Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ANAC58                                         --------->ANAC58                                         --------->ANAC46         ------>ZmHOX2a(2)               <---------ANAC55(2)         ===================HOX2a_HOX2a  --------->ANAC55(2)        ====================HOX2a_HOX2a <---------LBD16        <------ZmHOX2a(2)              --------->MYB52(1)       <---------ARR14(2)       <---------ANAC58       --------->ARR14(2)      <---------ZAT2     <---------DEAR3(2)        --------->ZAT2                            <---------GLK1(1)    <---------ANAC46     --------->GLK1(2)                               --------->GLK1(1)    --------->ETT(1)     --------->ARR14(2)                            <------ZmHOX2a(1)  <-----------HVH21      --------->MYB52(1)  <---------ZAT2   ----------->GT1                       - --------ANAC58          <---------ARR14(2)  --------->ZAT2  --------->ANAC58                      -- --------ANAC46      <------ZmHOX2a(1)----------->HVH21      --------->ANAC58                 <------ --------ANAC58   <-----------RAV1(2)<-----------HVH21  <---------------AtSPL3    ------->TEIL------- -----TEIL     ----------->HVH21<---------ANAC58  <------ZmHOX2a(1)--------->TOE1(2)       --------->YAB1   ttcgtgtcggatccacagtgacaggagtatcggagcttgagtcacggagctaggagggtatggacggaaactaggaaatcgttgaatctatatgcataat  20726600                                           --------->AHL20(2)                                           <---------AHL20(2)                                          <---------AHL20(2)                                     --------->TOE2(3)  --------->AHL20(2)                 --------->YAB1                     <---------TOE2(3) -------------->AGL15              -------->P <---------AHL20(2)       ---------->DOF2 ------->TOE2(3)                  ------->GAMYB  <-----------GT1      <---------AHL20(2) ---ICU4                         --------->MYB46(3)       <-----------GT1         --------->At5g28300 -->ATHB51           --------->AHL20(2)   --------->AHL20(2)   --------->REM1(1)----------->GT1   ttcttaaaatatgaacaatgagtttatatatgttaacaaccatattaatttatacaggttttactacatcatttaaagtatgagggtaaatgagtatatt  20726700                                                          <---------YAB1                                                         <---------AHL20(2)                                                       <---------YAB1                                          --------->At4g35610                                  --------->AHL20(2) <---------ICU4                                  <---------AHL20(2) --------->YAB1                          --------->At4g35610    --------->AHL20(2)                          <---------At4g35610    <---------AHL20(2)                       -----------        <---------YAB1  --------->YAB1    <---------At4g35610                     --------->ANAC58      --------->YAB1 --------->YAB1    <-------TEIL <---------YAB1                --------->ANAC58 --   ttagacaattacaatttttgtaagaatcatctgcatttaaattcatctgattttattattattttggatgagtatgagtttggcaaaccatatggctaaa  20726800                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                       ------>MYB46(1)                                                                                       --------->AtLEC2                                                                                       ------>MYB83                                                                                     --------->AtMYB61                                                        --------->ZAT18            ------>NtERF2  <---------HSFB2a(2)                      <----------DOF2                      ----------->RAV1(1)  --------->HSFB2a(2)          <---------GLK1(1)        <---------ZAT18        ----------->HVH21 >GT1        <----------DOF2   --------->GLK1(1) <---------DAG2                --------->ANAC46   <-- ------->ARR11(3)<---------AtLEC2  <----------DOF2<----------DOF2   --------->ZAT6--------->REM1(1)   acatctagatgatgtctttgcatttcaatatggatttcttttaggctttagccttttgggccctaatgtaacaccaagtctgcgacaccatccaaaaaat  20726900                                                    --------->O2                                                    <---------bZIP60(2)                                                    <---------ANAC58                                                    --------->TGA1a                                                    <---------ANAC58                        <--------                                              --------->ARR14(2)                       <---------ANAC58                                              <---------ARR14(2)--------->ARR14(2)     --------->ANAC55(2)                                           --------->ETT(1)     <---------ARR11(3)     <---------ANAC55(1)                                           <---------ANAC46     --------->GLK1(2)      <---------ANAC55(2)                                         <-----------HVH21  <------ZmHOX2a(1)          <---------ANAC46                                  --------->ATHB12  <---------ANAC46                   <---------ANAC58                               <------------CBF     <---------O2<---------ARR14(2)<---------ICU4 --------->LBD16             --------->ARR11(3)     <---------TGA1a *TSS       --------->ANAC55(2) ---ICU4                     <---------ARR11(3)  ----------->HVH21 --------->WOX13(1) <-------------- ->AHL20(2)          <---------ANAC58 <---------ANAC58   <-----------RAV1(2)   <---------ANAC55(2) --AHL20(2)          <---------ANAC58 <---------ANAC46--------->ALFIN1--------->YAB1 <-----------GT1 -------At5g28300 --------->TOE1(2)   <---------ANAC58----------->HVH21        ----------->GT1   taccgcgaaaaaaaaaaaaacttgcgagagagatattgattcgtgtcggatttgacgtggcaggagtatctatcatctatctcgtaattacgtgattaac  20727000                                                                  <------MYB46(1)                                                                  <---------ANAC58                           --------->DAG2                         <---------ANAC46                        <---------------AGL15                     <------MYB83                        --------------->AGL15                     <---------ANAC58                        --------->AtMYB61                        <---------MYB46(3)                       ----------------->AGL2                  <---------MYB52(1)                       ----------------->AGL3                 --------->ZAT2                      ----------->RAV1(1)                     <---------ZAT2                      ------>MYB83                         ----------------->AGL1                  --                      ------>MYB46(1)                --------->GLK1(2)                            ---                     --------->ANAC46                --------->ARR11(3)                         <----  --------->GLK1(2) <---------MYB111(2)              <-----------ARR10                       <-------  --------->ARR14(2)--------->DEAR3(1)               <---------ARR11(3)                     <--------  <---------ARR14(2)<---------MYB55(2)              --------->RVE1(1) ---------->DOF2       <-------- <---------GLK1(2) --------->ANAC46            --------->TOE2(3) --------->MYB55(2)     <---------ANAC58 -WOX13(1) <----------DOF2---------->DOF2    ------>NtERF2-------->P----------->HVH21   <---------ANAC58 ---------TaNAC69(2)--------->MYB46(3)--------->TOE2(3)  <-----------GT1              --------->ARR11(3)   ttagaatctgtttctttcttcacccaccaaaagtagcaaacctttgccacctaaaaatcttaccagttgggtgaaagttgccaaaatagagcttgctttt  20727100                                                                --------->ARR14(2)                                                                --------->ARR14(3)                                                                <---------ARR14(3)                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                                <---------ARR14(2)                                                      <----------DOF2                                                   <-----------------AGL1                                                  <------NtERF2--------->GLK1(1)                                                 ------>NtERF2----------->ARR10                                                 <<<<<<<<<AtERF-5                                                 <<<<<<<<<AtERF-7                                                 <---------ATERF1(1)                                                 <---------ERF1<---------At4g35610                                                 <<<<<<<<<AtERF-3         --------->ARR14(2)                                                 <---------RRTF1(1)       <---------ARR14(2)                                                 <<<<<<<<<AtERF-1        <------NtERF2                                                 <<<<<<<<<AtERF-2       --------->LBD16                                                 <<<<<<<<<AtERF-4<------ZmHOX2a(2)                                                 <---------RAP2.3(1)   --------->HSFB2a(2)                                 <------MYB46(1)<---------ANAC58<-----------ARR10                                 <------MYB83   <---------RRTF1(3)     --------->ATERF1(2)          -                                <---------MYB46(3)--------->ATERF1(1)  <---------ATERF1(2)          -                               <---------ANAC46 <---------ATERF1(2)    <---------HSFB2a(2)          -                             <---------MYB46(3) <---------DEAR3(1)     --------->RAP2.6(2)          <                             <------MYB46(1)    <---------ANAC46<---------GLK1(2)                   -       ------>ZmHOX2a(1)     <------MYB83       <---------ANAC58--------->AGP1                     <- ------->ETT(1)             <---------AtMYB61   <---------RRTF1(2)     <---------ANAC46           --- ------->ID1             <---------MYB46(3)     <---------RAP2.6(2)    --------->LBD16           ---- -------RAV1(1)          <-----------RAV1(1)    <---------RAP2.3(2)   <---------LBD16           <---- ---DOF2                <---------WOX13(1)      <---------DREB2C(2)  --------->MYB52(1)   --------->ZAT2 -ANAC58              --------->ATHB12          <---------RAP2.3(3) ------>ZmHOX2a(1)     <---------ZAT2 -ANAC58            <---------WOX13(1)         --------->RAP2.6(3)------>ZmHOX2a(2)     --------->LBD16   gtcgcaatcctatatttttcagattgattgttggtgggtttgtgtaaatggcggctcttttaggcagatcctgccggaaactgagttttccgagcttgag  20727200         <------ZmHOX2a(1)    --------->ZAT2    <---------ZAT2 -------->ANAC58 -------->ANAC46                                                                                    - -------->ANAC55(2)                                                                                 < ---------ANAC55(2)    <---------ARR14(2)                               --------->ANAC46     ------>ZmHOX2a(1) -------->ANAC58    --------->ANAC46                                <-----------HVH21     <------ZmHOX2a(2) --------LBD16     <---------LBD16                                  <----------DOF2      <---------ARR14(2) ------>MYB52(1) --------->ETT(2)                            ---------->DOF2             --------->ARR14(2) ------->HVH21 <---------ARR14(2)                           <---------ATHB12             <---------GLK1(2) -------HVH21  --------->ARR14(2)        ------->TEIL     --------->WOX13(1)  <----------DOF2========   tcacggagctaggagggtatcgacggaaactggaaaaccattgaatctatactctgctattaatcaagcgcttcacatcgctttggacaccgatcctcgg  20727300                         ----------->GT1                        <---------TOE2(3)                                                    --------                      ------>ZmHOX2a(1)                                                  <---------ICU4     --------->ZAT6   <---------MYB52(1)                                --------->ALFIN1--------->ICU4 -------->At4g35610  --------->TOE2(3)                     ----------->GT1           <---------AHL20(2) ---------At4g35610 ------>ZmHOX2a(2)                     ----------->GT1         ----------->GT1 ==========================HOX2a_HOX2a           <---------ANAC46 --------->AHL20(2) --------->AHL20(2)   taagcttacactagacatttgatccttaggttaatagacatctaatacattctgtggagaaagataaaaaaaatgtggggaatttagttaattagtatac  20727400                                                                <---------ARR11(3)                                                               <------MYB46(1)                 <-----                           <---------ANAC46                    <------MYB83                   <------                           <---------ANAC58                   <---------AtMYB61            <---------ANAC58        <---------ANAC58   <---------ANAC58          <-----------RAV1(1)     <---------LBD16<--------        <---------ANAC58<---------bZIP60(1)    <---------TOE2(3)--------->ARR11(3)     <---------MYB52(1) ->ZAT14<---------ANAC46--------->bZIP60(1)<----------DOF2<---------ANAC46<----------DOF2  <---------ANAC58   acatatagttgcttcaaatatgtatgatgtcgttttagagtctgactttaagtttttgttgtgggaggtcttatgtctttggggaagacgttggctttgg  20727500  Previous    Next  AGI:  At1g55510.1    Description:  BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring). similar to DIN4 (DARK INDUCIBLE 4), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Arabidopsis thaliana] (TAIR:AT3G13450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22118.1); contains InterPro domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; (InterPro:IPR009014); contains InterPro domain Transketolase C-terminal-like; (InterPro:IPR015941); contains InterPro domain Transketolase, central region (InterPro:IPR005475); contains Range:  from: 20726968    to: 20729334    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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