Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ANAC46                                     <-------TEIL                                    --------->CCA1(2)                                   --------->ARR14(2)                                   <---------ARR14(2)                                  <------ZmHOX2a(1)                               <-----------RAV1(2)                              --------->TGA2(2)                            --------->ANAC58                            --------->bZIP60(2)                            <---------TGA1a                            --------->ANAC58                            ===============================bZIP_DOF                            --------->O2                            --------->TGA1a                            --------->ANAC55(1)                            --------->ANAC46                        <---------ALFIN1               --------->DAG2<-----------HVH21        =================================HOX2a_HOX2a                                                <        <------ZmHOX2a(2)   <---------O2                     --------->AHL20(2)                  <---       <---------ARR11(3) <---------ALFIN1                   <---------AHL20(2)            --------->ARR14(2) -------->GT1 ========================bZIP_DOF  ---------->DOF2                            --------->GLK1(2) --->GLK1(2)  ---------->DOF2<-----------TGA1   --------->MYB52(1)   <---------REM1(2)     <---------ARR14(2)   ctgtaaatagatcacaaaaagtagagccacacgtcaggatacaccataaataaaggagtgcatataaattcttcacagtttaatatactagagaatatgt  20741300       --------->ALFIN1       <---------MYB52(1)      <-----------HVH21     <---------ANAC58     <---------ANAC58     <---------ANAC46                         <---------At5g28300   <---------At5g28300                       <-----------GT1 --------->ARR14(2)                       <---------ICU4                               <-----------HVH21 <---------ARR14(2)                 --------->AtLEC2                      ------>ZmHOX2a(1)        -- ----------TaMYB80            <---------ARR11(3)                       ------>ZmHOX2a(1)    <-------- ----TEIL                     --------->ARR11(3)           <---------GLK1(2)       <---------LBD16<--   gcatataccgtgagggctagtactgagtcaaagatttcatacaaaaattaccctgtctagtgattctcttctcctcctagcagtttcagggtcagaattt  20741400                                            --------->LBD16                        <---------WRKY18(1) <---------LBD16                     <---------ANAC58      <---------ANAC46                                       <--                     <---------ANAC58      <---------ANAC58                                      <---               <---------bZIP60(2)         <---------ANAC58                                      ----            ----------->HVH21          <---------ANAC58                                          <---      --------->At4g35610              <---------ANAC58                                 <-----------GT1      <---------At4g35610  <---------MYB46(3)                                      ------->TEIL  ---- ------->YAB1 <---------TOE2(3)      <---------YAB1                              <-------TEIL   <---- -GLK1(2)  <---------WOX13(1)    <---------WOX13(1)                     --------->At4g35610    <----- -------YAB1----------->TGA1<-------GAMYB <---------LBD16               <---------At4g35610 <--------   ttcatagcagatgactgacgttgtcttgactgttgatttatacttgcggggatagaagagagtaataggttttttgctgaagatgcatttttagctttta  20741500          --------->ZAT2          <---------ZAT2  <---------At4g35610 <---------ARR14(2) ------->TEIL ---------->DOF2 --------->ARR14(2)               =============================HOX2a_HOX2a -------------AGL15               ------>ZmHOX2a(2) --------------AGL1              ==============================HOX2a_HOX2a ------------->AGL1              <------ZmHOX2a(2) --------------AGL2 --------->HSFC1(2)           --------->MYB46(3)          --------->At4g35610 ------------->AG   <---------HSFC1(2)      --------->HSFB2a(2)              <---------At4g35610 -----At5g28300     <---------HSFB2a(1)     <---------HSFB2a(2)     <----------DOF2 ------GT1--------->At4g35610   <---------ARR14(2)      ------>ZmHOX2a(1)  <-----------RAV1(2) --DOF2   <---------At4g35610   --------->ARR14(2)    ----------->RAV1(2)<-----------GT1          <--   ccgcatctggtgagctgaaagaagcatcgtaagggatcccaattgtctcgaacaactcctgcttcacattcttttttacaggtgaatcgattttcaaata  20741600                                                                                        =============                                                                                        <---------TGA1a                                                                                        --------->TGA1a                                                                                        --------->ANAC46                                                                                        --------->ANAC55(1)                                                                                        --------->ANAC58                                                                                        <---------O2                                       --------->RAP2.6(2)                              --------->ANAC58                                     --------->ZAT2                                     =============                                     --------->At4g35610                                =============                                     <---------ZAT2                                     --------->O2                                     <---------At4g35610                                =============                                    ----------->RAV1(1)                               <---------ALFIN1                                  <---------At4g35610                                 *TSS                                  <---------ZAT2                                   <---------ZAT18                                  --------->ZAT2                <---------YAB1     --------->ZAT18                                  --------->At4g35610      <---------ZAT6 --------->REM1(2) ---------HVH21                 ---------->CDC5    --------->GLK1(1)     ----------->HVH21       ----   tgtcatttgttttgagagacactcagagagttgctcagcagcagccaattgggaactcattgtgttatgaaggctgtgaagggattgcacacgtctgcaa  20741700        ------------>CBF        ------->GAMYB      -------->P                                                                 --------->AHL20(2) ===============MYC_MYB                                          <---------AtMYB61       <-----------GT1 ==============MYC_MYB      --------->DAG2                <---------ANAC58     ====================== =======bZIP_DOF           --------->DAG2    ------>MYB83 <---------ANAC46     ------>ZmHOX2a(1) =======bZIP_DOF          ---------->DOF2    ------>MYB46(1)  <---------YAB1  --------->TOE2(3)    -- ------>DOF2       ----------->GT1      <-----------GT1   <---------ANAC58    --------->TOE1(3)    ==   aaagaatcaacccaatatgagttgcaaaaaaaggggacgttttgaccaacttatagtatttcttgtgatggtgttttcttccttaaaattttcacaactg  20741800                                                                    ------>ZmHOX2a(1)                                                                    <---------YAB1                                                                   --------->TOE2(3)                                                                 ------>MYB46(1)                                                                 ------>MYB83                                                               <---------ALFIN1                       ----------------------->TaNAC69(2)  --------->ZAT18                     --------->ATERF1(1)           <-----------RAV1(2)                    --------->At4g35610          ----------->RAV1(1)===================HOX2a_HOX2a           --------->TOE2(3)                <---------ANAC58   --------->AtMYB61         --------->ARR11(3)         --------->ANAC58    --------->GLK1(1)                        <--- =====HOX2a_HOX2a   <---------At4g35610     <---------ANAC58  --------->MYB46(3)       ---------->DOF2 ---->ZmHOX2a(2)  <------ZmHOX2a(1) --------->ANAC58  =================================HOX2a_HOX2a ========================HOX2a_HOX2a--------->ANAC46  <------ZmHOX2a(1)         <------ZmHOX2a(2)----   atccaatagaataccttgaaggagcagacctatttggcacgcctcttcgtgccacaggatgtccaccatcctcattgtagcgatcgagttcaagccgatt  20741900                                                                               --------->DAG2                                                                              ---------->DOF2                                                                            --------------->AGL15                                     --------------->AGL15                  <---------------AGL15                                     --------->HSFB2a(2)                   <-----------------AGL3                                     <---------HSFB2a(2)                   ----------------->AGL2                                     ------>ZmHOX2a(1)                     ----------------->AGL3                                     <---------------AGL15                 ==========================  <---------ARR11(3)                 ========================================================MADS_MADS  --------->ARR11(3)                 ================================================================ --------->CCA1(1)  --------->At4g35610                                   <---------At4g35610 --------->RVE1(1)  <---------At4g35610                                   --------->At4g35610 ------AHL20(2)  <---------ATHB12<---------ARR14(2)                     <---------ZAT18 ----->AHL20(2)--------->WOX13(1)--------->ARR14(2)                  ------->GAMYB    --------->MYB52(1)   aaaatatctctctagttcaatcagttgatgagtcaaatcctagaatgagaaaaatagaagataaatgacaacagcgagctaaaagtagtaacagatggat  20742000                                                                                                  ===                                                                                                  ---                                                                                                 <---                         --------->TOE1(3)                                                       <---                         ============================================================================               --------->ANAC55(1)                                                    --------->ARR14(2)               --------->ANAC58                                                     <---------DEAR3(2)               --------->ANAC58                                                     <---------MYB46(3)               ----------->GT1                                                     <---------DEAR3(1)               --------->ANAC55(2)           --------->At4g35610                   <---------DREB2C(2)               --------->ANAC46<---------AHL20(2)                                  <---------ANAC58               <---------ANAC55(2)  <-------TEIL------>NtERF2                      <---------ANAC58     --------->CCA1(2)   --------->TOE2(3)  <-----------RAV1(1)       --------->ARR14(2)         ----    --------->ARR11(3)   --------------->AGL15  <---------At4g35610  <------ZmHOX2a(1)<---------ARR14(2)    <---------ARR11(3)<-----------GT1   --------->AHL20(2)        <-----------RAV1(2)<-------GAMYB<-- ========================================MADS_MADS         <------NtERF2        <-----------RAV1(1) ========================================MADS_MADS ------>NtERF2  ==========================RAV  ----   gagggagatatatcaacacgtaaaaaaccttatttagtttcattatatgctgccgcttggcctcaagctcaggattcaacttctggcggttccaaagttg  20742100                 <---------MYB52(1)             <---------At4g35610             --------->At4g35610 ======================================================================MADS_MADS ------------>AGL15 --------------AGL2                                                                                 - --------------AGL1               ------>MYB46(1)                    <---------ALFIN1          ------ =============MADS_MADS           ------>MYB83                 <---------GLK1(1)            --------- ------------->AGL2  <---------ANAC58                ----------------->AG            --------->YAB1 < -------------AGL15  <---------ANAC46         <----------DOF2  --------->GLK1(1)  --------->YAB1  <-- ------------->AGL1  <---------ANAC58    ------->TEIL----------------->AGL1      <---------ATHB51 ---   ccagtactggttatcagcagtttgcttatacataccttccatgtatgtcttttttgccaaaactgaaatccccacatgaaacaataataagaaaacataa  20742200  Previous    Next  AGI:  At1g55540.1    Description:  EMB1011 (EMBRYO DEFECTIVE 1011). similar to unnamed protein product [Vitis vinifera] (GB:CAO22127.1); contains domain NUCLEAR PORE COMPLEX PROTEIN (NUP) (PTHR23193); contains domain NUCLEAR PORE COMPLEX PROTEIN NUP153 (PTHR23193:SF4) Range:  from: 20738274    to: 20741686    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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