Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ICU4                                                                      --------->YAB1             --------->ATHB12                    --------->YAB1      <---------YAB1             <--------HAHB4                --------->YAB1          <---------ICU4             --------->ATHB51             --------->At4g35610      --------->YAB1             <---------ICU4             --------->YAB1            <---------YAB1            --------->ICU4              <---------ICU4          --------->YAB1          --------->YAB1               --------->ICU4          --------->ICU4          <--------HAHB4           <-----------TGA1         <------NtERF2          <---------ICU4          --------->ETT(2)         ------>NtERF2         <---------YAB1           --------->bZIP60(1)     <---------ETT(2)         --------->ICU4           <---------bZIP60(1)     --------->ETT(2)                      <----      <------NtERF2     <---------YAB1 <---------YAB1  <-----------RAV1(1)                      <---- ------>DOF2<---------YAB1       ---------->ID1--------->GLK1(2)<---------ICU4                 ------   aaagaggcaccatcattattagcatcaaaattgttgtcgtcatcatcagaatcagaactgtcgccatcatcatcatcaccatcgtcttcacattcttcct  20681900                                                                         --------->TOE2(3)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                 --------->At4g35610   <---------ARR11(3)                              <---------GLK1(2)<------ZmHOX2a(1)      <---------CCA1(2)                  <---------ICU4      <---------At4g35610             <---------GLK1(1)                 <---------YAB1       --------->At4g35610  <-----------------AGL3              ------ -----DAG2       --------->ICU4 <-------TEIL --------->ALFIN1 <---------DAG2      --------->TOE2(3) - ------DOF2---------->ID1     <---------ARR14(2) --------->ZAT2     <---------ANAC58         <------ZmHOX2a(1) --->TOE2(3) <-----------TGA1 --------->ARR14(2) <---------At4g35610<---------ANAC58       <---------TOE2(3)   ttatcgatttttcgtcgtcatcatcgtcttcagattcgtctgatgaagaggagctgtccatccaatttttgggtatcttagtaacatcaaatttaggaag  20682000                   <---------DEAR3(1)               --------->LBD16                   --------->ALFIN1                 ------>NtERF2        <---------REM1(1)                           ----------->RAV1(1)      --------->At4g35610                    <---------CCA1(2)  ----------->HVH21    <------ZmHOX2a(1)        <------ZmHOX2a(1)     --------->ANAC46 ----->GT1      --------->ALFIN1      <------ZmHOX2a(1)  ---------->DOF2        <---------GLK1(1) -------->ICU4--------->ALFIN1    ---------->DOF2 <---------LBD16               --------->GLK1(1)   taataaggagatgaaggtgagggggtgagaaggatgaaaaggatgtcttatctccggcagaaagatgtgacagcctctatggaattccaaattgcaagta  20682100                --------->ATHB12                -------->ATHB1                --------->ATHB51                                                           ----------                <---------ICU4                                                           <------NtERF2               --------->ICU4                                                           <---------DEAR3(2)               <---------ATHB51                                                         ------>NtERF2               <---------YAB1                                                          <---------DEAR3(1)             --------->YAB1                                                           <------NtERF2             <---------ICU4                                                           --------->ATERF1(1)             <--------ATHB1                                                          <---------ATERF1(1)             -------->HAHB4                                                          <---------SPL7             <--------HAHB4                                                          <-----------HVH21             --------->ATHB51                                                        ------>NtERF2            <---------YAB1                                                         <------NtERF2            <---------ATHB51                                                       --------->ATERF1(1)            --------->AHL20(2)                                                     --------->RAP2.3(1)            --------->ICU4                                                        <---------RAP2.3(1)          <---------ICU4                                                          ------>NtERF2          --------->YAB1                                                          <---------ATERF1(1)         --------->ICU4                                                          <---------DEAR3(1)         <---------YAB1                     --------->ANAC58                    <------NtERF2       <---------ICU4                 <----------DOF2                           --------->ATERF1(1)--       --------->YAB1           <---------ANAC58                               <---------ATERF1(1)---      --------->ICU4         <---------WOX13(1)---------->DOF2                 <-----------HVH21  ---      <---------YAB1      <---------AHL20(2)--------->ANAC58       <------ZmHOX2a(1)--------->DEAR3(1)    --------->YAB1  <---------ZAT18 ----------------->AGL1       <---------ANAC46--------->DEAR3(1)<-  --------->At5g28300   <----------DOF2   <---------AtLEC2---------->DOF2     --------->DEAR3(1)  <-- ----------->GT1-------->HAHB4  <---------ANAC58--------->DAG2--------->ALFIN1<---------DEAR3(1)  <--   gcacagtaataataataattattgcgctttaattgcttgcctttgcaagaaaagcagatagaaagtggaggatgagatggccgtcgccgtcggcaaagca  20682200                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)    <----------CDC5    --------->ANAC58                            --------------->AGL15   <---------At4g35610 --------->ANAC46                            <---------------AGL15  <---------PCF2       --------->ANAC58                           ----------------->AG >DOF2   <---------LBD16                                          ----------------->AGL1--------->HSFC1(1) ------->ALFIN1------>ZmHOX2a(2)                                  <-----------------AGL1<---------HSFB2a(2) ---->MYC2    <------ZmHOX2a(2)                                   <-----------------AGL2--------->HSFB2a(2) ---->MYC3   --------->ARR14(2)                                   =================================== ----------RAV1(1)---------->DOF2                             <---------MYB46(3)     --------->ZAT6 -----MYC3   <---------ARR14(2)        --------->ZAT6     --------->ALFIN1      --------->STY1(2)---- -----MYC2 --------->LBD16     <---------TOE2(3)      <------ZmHOX2a(1) <---------ANAC46<---------HSFC1(1)   tgtggggctgagccggatcggaaagacgacatggaggtttagctctagagaaataaggaggtagtggttccatatcgggtatagctagctctagaaaaaa  20682300               <---------MYB46(3)                                                             <------              <--------P                                                                      -------    ----------------->AGL3                                                                    <------    <-------TEIL <---------ANAC46                                                             -------    ------>ZmHOX2a(2)                                                                         <------   <------ZmHOX2a(2)                                                                 --------->YAB1  <---------ARR14(2)                                                                <---------YAB1  --------->ARR14(2)                                 ----------->GT1             --------->ICU4<----- <------ZmHOX2a(1)                                ---------->DOF2             <---------YAB1  ------- =====================MADS_MADS         ----------->GT1                  <---------ICU4    --------->AHL20(2) ------>DOF2 <-------GAMYB---------->DOF2 --------->AHL20(2)       <---------At4g35610   --------->AHL20(2)   aaaggatccatatggggttgtttggaatgaaagaagagaactatgtaaatataaaaggtttcaagtttcaactcataaatacgattatgaaaataatata  20682400      <---------WOX13(1)     <------------CBF    --------->ATHB12   <---------YAB1 <---------ANAC58                                                         --------->ATHB12 <---------AtLEC2                                                         <---------ICU4 <---------ANAC58                                                        --------->ICU4 ---AHL20(2)                                                             <---------ATHB12 -->AHL20(1)                                                             <---------YAB1 ---AHL20(1)                                          --------->YAB1    <---------TOE2(3) -->AHL20(2)                           --------->AHL20(2)              --------->YAB1               - ---ARR11(3)               <---------YAB1<---------YAB1               <---------AHL20(2)            < ----AHL20(2)   <----------DOF2        <---------AHL20(2)            <---------YAB1        <---------AHL20(2) -->ARR11(3)  ------->TEIL<-----------GT1<---------TOE2(3)        --------->ICU4          --------->AHL20(2)   tttgcatgattgaatgaactttacaaattatcagttcttaattaatattagtactattagaactcgtgatttttaatgatttcaaaatgaaattttatga  20682500                                                               ------->MYC2                                                               ------->MYC3                                                               <-------MYC2                                                               <-------MYC3                                                     <-----------HVH21                                                    <---------ANAC58                                                    <---------ANAC58      ------------>CBF              <---------YAB1                  <-----------RAV1(1)      <---------ANAC46          <---         <---------------AtSPL3------------>CBF     <---------ANAC46   <---------ANAC58         ----- -------->ARR14(2)--------->MYB52(2)        <------------CBF  --------->ALFIN1 --------->YAB1   ----- ---------ARR14(2)<---------MYB46(3)--------->AHL20(2)--------->ALFIN1 <---------ANAC58        <-----   gggatactaaactagtacgatagttggcaacttggcaatttcataccattgttggggtgagggcatgtgggtttcgttcaataagcatttgtaaactatt  20682600                          <-------PIF5                          ------->PIF5             ---------->ID1 <---------MYB46(3)       <---------ANAC58  --------->TGA1a                                              ------->GAMYB       <---------ANAC46<---------ANAC58                                             -------->P       <---------ANAC58<---------ANAC46                                           --------->MYB46(3) ------AHL20(2)        <---------ANAC58                       <---------ANAC58  --------->ANAC58 ---->YAB1=========================bZIP_DOF                   <---------ANAC58  --------->ANAC58 ---->AHL20(2)    --------->MYB52(2)                ----------->HVH21      --------->ZAT2 ----YAB1 <----------DOF2<---------TGA1a       <-----------HVH21     <---------ETT(2)--------->MYB46(3)   atataagttgcgcttgtcgctagtggctcgtgggtagcattgaagcatgggtcagtgactcagtgcttctgtctacgagctcgagcaaccgagaacacat  20682700                                                      ------>ZmHOX2a(2)                                                     <---------GLK1(1)                                                     <------ZmHOX2a(2)                                                    --------->ARR11(3)                                                    --------->ARR14(2)                                                    --------->AGP1                                                    <---------AGP1                                                    <---------ARR14(3)                                                    --------->ARR14(3)                                                    <---------ARR14(2)                                                    <---------ARR11(3)                                                   <---------CCA1(2)                           ------                        ----------->GT1 <---------AHL20(2)   ---------->DOF2     --------->ZAT18                        <----------ID1 --------->AHL20(2) --------->TOE2(3)     --------->ALFIN1    -                      ---------->DOF2  --------->YAB1--------->GLK1(1) <---------AHL20(2)      <-----           ----------->RAV1(1)        <---------YAB1<-----------ARR10 --------->AHL20(2)--------->MYB52(2)   tccaaactgaacacaacaaaaaaaaaaagaaaaaaaaactattatataagaccagatctcccttaaagtctatttaatacaagtggacgatagtttcagc  20682800  Previous    Next  AGI:  At1g55380.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55390.1); similar to EDA11 (embryo sac development arrest 11), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G55420.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G42280.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 20680288    to: 20682273    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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