Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------TOE1(3)                                <---------TOE2(3)                                <---------YAB1                    --------->ANAC46       ------>ZmHOX2a(2)                    --------->ANAC58      <------ZmHOX2a(2)          --------->ZAT18  <---------ZAT6--------->ARR11(3)                                     <---- --------YAB1       --------->ANAC58     <---------ARR11(3)    --------->YAB1  <-------TEIL    ------ --------TOE2(3)   --------->ZAT18 --------->CCA1(2)          ----------->GT1 --------->CCA1(2)<-----   taagataacaagggcattaagcacaccaagtgttaagataaacgatctcataaacagtgatgaattgataatacacatagatacatagagaaacagatgg  20652200                                               --------->AtLEC2                        ---------->DOF2                                               --------->ANAC46                  ----------->GT1                                               <---------ANAC55(2)          <---------ICU4                                               --------->ANAC58             --------->YAB1     <---------TOE2(3)                         --------->ANAC55(1)         <---------ATHB51 --------->TOE2(3)                             --------->ANAC55(2)         <---------AHL20(2)      -- ---GAMYB                                      --------->ANAC58         <---------AHL20(2)    ------- ----->GT1 --------->YAB1    --------->ZAT6 <---------ATHB12           --------->AHL20(2)    -------- ----MYB46(3)      ----------->RAV1(1)--------->GLK1(2)                <---------AHL20(2)   <--------   ttacattaagaaataagaatgcaacattctaacaatagagaatcaaatcacgcaaactcattaacaaatgcaattaaataatgaagaaaaaaagaatgat  20652300                                                                                         ============                                                                                         <----------DOF2                              --------->At4g35610                                      <---------At4g35610                          ----------->RAV1(1)                                    <---------At4g35610                         --------->MYB46(3)                                  --------->ALFIN1                       ----------->RAV1(1)                     --------->At4g35610 --------->ALFIN1                    --------->ANAC58                          ----------->RAV1(1)--------->At4g35610                    --------->ANAC46                        <------NtERF2  <---------ANAC58        <- -------->DOF2      --------->ANAC58                        <---------At4g35610  <---------ZAT2    -- -->YAB1          ---------->DOF2           <---------------AtSPL8         <---------ANAC58    ------ ->ICU4     <---------At4g35610          --------->ALFIN1   --------->At4g35610  --------->ZAT2====== -KAN4(2)   --------->At4g35610  <-------TEIL        <---------ICU4   --------->ALFIN1 --------->At4g35610   caaaagatgaaaccagatgccaaagcaacaacagatgcaaacagtgctggtacaaacatggcagcatcagaagttgggcttggagctggagcttcaacgg  20652400                                  --------->YAB1           <---------ZAT2         --------->TOE1(3)           --------->ZAT2         --------->TOE2(3)           --------->At4g35610 ------->GAMYB           <------NtERF2      --------->MYB46(3)           <---------At4g35610<---------MYB52(2)         ===============================RAV         <---------RAP2.6(2)  <---------MYB111(2)      --------->ALFIN1        <---------MYB55(2)      ----------->HVH21       <---------MYB111(1)     <-----------HVH21    --------->LBD16     --------->LBD16     --------->DEAR3(1)    ========================bZIP_DOF    ===================================MYC_MYB    <---------O2 ---------->DOF2-------->P    <---------TGA1a      --------->ANAC46    <---------ANAC58     --------->ANAC58    <---------ANAC58     --------->ANAC58  --------->At4g35610   <------NtERF2                                    --------->AHL20(2) =============bZIP_DOF ------>NtERF2                                    <---------MYB52(1) --------At4g35610 --------->ANAC58  --------->YAB1          --------->ATHB12             <---------ANAC58 ------->At4g35610 --------->ANAC58 <---------YAB1           <---------ICU4               <---------ANAC58 ->GAMYB <-----------RAV1(2)----------->RAV1(1)  --------->YAB1     ------>NtERF2         <---------ANAC46 =============MYC_MYB --------->DEAR3(1)   --------->ANAC46 <---------YAB1        <----------DOF2 ---   tagcagccgtggcagctgagaaagccaccgcaacaaccataataaacaccatcatcttcatcttcattgcctccattaattctcctttgatgtcttgaaa  20652500                                                         *TSS                                                      --------->YAB1                                                   --------->YAB1                                                  --------->ICU4        <------------CBF                                                  ----------->GT1    <------MYB83                          <---------YAB1     <---------ANAC46 --------->ALFIN1    <---------AHL20(2)                 <---------ARR11(3)       <-----------RAV1(1) <---------ANAC46  <-----------TBP                 --------->ARR11(3) --------->ATHB12 <---------YAB1  <------MYB46(1)       <--------- ------>YAB1     <---------GLK1(2) <---------YAB1 <---------YAB1    <---------AtMYB61   ------------>CBF   taagaatttataagagaaagattttgttattcttgttttgatttgtgttgtgatgataatagttgtggggatggtattgtctatttatacaacaattgta  