Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ------>ZmHOX2a(2)                  <---------GLK1(1)                  <------ZmHOX2a(2)                                              --------->AHL20(2)                  --------->GLK1(1)        ------>MYB46(1)                      --------->AHL20(1)                 <---------AGP1            ------>MYB83                         <---------AHL20(1)             ---------->DOF2   --------->WOX13(1)                          --------->AHL20(2)       >  --------->YAB1 <---------ARR11(3)       --------->WOX13(1)     --------->ZAT6--------->AHL20(2)  -- <---------YAB1  --------->ARR11(3)      --------->AtMYB61  --------->AtMYB61--------->AHL20(2) <---- ----->ARR11(3) --------->RVE1(1) --------->YAB1         ------------------------>ANAC81--------->TOE2(3)   attatgataatgttctaaagatctctcatttgtctatcaaaaaccaatccaaatagaagaaaccaaaacactaaaaaaaaaatatatatacctgaatgct  20672000                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                         <------NtERF2                                                                         ------>NtERF2                                                                        <---------RAP2.3(1)                                                                        --------->LBD16                                                                       <---------RAP2.3(3)                                                                       <---------RAP2.3(2)                                                                 ------->TEIL                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                               --------->LBD16                                                               <---------SPL7                                                               ----------->HVH21                                                              --------->DEAR3(1)      ----------->GT1                                                             <---------LBD16        <----------ID1    <---------At4g35610                                    --------->ANAC58    --------->YAB1    <---------ZAT2                                         --------->ANAC58   <---------YAB1 >>>>>>>>WRKY18                                            --------->ANAC46<---------SPL7 --------->HVH21                                      ----------->ARR10<---------DEAR3(1) ------DOF2<---------MYB46(3)                       <----------DOF2    <---------RRTF1(2)         ---   tttgacagcaggtttgttcagcctgttcaaatgtttcttcacttcaaacttctgctttgatacgccggaccttgcggcgtatgatagcgagaaaaaaccc  20672100                                                                                                -----                                                                                               ------                                                     <---------ALFIN1                        --------                                      --------->DEAR3(1)   ------>ZmHOX2a(1)                 <-------                            <---------MYB59          --------->AtMYB61--------->ANAC58    <---------ANAC58                           --------->STY1(2)       ------->TEIL       --------->ANAC58    <---------ANAC58 ------->DOF2              <---------At4g35610   <-------TEIL     <-----------HVH21   <----------DOF2   caaagacataaacacactaagaaacctctagctaacttcgccgtgctaagatgcaccactcctcccattgtcacccaaaaaacaaactcttttcgtccac  20672200                                                                     <------ZmHOX2a(1)        <------                                                                  ===============================RAV                                                                  <-----------RAV1(2)       <--------       <-----------GT1                                       ----------->HVH21       <-----------RAV1(1)   <----------DOF2                   --------->TOE2(3)       --------->ZAT18        <---------TOE2(3) ---->ANAC46                         --------->TOE1(3)       <---------ZAT18     <---------YAB1 --->At4g35610                ---------->DOF2              --------->At4g35610 --------->YAB1<-------GAMYB ->ZAT18                   <------ZmHOX2a(1)               <---------At4g35610 --------->ATHB12   <-- --ZAT14         ---------->DOF2   ------->TEIL       <------ZmHOX2a(1)       --------->ICU4---------   tgaagctttaaaccccctcaaaagaagaaggagaaagaaccttaaacagaagaagaggaagagctcacacaggagaatgaatgattaatgttgttcgtta  20672300                   <---------ARR14(2)          <---------MYB55(2)                   <---------PCF2              --------->MYB46(3)                   --------->ARR14(2)         ------>MYB46(1)                  <------MYB83                -------->P<------ZmHOX2a(2)                   *TSS                  <------MYB46(1)             ------>MYB83   <---------ARR14(2)             <-------- ---MYB52(1)     <---------MYB46(3)    --------->MYB46(3)    --------->GLK1(2)             <---------REM1(2) -MYB46(3)      --------->ALFIN1<---------ANAC58------->GAMYB--------->ARR14(2)  <<<<<<<<<TBF1 --------ID1 --------->DAG2     <---------ANAC58----------->RAV1(1)  <----------DOF2       <---------ZAT14 >MYB52(2) ---------->DOF2    --------->ARR11(3)--------->AtMYB61    <---------DAG2        --------->ZAT14   gggacaaagttttgaaaggtgggtctggtttagttcttgcaacaatccaaccacacagatcaaaatccgaacttttctatttcttcttctctctacactt  20672400                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC55(2)                                                                       <---------ANAC46                                                                       <---------ANAC55(1)                                                                       --------->ANAC55(2)                                                                     <-----------GT1                                                                 <---------AHL20(2)                                                <---------ALFIN1 --------->AHL20(2)                                         <---------DAG2         --------->AHL20(2)                                         <----------DOF2<---------ARR11(1)                 <----------DOF2     --------->ZAT14    <---------ARR11(3)              <-----------GT1        <---------ZAT14    --------->ARR14(2)    <-----------GT1      ---------->DOF2              --------->ANAC46    <---------CCA1(2)     <-----------GT1        - -ALFIN1   <----------DOF2     <-----------GT1<---------ALFIN1 <---------AHL20(2)                   <   gcacagaagaaagctttaactttctctctcttatcacacttcactttcccactctccatatctattttaaattacgtttttacccttctctctctctgta  20672500                        <-----------GT1                     <---------AHL20(2)                     --------->AHL20(2)                <---------AHL20(1)                --------->AHL20(2)                <---------AHL20(2)                --------->AHL20(1)                            <---------------AGL15            --------->YAB1                                    --------------->AGL15           <---------AHL20(2)                                <-----------------AGL3           <---------YAB1 <-----------GT1                    ----------------->AGL3           --------->AHL20(2)                                <-----------------AGL2          <---------AHL20(1)                                 <-----------------AGL1 <----------DOF2<-          --------->AHL20(2)                            <---------AHL20(2)          <---------DAG2 <-          --------->AHL20(1)                            <---------ATHB51           <---------DAG2  -- -------->ATHB1<---------ICU4                       --------->AHL20(2)           ------->TEIL      <- --------->ATHB51    <---------ICU4       <----------DOF2<---------ICU4    <---------KAN4(1)      --- --------->ATHB12<---------YAB1     <---------ARR14(2)  --------->AHL20(2)--------->ARR14(2)      <-- <---------ICU4--------->YAB1       --------->ARR14(2) <---------AHL20(1) <---------ARR14(2)      --- -------->ICU4<---------YAB1 <----------DOF2     --------->YAB1        <---------ANAC46           <-- ---------YAB1--------->ICU4 <---------DAG2   --------->TOE2(3)<----------DOF2 <---------ZAT18  <----   gaattattggaatataattataattttttcactttcccaattcgctttccttcataaaataattccttttatggcgaatattgcaccttttccaattacc  20672600     <---------YAB1     <---------AHL20(2) --------ARR11(1)                                --------->AHL20(2)   --------->TOE2(3) --------ARR14(2)                           ------->TEIL        <---------AHL20(1) ------->ARR14(2)                     ------->TEIL          <---------AHL20(2) --------ARR11(3)                     <-------TEIL         --------->AHL20(2)                    ---- --->MYB83                        <---------TOE2(3)        <---------AHL20(1)                    ---- -------CCA1(2)               <----------DOF2  <---------ANAC55(2)  <-------TEIL               <----- --->MYB46(1)                 --------->TOE2(3)----------->GT1  --------->ARR11(3)    --------->ATHB12 -------ARR14(1)  <----------DOF2 <---------------AtSPL8   <---------AHL20(2)   --------->YAB1------- -----MYB59      --------->TOE2(3)--------------->AtSPL8   --------->AHL20(1)  <---------YAB1 =======   aaatctttttattgcaaaacctttttcgaaaactttaatgtacatgaatatgtaaatacaatttaatatatacattagataatgaaaatgactggaacca  20672700                                                                                            ---------                                               <---------AHL20(2)                       <---------TOE2(3)                                               --------->AHL20(2)                     ---------->DOF2                                              --------->AHL20(2)               --------->ANAC58                                       <---------WOX13(1)                      ----------->GT1                                    <---------YAB1                         ----------->GT1  <--------                                <---------AHL20(1)                     --------->ICU4 --------->MYB52(1)        --------->YAB1          --------->AHL20(1)                  <---------------AGL15   --------- -->MYB83<---------AHL20(2)     --------->ARR11(3)                  --------------->AGL15  <---------GLK1(2) -->MYB46(1)            <------ZmHOX2a(1)----------->GT1    --------->YAB1<---------------AtSPL8 ----MYB59    <---------MYB46(3)<---------ARR11(3) --------->YAB1 ----------->GT1--------->AHL20(2) ---------->AGL3    --------->TOE1(2)--------->ATHB12       --------->AHL20(2) --------->ANAC58 ===================================================================================MADS_MADS   aattttgctataatattggttacataggacccaaaatattgattggaaattaataaaaacaataatatttgtaaaaatggtaagaaaataaaggaatctg  20672800                               ---------->DOF2                         <---------AHL20(2)                        <---------AHL20(1)                        --------->AHL20(2)                        <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                                       <---------ANAC58                   <---------AHL20(2)                                        <---------ANAC46      --                   --------->AHL20(2)                                       ---------->ID1      <----                   <---------AHL20(1)                                  --------->At4g35610--------->At5g28300                <---------AHL20(2)                                     <---------ZAT2    ----------->GT1                --------->AHL20(1)                                     --------->ZAT2  <---------LBD16 >GLK1(2)       --------->AHL20(2)                            <------ZmHOX2a(2)       ------------>AtMYB77 -ARR14(2)     --------->AHL20(2)                   <-----------HVH21  <---------At4g35610<-------GAMYB >ARR14(2)     <---------AHL20(2)          ----------->GT1  <------ZmHOX2a(1)<---------ANAC58   -----   gtggaaagttgaagaaaataatttaattttttttaaagagggacaatgtgaaatggtcagaaggatcagagccagcttggcgtttcatccacggttatat  20672900  Previous    Next  AGI:  At1g55360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56530.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22094.1); similar to unknown [Populus trichocarpa] (GB:ABK93966.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72570.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 20669888    to: 20672392    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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