Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------MYB52(1)                                          <----------DOF2                                     --------->KAN4(2)                                    <---------HSFB2a(1)                                    <---------HSFC1(2)                 <---------ANAC46                                    --------->HSFB2a(1)                <---------ANAC58                                    --------->HSFC1(2)            --------->STY1(2)                                    <---------KAN4(1)         <------ZmHOX2a(2)                                    <----------TaMYB80       <---------AGP1                                    --------->KAN4(1)        <---------ARR11(3)                                   <---------KAN4(2)         --------->AGP1                                   ---------->TaMYB80  <---------YAB1  <---------ANAC58     ----------->GT1       <---------AHL20(2)         --------->AHL20(2)     <---------ANAC46      --------->AHL20(2)    <---------YAB1------>ZmHOX2a(2)       <---------AHL20(2) ----->GT1            <---------AHL20(1) --------->TOE2(3)   --------->ARR11(3)----------->GT1   ----   ttatattgtgtaaaacatagttagtatattttaatggaatattcctttattttgatttttatagatctagctatcgtggagaagtgaattttttttcaaa  20824900                                                                  <---------ALFIN1                                                                --------->ANAC58                                                                --------->ANAC58                                    --------->YAB1          <-----------RAV1(2)                                   <---------YAB1           --------->MYB46(3)                    ---                                 --------->YAB1            --------->At4g35610             <---------HSFB2a(2)                                --------->ICU4             <---------At4g35610             --------->HSFB2a(2)                                --------->AHL20(2)        ----------->RAV1(1)              --------->LBD16                              ------->TEIL              <---------ZAT18                <---------ARR14(2)                            <-------TEIL                --------->ZAT18                --------->ARR14(2)                         --------->At4g35610         --------->SPL7------->TEIL       <---------GLK1(1)  --------->ATHB12       <---------At4g35610     <---------------AtSPL3    ----------->HVH21      --- ----->AHL20(2)     ----------->HVH21        <---------AtLEC2   --------->ANAC46  ----------->GT1 ---   aaaatgagtgagaaattttctaatgacagatgcatttattatagtttgcaagtagtaccgcaccagacgcaccttgtctgaagggagtaaatccgagaac  20825000            >>>>>>>>>RAP2.2         <------------CBF                                     <-----------            --------->TOE2(3)     --------->AHL20(1)                    <-----------RAV1(1)       ------------>CBF           --------->ARR11(3)           ------->TEIL     <----------DOF2  <----------DOF2                 <---------AHL20(2)     <---------AHL20(2) <------MYB83 <----------- ------>ANAC58             ----------->GT1 <------------CBF<---------TOE2(3)<------MYB46(1) ------>ANAC58   --------->DAG2   <---------AHL20(1)    --------->AHL20(2) <---------AtMYB61    ----- ------>ANAC46  ---------->DOF2--------->AHL20(2) <----------DOF2 ------------>CBF   <------ZmHOX2a(1)   acgactttgtccaatctaaaaagtcaaactagttaaaatattgtctattggtctttgatttaatgtaactcaatttgttggtctttaggaaatagtacta  20825100                                                       ---------->DOF2                                                --------->ATHB12                                                --------->YAB1        ----------->HVH21                      <---------ATHB12      --------->ANAC55(2)                      <---------YAB1      <---------At4g35610<---------ANAC46    ------>ZmHOX2a(1)  <----------DOF2      <---------ARR14(2)    --------------->AGL15                             ------ ----AtSPL3     ---------->DOF2             --------->TOE2(2)                     ---------->DOF2 ----AtSPL8  <---------At4g35610            --------->TOE1(2)                 --------->YAB1   ------ ---->ZAT14  --------->At4g35610--------->YAB1<---------TOE1(2)            --------->YAB1      ------   aactctttaggtgacagctaaagcatgtctggtatggtaatggtatcctatgattagcaaagtctcgccttaacaaataagaataaaagggagtaaacct  20825200             ------>ZmHOX2a(2)           --------->ARR11(3)           <---------AGP1           <---------ARR14(2)           --------->ARR14(2)           <---------ARR11(3)           --------->AGP1          <---------CCA1(2)    --------->CCA1(2)   --------->ARR11(3)   <---------ARR14(2)                --------->ATHB12   --------->ARR14(2)       <---------DAG2        <----------ID1                                   <-   <---------ARR11(3)       <----------DOF2       XXXXXXXXXXXXXXXXXXXX>MIR837-3P             <------- --->TOE1(2) =============================HOX2a_HOX2a                                        <------- --->TOE2(3)<------ZmHOX2a(2)      ------>ZmHOX2a(1)                   <---------GLK1(1) --------->ARR11(3) --->TOE2(2)==============================HOX2a_HOX2a         --------->MYB52(1) <---------TOE2(3)<--   aagaatatatgcagatctaaaaactcttcactttctccttcatttgctaaaaaaaacaaaaaacaaatggaagaaatcacattgaagttaagttctcgtg  20825300                                                 <---------HSFB2a(2)                                             <----------DOF2                                            <---------ANAC58           ------->TEIL                                            <---------ANAC58     <---------WRKY38(1)           --------->bZIP60(1)           ------->PIF5            <---------WRKY45        --------->ALFIN1               ------->TEIL              <---------WRKY12      <---------ANAC58                <---------ALFIN1          --------->WRKY18(1)      <---------ANAC58              --------->ANAC46          <---------MYB46(3)                   --      <---------ANAC46              --------->ANAC58      <---------AtMYB61                        -- --------ZAT14         ------>ZmHOX2a(2) <-------PIF5   --------->CCA1(2)                          -- --ANAC58  <---------bZIP60(1)      --------->ANAC58   <---------ARR14(2)                     <------ --ANAC58  <---------ANAC46      <---------ETT(2)--------->HSFB2a(2)--------->MYB46(3)        ------- --------DOF2  --------->WOX13(1)<---------WRKY38(1)   --------->ARR14(2)                  --------->HSFB2a(2)   ctatactggtgtgtcgtcaatctgatccctctcagtcgacgcacttgctttctcgacgatatggtggtcaacgaatgtctaaatgcctcatttgcagaac  20825400                                                       <-----------GT1           <---------ZAT18                        <---------ARR11(3)       <---------ICU4                             --------->ARR11(3)    --------->YAB1                               --------->YAB1                                 <---- ------->ANAC58                               --------->YAB1                         <---------ANAC58 ------->ANAC46                        --------->TOE1(2)                             <---------ANAC58 ------->ANAC58                        --------->TOE2(2)                         --------->ARR11(3) ---ARR14(2)                     <---------YAB1 <---------YAB1    <---------MYB52(1) <---------ANAC46 -->ARR14(2)            --------->At4g35610  --------->ICU4     ------>ZmHOX2a(1)<---------ARR11(3)   caagaaacatcatcgcactaagtatcatctccattgtgatacctgcgattatgatattcacaagtcctgttatctcttaccaagatgtcgttcaatgcct  20825500                                                        --------->ALFIN1                                                       ------->MYC3                       --------->YAB1                                                       <-------MYC3                       -------->ATHB1                                                     ------->MYC3                        <---------ATHB12                    <---------MYB52(1)          ----------->RAV1(1)                  <---------At4g35610                   <-----------HVH21      <---------MYB46(3)                     ------>ZmHOX2a(2)                   --------->LBD16  --------->YAB1   <-------MYC3                ====================         <---------ALFIN1          <---------YAB1 <---------ALFIN1            --------->ATHB12    ---        <------NtERF2            <---------ICU4<---------ETT(1)         --------->LBD16  <---------YAB1 ------DOF2<---------ALFIN1      --------->YAB1----------->HVH21  <---------ARR11(3) --------->At4g35610   ttaactaggcctcacactctccgtgagggaaacgattatcacagtagttgcgacacatgtggagacgaggtctccgaaaatgatcggagctatcattgtc  20825600                                                                        <---------ARR11(3)                                                                     <---------ALFIN1                                                                --------->ANAC46                                                ===================================HOX2a_HOX2a                                                <------ZmHOX2a(2) --------->ANAC46                                        --------->LBD16         --------->ANAC58                    -                                       --------->ANAC58         --------->ANAC58                   --                                       --------->ANAC46       <-----------GT1                      <-              <-----------GT1          --------->ANAC58     <-----------HVH21           <---------DAG2 ====HOX2a_HOX2a                      <---------LBD16     ------>ZmHOX2a(1) --------->At4g35610    <- --->ZmHOX2a(1)                     ------->TEIL=================HOX2a_HOX2a------>ZmHOX2a(1)  ------   ctacttgtgaaatgtgttaccacaaggtttgcaacttgtacccgcatgagatcagacatccttttcacgcccaacatcctctgaaactcaccttctcctc  20825700                                 <-----------HVH21           --------->LBD16                                 <----------DOF2            --------->ANAC46                               <------NtERF2           ------>NtERF2                           ------>NtERF2              ----------->HVH21            <-----------RAV1(2)                         --------->ATERF1(1)     <---------HSFC1(2)              <-----------HVH21      <----------DOF2   <---------ZAT2           <---------HSFB2a(1)            <---------ANAC58 -------->GLK1(2)       --------->ZAT2           --------->HSFB2a(1)            <---------ANAC58 ------->ARR14(2)       <---------At4g35610      --------->HSFC1(2)            <-------TEIL --------ARR14(2)       --------->At4g35610    <---------ARR14(2)     <------ZmHOX2a(1)          ---- --------GLK1(2)      <------ZmHOX2a(1)        --------->ARR14(2)    --------->ZAT14 <---------At4g35610 >ZmHOX2a(1) --------->ATHB12<---------ZAT18  <------ZmHOX2a(1)      <---------ZAT18 --------->At4g35610   agattcttcttttactgatttgaaggagctgcccgcttcatggcaagaggaaccctccgactccgaaacagaggactccgatgcgtcagatgatgtctcc  20825800  Previous    Next  AGI:  At1g55700.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55380.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 20825267    to: 20827306    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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