20652600                 <---------ARR14(2)                 <------------CBF                 --------->ARR14(2)             <------NtERF2            ----------->GT1           --------->ATERF1(2)         <---------ZAT2         --------->ZAT2                                                     <----------DOF2         --------->At4g35610                                             <-----------GT1      <---------At5g28300                                            <----------DOF2     <-----------GT1                                         <---------ALFIN1     -------->P --------->ARR11(3)                               <----------DOF2    ------>ZmHOX2a(1) <---------ARR11(3)                        <---------GLK1(2)--------->MYB46(3)    ------>MYB46(1) ---CBF  <---------At4g35610         --------->ANAC46       <---------MYB55(2)    ------>MYB83   tgagattttacagctggcaaattggctgtctcttggcccaaaccacattcttctttttctcaaccactgtccttttttctttccaacctcacaaaaacgt  20652700                                                                                                  <--                                                                                            <--------                                                                                          <------MYB46(1)                            ------->TEIL                                                  <------MYB83                  >>>>>>>>>ARR2                                             --------->REM1(1)     ---                 --------->ATHB12                      <---------MYB46(3)  <-------TEIL  <---------AtMYB61    --------------->AGL15--------->ICU4    <---------bZIP60(1)         ----------->GT1<-----------RAV1(1) <-----------GT1<---------YAB1             --------->bZIP60(1)  <------ZmHOX2a(1)   <----------DOF2   tttttactaatttttgttttgattgtaatgaattttgtatttgtgacttcacatgagttgttcaaaggataagaagttacatctaactttgttggtgtat  20652800                                                           ------>MYB46(1)                                                           ------>MYB83                      --------                                                         <---------MYB59              ----------->GT1                                                      <-----------GT1             <---------At4g35610 -------AHL20(2)                                   --------->YAB1                 --------->At4g35610 -ANAC46<---------YAB1      <---------GLK1(2)    <---------YAB1              --------->At4g35610 ------>AHL20(2)      <---------AHL20(2) --------------->AtSPL8              <---------At4g35610   ttaaaaagtttttattctacttatttaaaagattagctattacttagtactattaataaccaaactctagatgagattgagatgagctaagtaaaattct  20652900                                                                 <---------YAB1                                                               --------->YAB1                                      <---------YAB1    --------->YAB1                             --------->YAB1        --------->ZAT14                            <---------YAB1         --------->ZAT18                                 --                          <-----------GT1          <---------ZAT18                                <--                      --------->AHL20(2)           <---------ZAT14                ----------->GT1----                      <---------AHL20(2)       <---------------AtSPL8      --------->TOE2(3)     ----                      --------->AHL20(1)       --------------->AtSPL8    <-------TEIL  <---------YAB1 ->GLK1(2)      <---------AHL20(2)  --------------->AGL15  --------->AHL20(2) --------->AHL20(2) <---   atagtttttttagtgtattaaaaattttttatcatatactattatttggagagtacactcataaattataacaaatacattaatatgttattagaaaaat  20653000                                                                                                  <--                                                                                                  ---           <---------AHL20(2)                                                                    <---          --------->AHL20(2)                                                                     ----          <---------AHL20(2)              <---------GLK1(2)                                   -------  --------->YAB1                    ------>ZmHOX2a(2)                                         <------ <---------YAB1                    <------ZmHOX2a(2)                                  --------->ARR11(3) ------->YAB1                     --------->ARR14(2)                                  <---------ARR11(3) -------AHL20(2)                  <---------TCP20  --------->ALFIN1                   <---------AHL20(1) ----->AHL20(1)                   <---------ARR14(2)   <------ZmHOX2a(2)             --------->CCA1(1) ----->AHL20(2)                 --------->LBD16 --------->DAG2          <----------DOF2  <----------DOF2 ------AHL20(1)               <---------LBD16  ---------->DOF2       <-----------GT1 --------->RVE1(1)   ataatcatagaatttaatccacttagtaatctcgcggatccacagattataaagtggatcaagtcttagattaacttttatcagttaatatctttataaa  20653100  Previous    Next  AGI:  At1g55330.1    Description:  AGP21 (ARABINOGALACTAN PROTEIN 21). Identical to Arabinogalactan peptide 21 precursor (AGP21) [Arabidopsis Thaliana] (GB:Q9C8A4) Range:  from: 20652131    to: 20652557    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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