Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(2)                            --------->YAB1                                                   xxxxxxxx                           <---------YAB1                                                    --------                         --------->AHL20(2)                                                --------->MYB52(1)                     <---------YAB1                                                     xxxxxxxxxxxxx                    <---------AHL20(2)                                   ------------------------>ANAC81                    --------->AHL20(2)                            ----------->GT1   --------->AHL20(2)       --------->ANAC46  --------->YAB1                        <----------DOF2     --------->AHL20(2)   aaaggctacacaaaacaaatattaaaattataaaaatgagagagaaacttgattttagttcatttctttggtgaaaatgagaaaaataaaaaacaacgta  20829400                                                                             ---------->ID1                  <----------DOF2                                        <---------ANAC58                 --------->TOE2(3)                                       <---------ANAC58          --------->ANAC58                                          <---------ANAC58     <----------DOF2     <------ZmHOX2a(1)<---------TOE2(3)            <-----------HVH21--------->MYB52(2)<-----------GT1 xxxxxxxxxxxxxxx>smallRNA(fl3)    <----------DOF2 --------->ANAC46  <---------ANAC58 ---------->ID1 --->GT1  --------->ANAC58  <---------YAB1     <---------ARR14(2)   <---------ANAC46<-----------GT1 xxxxxxxxxxx>smallRNA(se3)<-----------GT1      --------->ARR14(2)  <-------TEIL<----------DOF2<------   atacagaggacgaagcaaacctttgagattaccattctttggtttctccaatccgtcatactcatatggttcgtggtttgtctttttttctctttacttt  20829500        <---------ANAC46      <---------ICU4                 <---------AHL20(2)     --------->ICU4                  <---------YAB1                    --------->ANAC46  <---------AHL20(2)              <---------ARR11(3)                 <---------ALFIN1  --------->AHL20(2)              --------->AHL20(2)            --------->ANAC58 <---------AHL20(2)               <---------AHL20(1)            --------->ANAC58    ----------->GT1 <---------AHL20(1)               --------->AHL20(1)          ---------->DOF2  --------->CCA1(2) <--- --------->AHL20(2)   <---------At4g35610                   --------->LBD16  --------->YAB1      ---- ----DOF2             --------->At4g35610           <-----------GT1----------->RAV1(1)   ---------->DOF2   caatttaattatgtggaaagacttagcagaccacaaaatattatttcggtgtttaaacaatcccgaaagcaacacagaatgatataagtttaaaaggagt  20829600                                                                        --------->AtMYB61                                                                       --------->MYB46(3)                                                                     <---------ALFIN1                                                                     --------->AtMYB61                                                                     --------->DEAR3(1)                                                                    <------NtERF2                                                                   <---------ATERF1(1)                                                               --------->bZIP60(2)                                                               --------->ANAC58                                                               --------->ANAC58                                                             --------->MYB52(1)                                                         ============================HOX2a_HOX2a                                                      <---------HSFB2a(2)                                                      <-----------RAV1(2)                                                      --------->HSFB2a(2)                                                    ------>MYB83------->GAMYB <------ZmHOX2a(2)                              <-----------RAV1(1)   -------->P --------->ANAC46                    --------->MYB46(3)              ------>MYB46(1)------>NtERF2               <-----                    --------->DEAR3(2)             ==================================HOX2a_HOX2a      <---------MYB52(2)     <---------TOE2(3) --------->GLK1(2)<-----------TGA1              <------NtERF2 --------->ANAC58 <---------ARR14(2)           <---------ARR14(2) --------->PCF2            --------- --------->ANAC58 --------->ARR14(2)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------REM1(1)   <------ZmHOX2a(1)     ------>ZmHOX2a(1) <------ZmHOX2a(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------->GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------>ZmHOX2a(1)--------->MYB46(3)   --------->ANAC46   tgtaagaaacaaaccttgaggaaccgatgttgatgttgttcctatgaagaatcctaccaggagcaacggcaccaccatcgatcaactctctaagccccca  20829700                                                    <---------MYB52(1)                                                   <-------GAMYB               --------->HSFB2a(2)                                                   --------->At5g28300    -------->P                                                  ----------->GT1        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                  <---------MYB46(3)   <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)          ------>ZmHOX2a(1)                      <---------RAP2.6(2)  --------->ANAC46      <-------PIF5                               <---------DEAR3(1)   --------->ANAC58      ------->PIF5                               <---------ANAC46     --------->ANAC58     --------->ANAC58                          ------------>AtMYB77<xxxxxxxxxxxxxxxxsmallRNA(i)     --------->bZIP60(2)                     <-------MYC3       <-----------HVH21     --------->ANAC58        <<<<<<<<<TBF1   ------->MYC3     <---------HSFB2a(1)     --------->ANAC46    ------>ZmHOX2a(1)  --------->O2      --------->HSFC1(2)                    -   <---------ALFIN1 <---------At4g35610     <---------O2      <---------HSFC1(2)            ------>ZmHOX2a(1) ----ALFIN1       <-----------GT1         <---------ALFIN1    --------->At4g35610           --------- >RAP2.3(3)    <----------DOF2       ------>ZmHOX2a(1)     <------ZmHOX2a(1)   <---------HSFB2a(2) <-   attctccacgtcctcttctttcacctccttcttcttctccttctccacatggcggttattaggaagcttcacaggcaacctctcgaagtaattcctgaaa  20829800                  <---------ARR11(3)         <-------MYC2         ------->MYC3         ------->MYC2         <-------MYC3  <---------ANAC46    --------->AtLEC2 --------------->AGL15  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    --------->DOF5.7(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)          --------->TOE1(3)            ------>MYB83         <-- ------->P   <---------YAB1                     --------->TOE2(3)            ------>MYB46(1)    <xxxx >LBD16------->TEIL<---------YAB1           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         ----------->HVH21 ----------GT1    --------->ARR11(3)   ------->TEIL    --------->TOE2(3)  --------->MYB46(3)  -------   cttaccatgcacgtttttattatcttcgtatagaaagaatgaagcttcaacctcaagcgttaacaaatgcagagaaaccaacttaaaaaaactgacatgc  20829900                                                                                --------->AHL20(2)                                                                             <--------HAHB4      <---                                                                            --------->ICU4     ------                       ----------->GT1                                      <---------YAB1     <-----                  ----------->HVH21                                       --------->YAB1    <--------               --------->DAG2               <---------AHL20(2)      <---------ICU4          ---------               <---------TOE2(3)       <---------ARR11(3)           --------->YAB1         <---------YAB1         <-----------TBP               --------->ARR11(3)          <---------ATHB12      --------->YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->YAB1       --------->AHL20(2)--------->ATHB51 ------- -------At4g35610 --------->ALFIN1 --------->YAB1          <---------AHL20(2)<---------ICU4--------->ICU4 xxxxxxxxxxxxsmallRNA(i)           <---------ICU4<---------YAB1--------->AHL20(2)  --------->TOE2(3) -->AtLEC2<---------AHL20(2)--------->ZAT6 --------->AHL20(2)  <---------AHL20(2) <---------ANAC55(2)   agcgtcttgcattttataaggtgaagggttacactaaaaatgatattaaatatgatactaaatatttaaatcatggtcataattacataaatgataatta  20830000                      <---------WOX13(1)                                                          <--        --------->ANAC58                                                                     --------   <---------ZAT6<----------DOF2              >>>>>>>>>>WRKY11                               -------- ------YAB1--------->MYB52(1)                 >>>>>>>>>>WRKY6                                <------- --->YAB1  --------->ARR14(2)                --------->WRKY45                        ---------->DOF2 ----ICU4  <---------ARR14(2)                --------->WRKY38(1)                    --------->AHL20(2) -ICU4  --------->ANAC58                     --------->WRKY12                   --------->AHL20(2)--- >YAB1  --------->ANAC55(2)                <---------At4g35610    --------->ICU4<---------AHL20(2)<-- -->ICU4<---------ANAC55(2)             --------->ZAT14       ------------>CBF --------->AHL20(2) ---   tgttagtgtaacgtaactgctttgatttatgaaatagaacagtttagttgactaaaaaaaaaactgcaatagttagacataataaataaaagaaaacgtg  20830100                                                                                                   --                                                                                                  ---                                                                                           ----------                                                                                       --------->AHL20(1)      ------->MYC3                                                                     <---------AHL20(2)      <-------MYC3                                                                     <---------AHL20(1) -------bZIP60(1)                                                                     --------->AHL20(2) --->GT1                                                                              --------->YAB1 ->ANAC55(2)  <---------AHL20(2)                                                     <---------YAB1<- --ANAC55(2) --------->AHL20(2)                                --------->ATHB12   <---------AHL20(2) ------>bZIP60(1)                 ----------->RAV1(1) <---------YAB1              --------->AHL20(1) -------TGA2(1)           <-----------GT1       --------->AHL20(1)                --------->AHL20(2) ------>TGA2(1)        --------->YAB1  --------->MYB52(1)     <---------AHL20(2)  <---------AHL20(1)   atatcacatgtgtcattaaatagaatattaacctcacaacataactgaaacatattatgagtaattcattgttttttcattcaatttattatattgtaaa  20830200                                                                                              <------                                                                    <---------AHL20(2)        -------                                                                   --------->AHL20(2)        --------    <---------ICU4                                  --------->CCA1(2)                        <------- ------->ARR11(3)                    <---------AHL20(2)     --------->AHL20(2)       <----------ID1 ------>YAB1                  <-----------RAV1(1)  <---------ARR11(3)              --------->At4g35610 ->GT1                     <---------MYB52(1)      --------->ARR14(2)              <---------At4g35610 --------ARR11(3)         <-------GAMYB            --------->ARR11(3)         <---------ANAC55(2)   tgatatttatgacttaagttatatggtcagttatgttgtttattttgtttcaagatatacaaataaacatttaatcgattatgtgagaggccaaattttt  20830300  Previous    Next  AGI:  At1g55710.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53342.1) Range:  from: 20829590    to: 20829808    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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