Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ALFIN1                                                                               <-------GAMYB                                                                              <---------DEAR3(2)                                                                             <---------ANAC46                                                                             --------->ETT(1)                                                                             <---------At1g77200                                                                             <---------DEAR4(1)                                                                             <---------DREB2C(2)                                                                             <---------DEAR3(1)                                                                           <-----------HVH21                                                                          ----------->HVH21                                                                          --------->ALFIN1                                                                         <-------MYC3                                                                         ------->MYC3                                                                         <-------MYC2                                                                         <-------MYC4                                                                         ------->MYC2                                                                         ------->MYC4                                                                         ------->PIF5                                                                         <-------PIF5                                                     --------->HSFC1(2) <<<<<<<<<<HY5            ----                                                   --------->ARR14(2)   =============================                                                   <---------ARR14(2)   ===============MYC_MYB  -----                                                --------->ANAC46        <<<<<<<<<<AtMYC2        -----                                                --------->ANAC58        --------->ANAC55(2)     -----                                                --------->ANAC58        <--------ABF1           -----                                              ------>NtERF2             <---------O2           <-----                                             ----------->HVH21          <<<<<<<<<<ABI5         ------                                             <---------O2               --------->TGA1a        ------                                             --------->O2               --------->O2           ------                                             --------->DEAR3(1)         =============================                                          ----------->HVH21      <---------At4g35610          ------>NtERF2   --------->MYB52(1)                 ------>ZmHOX2a(1)          --------->At4g35610    --------->At4g35610 ------->ANAC58                       ----------->RAV1(2)     <---------ATHB12<---------MYB46(3)----- ------->ANAC58                    <------ZmHOX2a(2) <---------HSFC1(2) <---------TGA1a <---------At4g35610 ----HSFB2a(2)    --------->DAG2  <---------ARR14(2) --------->HSFB2a(1)--------->bZIP60(2)   <------ ---LBD16        ---------->DOF2  --------->ARR14(2) <---------HSFB2a(1)<---------ANAC55(2)  <-------   gaagcaaacagctatgtcaaaaagctgctctgtatcgatcctctgcgacgacggaaccctccaaatcagttgccacgtgtcggtggagacttctgccacc  20678000     ------->GAMYB    --------->MYB46(3) -->NtERF2 ============MYC_MYB ---->DREB2C(2) ---->DEAR3(1)                                                                               <------- ---->RAP2.6(2)                                                                          <-------GAMYB -->GAMYB                                                                               --------->MYB52(2) -NtERF2 --------->ZAT14                                                                <------MYB83 --->ATERF1(1)                    --------->ARR14(1)                                    <------MYB46(1) --->RAP2.3(1)                    --------->GLK1(2)                                     <---------MYB46(3) --->MYB46(3)                    <---------ARR14(2)            <---------DEAR3(1)     <--------P ===MYC_MYB                      --------->ARR14(2)    <-------GAMYB                 <-------GAMYB ---->ANAC46                     <---------GLK1(2)    <---------ANAC46              --------->MYB55(2) ---ATERF1(1)                    <---------ARR11(3)  <------NtERF2<---------DEAR3(1)<---------MYB46(3) --ALFIN1<---------ZAT14       ----------->ARR10   <---------DEAR3(1)            <----------DOF2    <   gccataaccatcgcactgttgaacaccattaccaagattctctctctctcaaggctgcgttgaattcggcgatgggtttttttctttggttggttacgat  20678100                              ----------->GT1                              <------MYB83                              <------MYB46(1)                             --------->MYB46(2)                             --------->MYB59                         <---------ANAC58                         <---------ANAC58                     <---------ANAC58                     <---------ANAC58                     <---------ANAC46             <---------ARR14(2)             --------->ARR14(2)  ---------->DOF2                   <----------DOF2           <-------          --------->ANAC46 <---------MYB52(1)                     <---------MYB52(1)         --------         --------->HSFB2a(2) <---------MYB46(3)              <---------WRKY18(1)           --------->ZAT14         <---------LBD16<---------TOE1(2)<-----------RAV1(1)----------->HVH21          <---------ALFIN1 --YAB1  <---------HSFB2a(2)<---------MYB55(1)              --------->WRKY12          --------->MYB46(3) -----------GT1   <---------MYB52(1)   <----------DOF2      --------->WRKY38(1)       <---------MYB55(2)   tttgacttcttctcggaaccgtttcgtgcgtttggtaaagactttgttgttgtttttgcaagttgaccgtttttttgttttttgcacaaccactgttcac  20678200                                                                             <----------DOF2                       --------->ALFIN1            --------->HSFB2a(1)       <---------DAG2  <------ZmHOX2a(2)<---------TOE2(3)               <---------HSFB2a(1)     ------>MYB46(1) --ZAT14           <---------TOE1(3)               --------->HSFC1(2)      ------>MYB83 --------->ZAT6 ->ZAT14      <----------DOF2                      <---------HSFC1(2)     <---------ALFIN1     ------   tgggatcagtttggaacttttaagggtgtttcattcgaaagttggaagttggaaccttgggcttaaaaaacaaaacccacttttgaacttacacttctaa  20678300                                                                                              <------                                                                                              -------                                    <---------ANAC46                                    <-----------HVH21                                    <---------ANAC58             --------->YAB1      <---------ANAC58                                    <---------ANAC58            <---------YAB1       <---------ANAC55(2)           <---------ARR11(3) --------->ARR11(3)              ------>ZmHOX2a(1)      <---------ANAC58    ----------->GT1           <---------ARR11(3)            <---------ANAC46         --------->ANAC55(2)  ---------->DOF2      <------ZmHOX2a(1)          <---------TOE2(3) <---------ICU4<---------MYB52(1) ---->DOF2 --------->ARR11(3) <---------GLK1(2)   <---------TOE1(3) ---------->DOF2  <---------ANAC55(1)   agcccaaagttaaaatctttggacaggaactagattttgggtgtataagtttaaagtttgtgtcctataataaaggcccaaaccattacttgtcactgaa  20678400                                                   <---------YAB1                                                 *TSS                                        --------->DAG2   --------->ALFIN1                   --------->CCA1(2) --------->CCA1(2)            <---------ANAC46 <------------CBF ---ZAT14                   <---------MYB46(3) <---------GLK1(2)       <----------DOF2 -->ZAT14                  <--------P--------->ARR11(3)           <<<<<<<<<TBF1   gagagatggagccactgaaatatcaaatggttgtttgaagataaggccagattgtgagtgttgtcttcttcttctttctctatggctaaactctgaaacg  20678500                                                                                <---------AHL20(2)                                                                               --------->AHL20(2)                                                                     ------>ZmHOX2a(2)                         <-------TEIL                               <------ZmHOX2a(2)                     <---------AtMYB61                             <---------AGP1                   <----------DOF2                                 --------->ARR11(3)                  <---------ANAC58                                 <---------ARR11(3)                  <---------ANAC58          --------->ANAC46       --------->ARR14(2)        <---------RAP2.6(3)                 --------->ANAC55(2)    <---------ARR14(2)              <-        --------->At5g28300                 <---------O2           <---------ARR14(3)         <------       <---------ANAC55(2)                  --------->O2  <----------DOF2      <---------AHL20(2)  <-       ----------->GT1<---------MYB46(3)    <---------ANAC55(2)  ----------->ARR10            =======       --------->ANAC55(2)          ------->TEIL    <---------DAG2<---------CCA1(2)    --------->At4g35610       --------->RAP2.6(2)     <---------ANAC55(2)  <----------DOF2--------->ARR14(3)  <---------At4g35610   ttttcagagccgtaacaatggctttggttcattacatgaatgtttcacgtagcacttttcctttgagtagatcttcaaagattaatttgagctcatcttt  20678600                                                                                   <---------ANAC58            <---------ZAT14                                                        <---------ANAC58            --------->ZAT14                                                    <---------LBD16          --------->O2                                                     <-----------HVH21          --------->bZIP60(2)                                              <----------DOF2------>ZmHOX2a(1)   =================bZIP_DOF                                       <---------At4g35610<---------ARR14(2)   <----------DOF2                                      --------->AtMYB61<---------At4g35610 --------ANAC58    --------->YAB1                      --------->MYB46(3)--------->At4g35610   <----- ----DOF2 --------->TGA1a                 --------->ARR14(2) --------->At4g35610 --------->LBD16 --------ANAC58   <-------TEIL            <---------ARR14(2) <---------At4g35610--------->DEAR3(1) ===================bZIP_DOF--------->TOE2(3) ------>ZmHOX2a(1)    --------->At4g35610--------->ARR14(2)   tgcttctttgccacttcagtttcataaaaacattaagagattagaatcctctgttccaccatcagcttcagcttcagcttcaccggcgtttcctattgat  20678700          ------>NtERF2          --------->LBD16         <---------DEAR3(1)                              <---------AHL20(2)        <---------LBD16                                  <---------ICU4     <---------GLK1(1)                         --------->CCA1(2)    --------->ARR14(2)                        <---------ARR11(3)    --------->ARR11(3)                        --------->ARR11(3)    <---------ARR14(2)                        <---------ARR14(3)    <-----------ARR10              <---------ALFIN1----------->GT1    <---------ARR11(3)   ------>NtERF2        --------->ARR14(3) <---------ANAC58       ------>NtERF2         <---------ARR14(2)                <---------AHL20(2) <---------ANAC58       --------->LBD16       --------->ARR14(2)                --------->AHL20(2) ----TOE2(3)          <---------LBD16 <----------DOF2   --------->ICU4      <----------DOF2         -   gttgagtatctccggcgagagttctccggccatggagccactttcgaagatattggtaaatatttctctagtttcagtctttttaaatgaaacgagtttt  20678800                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                              <------MYB46(1)                                                 <------                              <------MYB83                                                    <------                              --------->ZAT2                                                 ========                              <---------ZAT2                                                 <-------                       =================RAV                                                  --------                       <-----------RAV1(1)                                                   <<<<<<<<                  --------->YAB1              <---------ANAC58             <---------At4g35610-------                 <---------YAB1               <---------ANAC58          <---------ZAT14      <-------            --------->ZAT6    --------->At4g35610                     --------->GLK1(1)      <-------       --------->TOE1(3)    <-----------RAV1(2)                       <---------GLK1(1)      -------- --------->DOF2<----------DOF2<---------At4g35610           <<<<<<<<<<<<<<<<<LFY     --------->ICU4 <   aaaaaagaagcttaacactttgataatggggcaggtgagacatgtattgctagactaaaactggacaatgggagttcagcgaatgtgatgttgacacgtg  20678900  Previous    Next  AGI:  At1g55365.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56520.1) Range:  from: 20677649    to: 20678029    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g55370.1    Description:  carbohydrate binding / catalytic. similar to carbohydrate binding / catalytic [Arabidopsis thaliana] (TAIR:AT1G64770.1); similar to carbohydrate binding / catalytic [Arabidopsis thaliana] (TAIR:AT1G64770.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23489.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013) Range:  from: 20678449    to: 20680115    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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