Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(2)                             --------->AHL20(2)                            --------->AHL20(2)                    ------->MYC2                    ------->MYC3                    <-------MYC2                    <-------MYC3                    <-------PIF5                    ------->PIF5                    ------->MYC4                    <-------MYC4                   --------->O2                   --------->TGA1a                                     ------>MYB46(1)           ----                   <---------O2                                        --------->MYB52(1)        ----                   <---------ANAC46                                    ------>MYB83              <---                   <---------TGA1a                                   --------->MYB46(3)          <---              --------->ARR14(2)  <---------At5g28300                <---------MYB46(2)       <------    <---------ARR11(3)      <---------AHL20(2)                 <----------DOF2            <---------ATHB12    --------->GLK1(2)      <---------AHL20(2)            ----------->GT1             <---------MYB59    --------->ARR11(3) <---------CCA1(2)               <---------GLK1(2)     <---------ZAT18--------- --------->GT1<---------ARR14(2) <-----------GT1  --------->MYB52(1)--------->ANAC46 --------->TOE2(3)   atggaaaatctattaatatccacgtgtatattaatttacagtgtctaaaaaaaaacagattgtaactttcaccaaacagggcatttacctaaatcaatca  20677600                                                                                <---------ICU4                                                                       --------->ATHB51                                                                       <---------ICU4                                                                      <---------YAB1                                                                      --------->ICU4 ----->At4g35610                                                    --------->YAB1 ----->ZAT2                                ----------->GT1         <---------YAB1 ------ZAT2                            <---------AHL20(2)       <---------ZAT6  --------->YAB1 ------At4g35610                       --------->AHL20(1)       --------->ICU4 --------->ICU4 ---ATHB12                             --------->AHL20(2)   --------->ZAT14    <---------YAB1 >WOX13(1)                            --------->AHL20(2)    <---------ZAT14  --------->YAB1        <-   gctcagaaaaccccaaaatttagaaaaactatatatacaaaaaaattgttaatctgaatgagagtagtgatcataattgtcatcatcaaacgatgaaata  20677700             --------->YAB1            --------->At4g35610                                               --------->At4g35610          <---------ICU4                                                   --------->At4g35610          --------->YAB1                                --------->ANAC58 --------->YAB1         <---------YAB1           --------->YAB1 --------->YAB1          <---------ICU4       --------->YAB1    --------->YAB1       --------->YAB1          <---------ICU4       <---------ICU4    <---------ICU4      <---------YAB1           --------->YAB1      <---------YAB1  <---------ICU4      <---------YAB1--------->ANAC58<---------YAB1    --------->YAB1    --------->YAB1     <---------GLK1(2)         --------->YAB1          >>>>>>>>>TBF1    <---------ICU4   --------->ICU4    --------->ICU4 ---------->DOF2<---------YAB1     >>>>>>>>>TBF1 --------WOX13(1)  --------->YAB1<---------YAB1 <---------YAB1    <------ZmHOX2a(2) --------->LBD16--   gattgatcatcatcatcagaataataatcacgacgattataaagattattatgatcaaaagcaagtcgatcatcatcatcagcctccgaagaagaagaag  20677800             <---------ANAC46             <---------ANAC58             <---------ANAC58            <---------TOE1(2)            --------->SPL7          <---------SPL7        --------------->AtSPL3                                                                     --        <---------------AtSPL3     --------->At4g35610                                             --   --------->DAG2                --------->YAB1           <-------TEIL     --------->MYB52(1)  <-----  ---------->DOF2              --------->GLK1(2)     ---------->DOF2    --------->ANAC58      <------ ------->At4g35610             ------------------------>ANAC81          --------->ANAC58    ------->TEIL   cagataaagtctcgtacgtgtaagagtagaaagaatcagaagaaggaagacacatgaaagtccataaacagagaacgaaacgactcaattgatgaatcgg  20677900                                                                                --------->ALFIN1                                                                               <-------GAMYB                                                                              <---------MYB46(3)                                                                             <---------DEAR3(1)                                                                             <---------DREB2C(2)                                                                             <---------At1g77200                                                                             <---------DEAR4(1)                                                                             --------->ETT(1)                                                                             <---------ANAC46                                                                           <-----------HVH21                                                                          ----------->HVH21                                                                          --------->ALFIN1                                                                         <-------MYC3                                                                         ------->MYC3                                                                         <-------MYC2                                                                         <-------MYC4                                                                         <-------PIF5                                                                         ------->MYC2                                                                         ------->PIF5                                                                         ------->MYC4                                                     <---------HSFC1(2) --------->ANAC55(2)      ----                                                   --------->ARR14(2)   <---------ANAC55(2)     -----                                                   <---------ARR14(2)   =============================                                                --------->ANAC46        --------->O2            -----                                                --------->ANAC58        <--------ABF1           -----                                                --------->ANAC58        <<<<<<<<<<AtMYC2        -----                                              ------>NtERF2             =============================                                             <---------O2               ===============MYC_MYB ------                                             ----------->HVH21          <<<<<<<<<<HY5          ------                                             --------->DEAR3(1)         <<<<<<<<<<ABI5         ------                                             --------->O2               <---------O2           <-----                                          ----------->HVH21      --------->At4g35610          ------>NtERF2   --------->MYB52(1)                 ----------->RAV1(2)        <---------At4g35610          <------ ------->ANAC58                       ------>ZmHOX2a(1)       <---------ATHB12<---------DEAR3(2)----- ------->ANAC58                    <------ZmHOX2a(2) --------->HSFC1(2) --------->TGA1a <---------At4g35610 ----HSFB2a(2)    --------->DAG2  <---------ARR14(2) --------->HSFB2a(1)<---------TGA1a --------->At4g35610 ---LBD16        ---------->DOF2  --------->ARR14(2) <---------HSFB2a(1)--------->bZIP60(2)  <-------   gaagcaaacagctatgtcaaaaagctgctctgtatcgatcctctgcgacgacggaaccctccaaatcagttgccacgtgtcggtggagacttctgccacc  20678000     ------->GAMYB    --------->MYB46(3) -->NtERF2 ---->RAP2.6(2) ===MYC_MYB ---->ANAC46                                                                                 <------- ---->DREB2C(2)                                                                          <-------GAMYB -->GAMYB                                                                               <---------MYB46(3) ============MYC_MYB                                                                    <------MYB46(1) --->ATERF1(1)                    --------->GLK1(2)                                     <------MYB83 --->RAP2.3(1)                    --------->ARR14(1)                                    --------->MYB52(2) --->MYB46(3)                    --------->ARR14(2)            <---------DEAR3(1)     <--------P -NtERF2 --------->ZAT14         <---------ARR14(2)    <-------GAMYB                 <-------GAMYB ---ATERF1(1)                    <---------GLK1(2)    <---------ANAC46              --------->MYB55(2) ---->DEAR3(1)                   <---------ARR11(3)  <------NtERF2<---------DEAR3(1)<---------MYB46(3) --ALFIN1<---------ZAT14       ----------->ARR10   <---------DEAR3(1)            <----------DOF2    <   gccataaccatcgcactgttgaacaccattaccaagattctctctctctcaaggctgcgttgaattcggcgatgggtttttttctttggttggttacgat  20678100                              ----------->GT1                              <------MYB83                              <------MYB46(1)                             --------->MYB46(2)                             <---------MYB46(3)                         <---------ANAC58                         <---------ANAC58                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58             <---------ARR14(2)             --------->ARR14(2)  ---------->DOF2                   <----------DOF2           <-------          --------->ANAC46 <---------MYB52(1)                     <---------MYB52(1)         --------         --------->HSFB2a(2) --------->MYB59                 <---------WRKY18(1)           --------->ZAT14         <---------HSFB2a(2)<---------MYB55(1)              ----------->HVH21          <---------ALFIN1 --YAB1  <---------LBD16<---------TOE1(2)<-----------RAV1(1)--------->WRKY38(1)       --------->MYB46(3) -----------GT1   <---------MYB52(1)   <----------DOF2      --------->WRKY12          <---------MYB55(2)   tttgacttcttctcggaaccgtttcgtgcgtttggtaaagactttgttgttgtttttgcaagttgaccgtttttttgttttttgcacaaccactgttcac  20678200                                                                             <----------DOF2                       --------->ALFIN1            --------->HSFB2a(1)       <---------DAG2  <------ZmHOX2a(2)<---------TOE2(3)               --------->HSFC1(2)      ------>MYB83 --------->ZAT6 --ZAT14           <---------TOE1(3)               <---------HSFB2a(1)     ------>MYB46(1) ->ZAT14      <----------DOF2                      <---------HSFC1(2)     <---------ALFIN1     ------   tgggatcagtttggaacttttaagggtgtttcattcgaaagttggaagttggaaccttgggcttaaaaaacaaaacccacttttgaacttacacttctaa  20678300                                                                                              -------                                                                                              <------                                    <---------ANAC58                                    <-----------HVH21                                    <---------ANAC58             --------->YAB1      <---------ANAC55(2)                                    <---------ANAC46            <---------YAB1       <---------ANAC58           --------->ARR11(3) --------->ARR11(3)              ------>ZmHOX2a(1)      <---------ANAC58    ----------->GT1           <---------ARR11(3)            <---------ANAC46         --------->ANAC55(2)  ---------->DOF2      <------ZmHOX2a(1)          <---------TOE2(3) <---------ICU4<---------MYB52(1) ---->DOF2 <---------ARR11(3) <---------GLK1(2)   <---------TOE1(3) ---------->DOF2  <---------ANAC55(1)   agcccaaagttaaaatctttggacaggaactagattttgggtgtataagtttaaagtttgtgtcctataataaaggcccaaaccattacttgtcactgaa  20678400                                                   <---------YAB1                                                 *TSS                                        --------->DAG2   --------->ALFIN1                   --------->CCA1(2) --------->CCA1(2)            <---------ANAC46 <------------CBF -->ZAT14                   <---------MYB46(3) <---------GLK1(2)       <----------DOF2 ---ZAT14                  <--------P--------->ARR11(3)           <<<<<<<<<TBF1   gagagatggagccactgaaatatcaaatggttgtttgaagataaggccagattgtgagtgttgtcttcttcttctttctctatggctaaactctgaaacg  20678500  Previous    Next  AGI:  At1g55365.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56520.1) Range:  from: 20677649    to: 20678029    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g55370.1    Description:  carbohydrate binding / catalytic. similar to carbohydrate binding / catalytic [Arabidopsis thaliana] (TAIR:AT1G64770.1); similar to carbohydrate binding / catalytic [Arabidopsis thaliana] (TAIR:AT1G64770.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23489.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013) Range:  from: 20678449    to: 20680115    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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