Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------YAB1                                 <---------YAB1                               <-----------GT1                              <---------YAB1                                   --------->ICU4       <---------TOE2(3)      <---------AHL20(2)          <---------YAB1       <---------YAB1      <-----------GT1      <----------DOF2  --------->ARR11(3)               --------->YAB1  <----------DOF2       <-----------GT1     <---------ARR11(3)              <---------YAB1 ----------------->TaNAC69(2) --------->AHL20(2) <---------TOE1(2)        ----------->GT1        ---- -->YAB1            <---------MYB52(1)     <---------CCA1(2)      ---------->DOF2                ----   atcactttaaacgtttttatctgttatttctttttattattctacatatctcatgttttcatgtttgcaaaagaagttgttataatggacgagtcagaaa  20761000                                               <---------YAB1                                            --------->AHL20(2)                  <-----------TGA1          <---------AHL20(1)                 --------->bZIP60(2)        <---------AHL20(2)        <---------ANAC58   <---------HSFB2a(2)                  <---------ICU4     --------->ATHB12   --------->HSFB2a(2)                  <--------HAHB4     --------->YAB1                         --- <---------AHL20(2)                    <---------ATHB12   <---------ATHB12                        --- ----->AHL20(2)  --------->ANAC58--------->ANAC58 <---------YAB1>>>>>>>>>>WRKY63  --------->ANAC46--- ----->ICU4      --------->ANAC58--------->ANAC58<---------AHL20(2)   <---------ANAC58     <---------   tatttatagaaaaactgaaacgtcattaatcttccaagcccatcattttatttttattctatcatttgactatcgtgctactataagtcatttgatgtac  20761100            --------->CCA1(2)     <--------HAHB4     -------->ATHB1     <---------AHL20(2)     --------->AHL20(2)     <---------ICU4     --------->ATHB12     --------->ATHB51            ------>MYB83    --------->ICU4               ------>MYB46(1)    <---------ATHB12           <---------MYB59    <---------ATHB51          =======================================================================  --------->WOX13(1)          ----------------->AG                                        ----------- ------>ANAC46           --------->YAB1                            <---------SPL7       --------->YAB1 ------>ANAC58           <---------ICU4                           <---------MYB46(3)  ------->TEIL--- ------>ANAC58          <---------ATHB12           --------->AHL20(2)              <---------YAB1 <-- ------AtSPL8      <------ZmHOX2a(2) ----------->GT1    ---------->DOF2          --------->YAB1   <--   aagtcaattatttgatatgagatcaaatcataaccaaattggtttatataagaaaaaataaagtttagtcgttcgagttagtatcatgaatcatgtataa  20761200                                                                                      ===============                                                                                      <--------------                                                                             --------->DAG2                         --------------->AGL15                              ---------->DOF2              --------->MYB46(3)      <---------GLK1(2)              --------->HSFB2a(2)            - ========================================MADS_MADS                   <---------HSFB2a(2)  --------->YAB1 >GT1    --------->ANAC46<---------------AGL15                <---------AHL20(2)      --------------- ------>AHL20(1)        ============================================================================= -------AHL20(1)        ----------------->AGL3               <---------AHL20(2)      ---------------- -------AHL20(2)        ----------------->AGL2               --------->AHL20(2)      ================   tatatgactagactcaacaactattctccaaaattagcaaaattctcaaaaaaaacttagaaattttttttttagaaaaaaagtttcaccaaaaatagcg  20761300                            ----------->RAV1(1)                           ----------->HVH21                           --------->ANAC58                           --------->ANAC58                  ------>ZmHOX2a(1)                 <---------------AGL15                 --------------->AGL15                ----------------->AGL1                <-----------------AGL1                ----------------->AG             --------->KAN4(2)            <----------TaMYB80         <---------ANAC58 ================================MADS_MADS                       ----------->GT1 -AGL15     --------->KAN4(1)          <---------ANAC58        ----------->GT1 ---------->GT1 ===================================================================================== >AGL15     <---------KAN4(1)    <------ZmHOX2a(1)      ---------->DOF2 ================================MADS_MADS            <---------MYB59       <------ZmHOX2a(1) ->AGL3 --------->AHL20(2) --------->ETT(2)   ---------->DOF2 <-----------------------TaNAC69(2) =================================MADS_MADS <---------YAB1   --------->CCA1(2)   ----------->GT1    -   agaggtcaaattgaatattcctaatatggacgacaggaagagcgtgatgaaagggacctaaagaaacgagaaaaatcaggaaactgtttattcgattaag  20761400                                                                      ----------->GT1                                                                      <----------ID1                                                             --------->AHL20(2)                                                             <---------AHL20(2)              <---------TOE2(3)                        --------->ANAC55(2)             <-----------GT1                           --------->ANAC55(1) --------->AHL20(2)              *TSS                  <---------ANAC55(2)                    <------ ==============================MADS_MADS               --------->ANAC46                     --------- ---------->TBP<---------------AGL15 ------------------------>ANAC81---------->DOF2      <-----------GT1   ctataaaatgtcatttaacatttgaagaaaaaaatcgaaattcaaacaaaaaaaaacacataataaaacaaaaagaaaaaaaaaacattttttccaacac  20761500                                                                                  <---------AtLEC2                                                                                  <---------ANAC58                                                                                  <---------ANAC46 <-                                                                                  <---------ANAC58<--                                                                             <----------DOF2  ------>NtERF2                                                                        --------->ALFIN1     --------   ----------->GT1            ---------->DOF2                         <---------ANAC46       -------- ---------->DOF2        --------->YAB1      <---------TOE2(3)  <----------DOF2<----------DOF2-------- ---ALFIN1        <----------DOF2     <---------YAB1--------->ALFIN1  <---------ANAC58    --------->O2 -->RAV1(1)--------->YAB1  --------->YAB1<---------YAB1----------->GT1<---------ANAC58    <---------DEAR3(1)   ttgaaaagaaaaatcataaactttactaataataaagtttactattaatgaagggaggggttaaacttttggccgtgtgcctttgcgtggccacggcgac  20761600                                                      --------->ANAC58                                                      --------->ANAC46                                                      <---------ANAC55(2)                                                      --------->ANAC58                                                     <-------TEIL                                                     <---------LBD16                                               ----------->HVH21<---------At4g35610                                             <---------ANAC55(2)<---------GLK1(1)                                             --------->ANAC55(2)--------->GLK1(1)                                        --------->ALFIN1       ------->TEIL                                     ------->MYC2    --------->SPL7                                     <-------MYC2    --------->SPL1(2)                                     <-------MYC3 <---------ANAC46                                     ------->MYC4 <---------ANAC55(2)                                     <-------MYC4 <---------ANAC58                                     ------->MYC3--------------->AtSPL3                                     <-------PIF5<-----------------------TaNAC69(2)                                     ------->PIF5<---------------AtSPL3                                    --------->O2<---------TGA2(2)                                    <---------TGA1a  ------->TEIL                      --------->ANAC46   <---------ICU4                   <---------ANAC55(2)  --------->ARR14(2)       --------->ANAC46  <---------YAB1                    <---------ANAC46--------->SPL1(1)           <---------HSFB2a(2)  --------->ICU4                    --------->TGA1a<---------SPL7           <---------SPL7 --------MYB52(1)                 <---------ALFIN1<---------ANAC58   ------>ZmHOX2a(1) --------->ANAC58 -------RAP2.6(3)                 <------------OsbHLH66  <---------ARR14(2)<---------ANAC58    ------ ->DEAR3(1)             <---------MYB52(1)   --------->TGA1a   <-----------ARR10--------->HSFB2a(2) - --->HVH21          <---------ARR14(2)--------->ALFIN1--------->ANAC55(2)  <---------ANAC58   ------- ->ETT(2)          <------ZmHOX2a(1)<---------O2<------------------SPL14  <------NtERF2--------->ANAC58   cgtcatgatggtccaagcggaggacccttacttccaccacgtgtggaacgtgacgtacggaaccgcatctcctctcggcgttccacaacaagtcatcctc  20761700                                                            --------->ARR11(3)                                                         <---------DOF5.7(2)      <---------WRKY38(1)                              <---------MYB52(1)      <---------WRKY12                                 --------->DOF5.7(2)     --------->WRKY18(1)                              --------->TOE2(3)                           <--    --------->At5g28300                          --------->TGA2(2)                               ----    <-----------HVH21   --------->TOE2(3)       <-----------HVH21       --------->TOE2(3) <----------   ------->GAMYB    ------>ZmHOX2a(1)           <-----------TGA1      -------->P------->TEIL  ------- >ZmHOX2a(1)<---------LBD16                    --------->ANAC46      ------->GAMYB<---------DAG2 ---- -------->MYB52(1) <---------MYB59             --------->bZIP60(2)  --------->MYB46(3)   <---------ICU4 -->TOE2(3) ----------->RAV1(2)               <-----------STF1      <---------MYB111(2) ------>ZmHOX2a(1)   atcaacggtcaattccctggtcctaacatcaactcgacttctaacaacaacgtcatcgttaatgtcttcaacaacctcgacgagcctttcctcatcacct  20761800                                                                 --------->CCA1(2)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                   --------------->AGL15      <---------ARR14(2)                           <---------------AGL15      --------->ARR14(2)                          ===================================================     <---------GLK1(1)                            ----------------->AGL2     --------->GLK1(1)                            <-----------------AGL2     <---------CCA1(2)                            ----------------->AGL3 --------->ANAC58                                 <-----------------AGL3 <---------ICU4           --- --------->ANAC58            --------->TOE2(3)   -------->P     --------->ARR14(2)             <----- -------SPL7 <---------AHL20(1)              --------->ANAC46   <---------ARR14(2)          --------- ----->TOE1(1)       --------->ANAC46        --------->ANAC58 <------MYB83                  <-------- -HVH21      --------->ARR11(3)       <---------AHL20(2)    <--------P  --------->ICU4      <-------- ---->RAV1(2)<---------ARR11(3)      --------->AHL20(2)   --------->ATHB12         ------->GAMYB  <-- ----->TOE2(1)       --------->MYB46(3)      --------->ANAC58 <------MYB46(1)   --------->MYB52(1)<--   ggtacgcatatctgatatattccacgaccattcttaaaattttatacgagcaaccatatatggttggatatgaaattatgtccaacggtaccaatatttt  20761900  Previous    Next  AGI:  At1g55570.1    Description:  SKS12 (SKU5 Similar 12); copper ion binding / oxidoreductase. similar to SKS14 (SKU5 Similar 14), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G55560.1); similar to SKS13 (SKU5 Similar 13), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G13400.1); similar to SKS11 (SKU5 Similar 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G13390.1); similar to Bplo [Brassica napus] (GB:CAA47177.1); similar to L-ascorbate oxidase homolog precursor (GB:Q00624); similar to Bplo [Brassica napus] (GB:CAA47178.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); conta Range:  from: 20761433    to: 20763742    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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