Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->AtMYB61                --------->YAB1                                     <---------ALFIN1             <---------ICU4                                       ------>MYB83             --------->YAB1                                       -------->P            <---------YAB1                                       ----------->RAV1(1)          <---------ICU4                                        --------->AtMYB61     --------->YAB1          --------->YAB1                                  ------>ZmHOX2a(2)          --------->ZAT6         <---------YAB1                                  <------ZmHOX2a(2)      --------->TOE2(3)       --------->YAB1                --------->ANAC46   <---------ARR11(3)     --------->ATHB12       <---------ICU4            ------>MYB83           <---------ARR14(3)     --------->YAB1      <---------YAB1             ------>MYB46(1)        <---------ARR14(2)     <--------HAHB4    <---------ICU4       --------->AtMYB61              --------->ARR14(2)     <---------ICU4    --------->YAB1    <---------ALFIN1      <-----------HVH21  --------->MYB46(3)   <---------TOE2(3)   <---------YAB1    --------->MYB46(3)<---------ATHB12 --------->ARR11(3)    --------->ICU4 --------->YAB1 <---------ICU4 <---------ALFIN1         --------->ARR14(3)    <---------YAB1 <---------ICU4<---------YAB1  --------->AtMYB61 --------->AtMYB61------>MYB46(1)  --------->YAB1 ---   aaatcatcatcatcatcatcatcaccaccatcaccatccccatcactgtcaccatcacgatcttcaccaacaccatcaccatcattaacaataacatcat  20686300                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <------NtERF2                                                                                         <------NtERF2                                                                                         --------->ATERF1(1)                                                                                        <---------ATERF1(1)                                                                                        --------->LBD16                                                          --------->MYB52(2)           <----------CDC5                                                        <---------MYB52(1)             <------NtERF2<                                                       --------->TOE2(3)              --------->At4g35610                                 --------->DEAR3(1)    <-----------HVH21              ------>NtERF2<-                                <------NtERF2          <-----------TGA1    <----------DOF2 <---------ATERF1(1)                               ------>NtERF2       <---------ICU4         ------>ZmHOX2a(2)------>NtERF2                              <---------ALFIN1    <---------YAB1        <---------ARR11(3)<---------ARR14(2)                        <---------ICU4          <---------ICU4          --------->ARR11(3)--------->ARR14(2)                       --------->ICU4           --------->YAB1      <-----------GT1   <---------LBD16                       <---------YAB1          --------->ICU4  <---------ANAC58       --------->LBD16                     <---------ICU4            <---------YAB1  <---------ANAC58      --------->DEAR3(1) ------>TOE2(3)      --------->YAB1          --------->YAB1    <---------ANAC46     --------->ATERF1(1)   cgtcaacaaaattgttatcttcatcatcatggccaccgtcttcagagtcatcatcatcgtcagtttcgtttatcgatctttctgaagccgcggagccgtc  20686400       <---------ANAC58       <---------ANAC46       <---------LBD16       <---------ANAC58      <---------LBD16 ----NtERF2 -----DEAR3(1) --->ATERF1(1) -NtERF2--------->LBD16 -----HVH21  --------->ARR11(3)                                                                <----- ---RAP2.6(3)--------->ARR14(2)                                                             <-------- ->DEAR3(1)  <---------ARR14(2)                                                           --------->DEAR3(1) ->RAP2.3(2) <---------ARR11(3)                                                   <---------ANAC58 >ATERF1(1) <---------GLK1(1)                --------->At4g35610                  <---------ANAC58 <- >DEAR3(2)  <---------CCA1(2)              <------ZmHOX2a(1)               --------->DAG2 <---------DEAR3(1) >RAP2.3(1) --------->GLK1(1)          <--------P                   <---------ANAC46      <---------ATERF1(2) ---------DEAR3(2)                  --------->ALFIN1                ----------->GT1    <-----------GT1 --------TOE1(2)                <-----------RAV1(2)       --------->DAG2 ---------->DOF2 <---------LBD16   gtcggtattgcggggtatcttagaaatatcaaaaccaggtggtaaggagatgagggtgagaaggtgagaggggtgaaaagggtgtcttatcaccggcgga  20686500                                                                                      ---------->DOF2                                                                                   --------->ANAC58                                                                                   --------->ANAC46   ----------->HVH21                                                               --------->ANAC58 --------->At4g35610                                  <----------DOF2            <---------AtLEC2 -NtERF2                                        --------------->AtSPL8 <---------ANAC58 -LBD16            <---------GLK1(1)            <---------------AtSPL8 <---------ANAC58--------->DAG2 -----ZmHOX2a(1)   --------->GLK1(1)       --------->YAB1 <-----------GT1    <----------DOF2     ----   aggaggtgacagcctctgtggaattctaacttgcaagtagcacaatagtaatagtactttctaccctctaaatgcttgcctttgcacgaaaagcagatag  20686600                            <------NtERF2                           ------>NtERF2                           --------->RAP2.6(2)                          <---------DEAR3(1)                          --------->ATERF1(2)                         --------->ATERF1(1)                        <---------ATERF1(1)                        ------>NtERF2                        --------->LBD16                       <---------DEAR3(1)                    <---------ARR14(2)                    --------->ARR14(2)                   --------->ATERF1(1)<---------ANAC58        --------->ANAC58                  <---------ATERF1(1) <-----------RAV1(1)     --------->ANAC46              ------>ZmHOX2a(2)   <---------ANAC58   <------ZmHOX2a(2)        <---------MYB52(1)<---------ATERF1(2)       --------->ARR14(2)       <-----------HVH21<---------RAP2.3(1)         <---------ARR14(2)            ----------->GT1 <--  --------->WRKY38(1) <---------LBD16 <---------ANAC46        --------->ANAC58  <-------TEIL  -------  --------->ZAT18 ------>NtERF2   <---------ANAC58--------->LBD16              --------->CCA1(2)  ---  --------->WRKY12<-----------HVH21   <---------ANAC58      --------->MYB52(1)<---------ARR14(2) ---- --------->ALFIN1--------->DEAR3(1)   --------->ALFIN1------>ZmHOX2a(2)       --------->ARR14(2) <--- ------>DOF2 <------ZmHOX2a(2)---------->DOF2   <---------LBD16           <-------TEIL       <------ZmHOX2a(1)   aaagtggaccgtgagatcgccgtctccggcggcaaagcttgtgtggctgagccggatcggacaaacgacattggggttcagatacagaaaaataaggagg  20686700 -------MYB46(3) -->ALFIN1 -------->GT1                   --------->ANAC58                              --------->ANAC58 ----->ALFIN1                   --------->ANAC58          <---------AHL20(2)  --------->ANAC58 ------AtMYB61           <---------TOE2(3)      ----------->GT1     ------>ZmHOX2a(1)               <   tggtttcatatttgtttgtttggaatgaaggaagaagcaaatgagagagaatgtataaatttttatgctccttctagcccaagtcaaactactcgagtct  20686800                                  <------ZmHOX2a(1)                                 <----------ID1                                               -------                       --------->At4g35610                   ------------>CBF              <---------AHL20(2)             <----------DOF2    --------->MYB59            --------->ANAC58                ----------      <-----------GT1  <---------At4g35610                 --------->ANAC58              <-----------    <-----------GT1    --------->ZAT2              <---------ANAC58                    --------->AHL20(2) ----------DOF2        <---------ZAT2              <---------ANAC58                  <---------ARR11(3)   ctcttttttctctctcttttaatccagctgtagttaggacaaaactattccaggcttgcgctagccaatagccataaactaaaacaagattatataaaaa  20686900                                                                                      <----------DOF2                                                                                  <---------MYB52(1)                                                                                 <---------At4g35610                                                                              xxxxxxxxxxxxxxxx>smallRNA(i)                                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                 <---------At5g28300 <---------ANAC58                                                         <---------YAB1    <----------DOF2                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       --------->CCA1(2)   xxxxxxxxxxxxxxxx>smallRNA(i)                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---                                                      --------->ARR11(3)  <xxxxxxxxxxxxxxxxsmallRNA(i)                                               --------->DAG2   <-----------GT1  <-------GAMYB   <---                                      <---------AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i) <---------ANAC58 --->DOF2                         <---------YAB1      <---------ARR11(3) ---------->ID1          ---- ->TBP                     <------------CBF   ---------->DOF2 xxxxxxxxxxxxxxxx>smallRNA(i)   xxxxxxxx ----AGL15            ---------->DOF2<---------YAB1 ----------->ARR10<---------MYB52(1) <xxxxxxxxxxxx   gaaattttcatataagtggatgaaaaaagaattgtttttattatttgttaaagtgagatatgattttcaccgtttgtcttttcagttgctttagaccaaa  20687000                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          --------->ANAC46                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        --------->ANAC46                        --------->ANAC58                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        --------->ANAC58                      --------->AtMYB61                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     --------->MYB46(3)                   --------->ANAC46                   ------>MYB46(1)                   ------>MYB83                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 ------->GAMYB                 <---------MYB59                 --------->AtMYB61                --------->MYB46(3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <------ZmHOX2a(1)  <---------ALFIN1         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------AHL20(1)--------->ANAC58 ------ARR11(3)--------->ANAC58                    <-----------RAV1(1) ----->AHL20(1)-------->Pxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               --------- xxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(i)                           ---------->DOF2 xxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              ------------------------>ANAC81   atattcttaataggagcaaccaaaccacacaacacttgatttcggtttagtttatgtggttcagttttgagaaaaaaaaaaaaactgaaacaaagaaatt  20687100                                                                                                    x                                                                                                  xxx                                                                                           xxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                           ------>ZmHOX2a(1)   <xxxxx         ---------->DOF2                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    >>>>>>>>>TBF1      ----------->GT1        ---------->DOF2        <---------ALFIN1<xxxxxxxxxxxxxxx >>>>>>>>>TBF1      --------->CCA1(2)    ----------->GT1     <-------TEIL <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) >ARR11(3)     ---------->DOF2   <---------HSFB2a(2)  ----------->GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   gaagaagaagaaaaagagaaagagacggagaaattcgagagagaagtagaaagaagttgaaaattcattatccactccttcatatttcgacatctctcca  20687200  Previous    Next  AGI:  At1g55390.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55380.1); similar to EDA11 (embryo sac development arrest 11), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G55420.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G42280.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 20684542    to: 20686709    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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