Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->MYB52(1)                                                                                   ------>MYB46(1)                                                                                   ------>MYB83                                                                                  --------->MYB55(1)                                                                                 --------->MYB46(3)                                                                                 <---------MYB52(2)                                                                                 <---------MYB55(2)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                               --------->RAP2.3(3)                                                                              <---------ALFIN1                                                                             --------->At4g35610   <-                           <---------At4g35610  ----------->HVH21           --------->RAP2.6(2)    <- ---->ARR14(2)             --------->At4g35610 <---------KAN4(2)            --------->DEAR3(1)     <- -----ARR14(2)    <----------DOF2           --------->ANAC58                --------->ANAC46       <- ->SPL7       --------->DAG2                --------->ANAC58           <---------MYB52(2)  ----------   tactcatacatcccataaggctttgagacatctgaatagtatcaccacgaatgacctatggaaccagaagacaactagccgcacccaacgatacaaagat  20640700                                                        ----------->GT1         --------->KAN4(2)                             --------->DAG2       <---------YAB1                                 ---------->DOF2                   <---------WOX13(1)       <------ZmHOX2a(2)                 <---------ARR11(3)                     <-------TEIL      --------->ARR11(3)                 --------->GLK1(2)                   <------MYB83 --------ANAC58                          --------->ARR11(3)                  <------MYB46(1) --------ANAC58                       <---------------AGL15                 --------->MYB59     ----- --------ANAC46             <---------ANAC58 ----------->GT1             --------->ATHB12       ----- --------ZAT6               <---------ANAC46<---------HSFB2a(2) --------->TOE1(3)     --------->ATHB12 >DOF2<---------ARR11(3)    <---------ANAC58--------->HSFB2a(2) --------->TOE2(3)    <---------YAB1   agcgttaagatcattcgaggtctagctatatcgtggtatacaaaatctagaaaatataaagtaaaaccatagcattgtttggttcatttgattgatgcaa  20640800                                                                                                   <-                                                                                                  <--                                                                                                <----                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                        <---------YAB1                                                                                      --------->YAB1<                       ------>ZmHOX2a(2)                                             <---------YAB1<-                      <------ZmHOX2a(2)                                   <---------ARR14(2)   ------                     --------->ARR11(3)                                   --------->ARR14(2)  <------           ---------->DOF2                                    --------->TOE2(3)    --------->YAB1<--- ---->ANAC58         <---------ARR11(3)                       <---------DAG2    <----------DOF2<----- ---->ANAC58         --------->AGP1                      <-----------GT1 <------ZmHOX2a(1)<---------ANAC58   gtcaaacaaactcgaaagaatgagatcttaataccaaaacttcaaaaacacttgatattaaacaccttatttggaggaaactcttttatgatgcttgtgg  20640900   <-------GAMYB  <---------MYB46(3) <---------ANAC46 <---------DEAR3(1) <---------RAP2.6(2) -----MYB46(1)                         <---------AHL20(2) -------DEAR3(1)                    <---------ICU4 ---GAMYB                           --------->YAB1 ------NtERF2                      --------->ICU4 -----MYB83                ----------->GT1 --->MYB55(2)              <---------ANAC46 ---AtMYB61              <---------ZAT14 -----P                  --------->ZAT14                                       ---------->DOF2  ----- ----MYB46(3)           --------->ALFIN1                            ----------->RAV1(1)        <-----   ttggcggtttttttttttgaaccagagtgttgtgaaaataatgaattgggcctgactaaaacaaattgggccacagaaaaaaaaagaattagtaagagca  20641000                                                                           <---------ICU4                                                                          <---------YAB1                                                                          --------->ICU4                                                                       --------->ICU4                                           --------->YAB1    <---------ANAC58                               <---------AGP1                <---------ANAC58                  ---------->DOF2------>ZmHOX2a(2)           <---------ANAC46<---------YAB1             --------->TOE2(3) --------->ARR14(2)            <---------ANAC55(1)   <------------CBF      ---------->DOF2    <----------DOF2  <---------YAB1 --------->ARR11(3)--------->YAB1 ------>RAV1(1) ---------->DOF2--------->ARR11(3)  --------->O2        <---------YAB1 -----ID1    --------->TOE1(3) <---------ARR14(2)  --------->ANAC46  <---------At4g35610   acaaaaaaaaaagaaccctaaagagcgcgtttggatctggttttatgaaaaccacgagagatttcgtgttgagatgattatgatgtattgaagagttttg  20641100                        --------->REM1(1)                      ----------->RAV1(1)                   --------->ANAC58                   --------->ANAC46              <-----------GT1        <------ZmHOX2a(2)          --------->CCA1(2)         <---------ARR14(2)         <---------ARR11(3)         --------->ARR14(2)                      <----------DOF2     <----   *TSS  --------->ARR11(3)         <---------ARR11(3)               <---------ANAC58   --------->ARR11(3) ---------->DOF2   --------->ANAC58 --------->ARR11(3)               <---------ANAC58 <---------YAB1   atcaaaagagagatataaacctcgcaacatcaagagaagatcgagctagaaattgacaacgtcttccaattccgagcgcttcaagacgatgattttgggg  20641200                                                            <---------ZAT18                                                            --------->ZAT18                                         ------->TEIL    <---------ANAC46                          <------ZmHOX2a(1)     --------->ANAC46  <---------TOE2(3)                 < ---GAMYB             ---------->DOF2   <---------CCA1(2)<---------bZIP60(2)                    -----   ttatagcctataatttgaagaaaaaaaaggattgaacttgttgtatctatccccaagtgatgtggactaatgttttcagaattgtaagtcttattctatc  20641300            <---------ANAC46            <---------ANAC58                --------->ICU4         --------->ETT(2)    <-----------GT1                    <---------ANAC55(2)      <------MYB83    ---------->ID1                     --------->ANAC55(2)      <------MYB46(1) <---------ANAC46 ----------DOF2                 ----------->GT1                <---------AtMYB61<---------ANAC58 ---->YAB1  <---------ANAC58--------->ATHB12<---------YAB1     --------->ALFIN1 <---------ANAC58   atctttttcccattgtgtgtgaaaattgacttattggtaatacatgatgatttttcttctacagggtggtctacataatgtttcttggtttcagtttctt  20641400                        <----------DOF2                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                    ------>ZmHOX2a(1)                          <---------MYB46(3)                --------->ARR14(2)                            <--------P               --------------                <---------ARR14(2)                <---------DAG2              ------>ZmHOX2a(1)           <---------At4g35610                 <---------TOE1(3)           ---------->ID1           --------->At4g35610        ---------->DOF2        <---------ANAC58 <---------YAB1 --------           <---------ZAT2         ----------->GT1 <----------DOF2         <-----------GT1--------->ZAT14           --------->ZAT2 <---------YAB1   <----------DOF2   <---------ANAC58--------->TOE2(3)<------   ccaagtgaaactgagctgaatcctggctttgatagaaggttaaagctttaagctttttcaatgggttgttttagtttttccttattgacattgtactaat  20641500                                                                     <----------DOF2                                                               --------------->AtSPL8                                                            --------->ARR11(3)           <---------HSFB2a(2)                                        --------->At4g35610 <---------ARR14(2)           --------->HSFB2a(2)                                   --------->At4g35610      --------->ARR14(2)       <-------GAMYB ->AtSPL8                          <---------At4g35610      <---------ARR11(3)     <---------TOE2(3) ->ICU4                            --------->ZAT2      ----------->RAV1(1)------>ZmHOX2a(1)        -- ---ICU4               <-----------GT1  <---------At4g35610<---------CCA1(2)     ------------>AtMYB77   tagtctggtcactctggagtttttttttcagttcaagagctgagcagaatgaagttgcaacatatcttgtactttcctctcatctacggttgcagaagga  20641600  Previous    Next  AGI:  At1g55325.1    Description:  similar to hypothetical protein OsI_019475 [Oryza sativa (indica cultivar-group)] (GB:EAY98242.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22087.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78881.1); contains InterPro domain TRAP240 (InterPro:IPR009401) Range:  from: 20641103    to: 20650885    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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