB46(1)            <---------ANAC58      ---------->DOF2                       ------>MYB83              --------->ZAT2 --------ICU4            ----------->GT1  ------->GAMYB        --------->LBD16 -------YAB1          <-----------GT1   --------->ANAC58      <---------HSFB2a(2)     ------->GAMYB ---->YAB1         <---------MYB52(1)   --------->ANAC58      --------->HSFB2a(2)   <---------At4g35610 -----ICU4        <-------GAMYB  --------->ANAC46          <---------ARR14(2)       --------->At4g35610 ----ATHB12      --------->ANAC55(2)  --------->MYB46(3)   --------->ARR14(2)--------->ANAC58 ->WOX13(1)      <---------ANAC55(2)--------->AtMYB61      --------->GLK1(2) --------->ANAC58 -------   atcagtatcaaagagcattccgttatacagtatataaaccacaaccaaatgtgaaaacaagaatccagaacaagcttgcacgattcaactgaaaatgtgt  20837800                 <---------AtLEC2              <---------ARR11(3)      --------->TOE1(3)                    <---------ANAC58                                         -      --------->TOE2(3)                    <---------ANAC58                                         <     --------->At4g35610            --------->YAB1                                           --------    <---------TOE1(3)              <---------ATHB12              --------->ANAC58        --------->TOE2(3) ---->GT1   <---------ICU4       --------->WOX13(1)              --------->ANAC58        --------->TOE1(3)   taatctaagcttaatctttccatgaaatcagagcccaatcaaatgacttgatatttgaaaaacacaaacccaattccatccaatatcaaaaccctaaaac  20837900                                                            --------->At5g28300                                         ------>ZmHOX2a(2) ----------->GT1                                      --------->ATHB12  --------->MYB52(1)                                   --------->YAB1     ------->GAMYB                                ---------->DOF2      --------->ANAC58 --------->CCA1(2)            <---------MYB59        --------->ANAC46   <-------TEIL                < -------->ARR14(2)          <---------ARR11(3)    <---------WRKY12     --------->GLK1(2)--------->TOE1(2) ---------ARR11(3)--------->AHL20(2) <---------YAB1  --------->ANAC58  --------->CCA1(2)--------->TOE2(2) -->DOF2 -------->P         --------->ARR11(3)   <------ZmHOX2a(2)    --------->ARR11(1)<---------MYB59   cagatataaactaccaagaatcaaatagaagacctaaagatgatcggagggatcaacgaaacggtgaagagagattcgaaagttttagtacctaagaaga  20838000         <-----------HVH21        --------->YAB1       <---------ATHB12                                --------->YAB1 --------->ARR11(3)     --------->MYB52(1)                          ----------->RAV1(1)  <---------ARR11(3)   --------->MYB46(3)                       --------->GLK1(1)        <---------CCA1(2)      ---------  --------->ANAC58                          <---------GLK1(1)        <---------GLK1(1)<---------LBD16  --------->ANAC58                     --------->At4g35610      <----------DOF2    <<<<<<<<<TBF1 --------->WOX13(1)                    <---------At4g35610 <-----------GT1      <<<<<<<<<TBF1 ---------WRKY12                      ----------->RAV1(1)--------->AHL20(2)  <<<<<<<<<TBF1  <--------   agtcaaccaatggtcagagaagaaagacttgaacaagttgcagcagaaatcccacaaaaataaacactttgatatcttcttcttcttcttcggagatttg  20838100                                                                                    <---------HSFB2a(1)                                                                                    --------->HSFC1(2)                                                                                    --------->HSFB2a(1)                                                                                    <---------HSFC1(2)                                                                                  <-----------ARR10                                                                                  <---------ARR14(2)                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                     <---------ANAC58                    <---------AHL20(2)                               <---------ANAC46<----------DOF2      <---------ATHB12                                               <---------ANAC58*TSS ------>ZmHOX2a(2)  <---------YAB1                 <---------At4g35610     ------>ZmHOX2a(2) >>>>>>>>>>>>>>>>>LFY        <---------At4g35610   --------->At4g35610 ----------->HVH21 >ARR14(2)      <----------DOF2            --------->GLK1(2)        <-------TEIL <------ZmHOX2a(1) -ARR14(2)--------------->AtSPL8      ---------->DOF2       --------->ZAT14=============HOX2a_HOX2a   tgatcccaatggtctgttcttttttattgagagatgatactaaagaatttgggagatgtcagtaaacaagtgcgtgatcgagaggaactttccttcttct  20838200                                                          ----------->GT1                                                   <---------YAB1                                             --------->AHL20(1)        --------->AHL20(2)                                             --------->AHL20(2)        <---------AHL20(2)                                            <---------ATHB51          --------->AHL20(2)                                            <---------ATHB12 <---------AHL20(2)                                            --------->AHL20(2)        --------->AHL20(1)                                     <----------DOF2  ------->TEIL    <---------AHL20(1)                               <-----------GT1  <---------AHL20(2)    <---------AHL20(2)    ---------                           <---------AHL20(2)<---------AHL20(2) <---------WOX13(1)     ----------->GT1       ---------->DOF2    <---------AHL20(2)<---------AHL20(2) <------------CBF      ---------->DOF2   actcatttttaaagacatgtttcgattttttattttcttctttcaaataatttatgaaactagttaattgaatttatttagacttagaaaagaaaaaaga  20838300                                                  ----------->GT1             ------->TEIL         --                                 <---------ARR11(3)                           <---------YAB1      ---                                 --------->AHL20(1)           <---------TOE2(3)               <------       <---------DAG2            <---------AHL20(1)     <----------DOF2    <---------ATHB12   ------- ->DOF2<----------DOF2           --------->ARR11(3)  <-----------GT1<---------YAB1            -------   ctattggaactttatctaatttccgatttttaaaaaatatttggactcaatattgttactttctaatgttatgactaatgaatattgaaatatatgtgaa  20838400                                                            --------->AHL20(2)                                                            <---------AHL20(1)                                                            --------->AHL20(1)        <---------ZAT6                                      <---------AHL20(2)      <---------At5g28300  <------ZmHOX2a(1)               --------->AHL20(2) ------->At5g28300--------->AHL20(2)                   --------->AHL20(2) -------->GT1     <---------AHL20(2)           <---------ANAC58  --------->AHL20(2) ---ZAT14       --------->CCA1(2)              <---------RAP2.6(2) -->ZAT14      <---------ARR11(3)              <---------ANAC58  <---------AHL20(2) -->ZAT18      --------->ARR11(3)  ---------->DOF2 <---------ETT(2)             ----------->GT1    --   ctgtgaattactgtgaagatttaaatataggagaaaaaaaagagcaattgcggtcgataaattttattttaatatcagtttttagttaaaacatagtggt  20838500               <---------YAB1             <-----------GT1          --------->ALFIN1        <---------O2        <---------bZIP60(2)        <---------TGA1a        <---------ANAC58        <---------ANAC46        --------->ANAC55(2)        <---------ANAC55(1)                 --------->RAP2.6(2)        <---------ANAC55(2)             --------->MYB46(3)        --------->O2                    --------->ETT(2)        <---------ANAC58                <---------ETT(2)        <---------AHL20(2)                <--        >>>>>>>>>>HY5                 --------->MYB52(1)        --------->AHL20(2)          ---------       ----------->STF1           <-----------GT1              <---------AHL20(1)           <--------      <---------TGA2(2)      <---------AHL20(2)                <---------AHL20(2)          <---------AHL20(2)     ----------->TGA1        <---------AHL20(1)                --------->AHL20(2)   <---------TOE1(3)     ----------->HVH21       --------->AHL20(1)    --------->ANAC55(2)              <---------TOE2(3)   --------->YAB1            --------->AHL20(2)    --------->ANAC58          <-----------------AGL1--   <---------ICU4           --------->AHL20(2)     <---------ANAC55(2)    <---------DAG2   --------->AHL20(2) ---->ZmHOX2a(1)--------->TOE2(3)--------->AHL20(2)--------->ANAC58       <----------DOF2  <---------AHL20(1)   cctaaacatgacgtgttaccatagtccagaataaattaactatcgaccgcatcaagtaatcccaatttttttaaaacttttttgttaaggcaattttttt  20838600                                             <---------ICU4                       <---------HSFB2a(2)  <---------YAB1                       --------->HSFB2a(2)  <---------AHL20(2)                    <---------ARR14(2)    --------->YAB1   --------->ATHB12 --------->ARR14(2)----------->GT1                                       --------- -------YAB1     <---------ANAC58 <---------AHL20(2)                     <----------ID1     <-------- >AHL20(2)    <----------DOF2    <---------AHL20(2)            <----------DOF2             --------->RVE1(1) -AHL20(2)<------ZmHOX2a(2)  --------->AHL20(2)   --------->TOE2(3) ---------->DOF2      --------->AHL20(2) ------->ATHB12  <---------ANAC58--------->AHL20(2)        <-----------GT1   --------->AtMYB61  -----   atcattgattcgatccctttcgtttctggacttaaataaatcgtttataatttcttaaaattttcctttcaaaagacgaccaaaaaaaaaaaaaaatcct  20838700  Previous    Next  AGI:  At1g55730.1    Description:  ATCAX5 (calcium exchanger 5); cation:cation antiporter. Identical to Vacuolar cation/proton exchanger 5 (CAX5) [Arabidopsis Thaliana] (GB:Q8L783;GB:Q9LFZ7); similar to CAX2 (CATION EXCHANGER 2), calcium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G13320.1); similar to ATCAX6 (calcium exchanger 6), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT1G55720.1); similar to low affinity calcium transporter CAX2 [Arabidopsis halleri subsp. halleri] (GB:CAE30484.1); contains InterPro domain Calcium/proton exchanger superfamily (InterPro:IPR004798); contains InterPro domain Calcium/proton exchanger; (InterPro:IPR004713); contains Inter Range:  from: 20834718    to: 20838185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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