Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->At4g35610                                                                                          -----------                                                                                   <--------P   <----------DOF2                                                         --------->ANAC46 ---------DOF2                --------->ARR14(2)                           --------->ANAC58 ------>HSFB2a(1)             --------->GLK1(2)     <---------ARR14(2)     --------->bZIP60(2) -------HSFB2a(1)             <---------ARR14(2)    <---------GLK1(2)      --------->ANAC55(1)------- -------HSFC1(2)             <---------GLK1(2)      --------->ARR14(2)     --------->ANAC58 --------- ------>HSFC1(2)    ---------->DOF2              --------->YAB1       ----------->HVH21   <---------At4g35610 ---->ARR11(3)   --------->LBD16         --------->At4g35610 <---------ARR11(3)  --------->ATHB12 -----ARR11(3)--------->MYB52(1)         <---------At4g35610 --------->ARR11(3)  <---------MYB46(3)<-   actttcttttctcttctaccggtaaaccgaagaatctgtgagtagctgttttcatattctcaagaacttccattgacacgccatggttgatcacctgaaa  20630800                                                                                <---------GLK1(2)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                       <---------ANAC55(2)                                                                       <---------ANAC46                                                                      <---------LBD16                                                                    <------ZmHOX2a(2)           <---- >RAV1(2)                                                           ----------->HVH21     <---------ARR14(2) --->DOF2    <---------At4g35610                                    =================================HOX2a_HOX2a -->HVH21    --------->At4g35610                                   <-----------HVH21      --------->ARR14(2) --------GLK1(1)         --------->SPL7                          <---------ETT(2) <-------TEIL------>ZmHOX2a(1)   gaaaccccattcttctgcagcatcacatacggccttggagacactcttctcgtctaaatttgatatgtcgatcacgggtatggattcgtctgaatcctct  20630900                                                          <---------YAB1                                                        <----------DOF2 <---------ANAC58                                    --------->ARR11(3)                   <---------MYB52(1) <---------ANAC55(1)                                 <---------ARR11(3)     --------->ANAC58 <---------ANAC46                                <------ZmHOX2a(1)          --------->ANAC58  ------- <---------ANAC58                             <-----------RAV1(2)--------->LBD16          --------->DOF5.7(2) ------DOF2                                 <-----------HVH21  <---------LBD16  <----------DOF2  <---   tttacgtggaagttgatcagtctctcttcgaatggctgaatgtattggtcaggaagaactttgattccggtctcagacaagcctttaacaccgttacctt  20631000                                                                    <---------------AtSPL8                                                                    --------------->AtSPL8                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                  <---------ANAC46                             <---------ANAC55(2)                  <---------ANAC58                             <---------ANAC46                  <---------ANAC58                             <---------ANAC58                  <---------bZIP60(2)                          <---------ANAC55(1)             ----------->GT1                                   --------->ANAC55(2)        <----------DOF2       ---------->DOF2    <---------ANAC46  <------NtERF2 --------->ATHB12             ------->TEIL -->TOE2(3)  <------MYB83<---------LBD16  <---------DEAR3(1)   <---------ANAC58       <---------CCA1(2) ------ANAC46<------MYB46(1)     <---------TOE2(3)       <-------TEIL         ---------->DOF2<-------   cgtgtacaacaaagttggtgacttggtctcgggttaagaattgggcagcgagtgtttgattcattgcgtattggtacaaaaaaagattgtatcttttgat  20631100                         --------->ANAC58                         --------->ANAC58                                                     -------                   --------->LBD16                                                            <------                  <---------LBD16                                                             <------                 <---------LBD16                        <-----------GT1                       -------               --------->MYB52(1)                      *TSS<----------DOF2      <---------YAB1<------          --------->HSFB2a(2)                     ---------->ID1              <XXXXXXXXXXXXXXXXXXXXMIR396A          --------->HSFC1(1)                    ----------->HVH21     <---------ATHB12   --------->ALFIN1 --YAB1   <---------HSFB2a(2)                   --------->WRKY12  ------------>CBF---------->DOF2   aaaaactttcttctagataaccggggcaagccaaaacctagactaatcccttgacgtttttctttcttctcaatgagtgtttataaaagctgtggaagct  20631200                                                                 <------NtERF2                                                                ------>NtERF2                                                               --------->ATERF1(2)                                                               <---------ATERF1(2)                                                               <---------ANAC46                                                               --------->bZIP60(1)                                                               <---------bZIP60(1)                                                              --------->RAP2.6(3)                                                            ----------->HVH21                                                            ----------->TGA1                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                            ---------->DOF2             --------->ARR14(3) -->HSFB2a(1)            <---------HSFB2a(2)            <---------ARR14(3) ---HSFC1(2)             --------->HSFB2a(2)            <---------ARR11(3)            <---------ALFIN1 ---At4g35610         <---------AHL20(2)                --------->ARR11(3)           <---------REM1(2) -->HSFC1(2)         <-----------TBP                <------ZmHOX2a(1)<---------MYB111(1) ---HSFB2a(1)  ---------->DOF2      --------->ANAC46=============HOX2a_HOX2a     <-----------ARR10 <-   tcttgatacaaagactaaaaagaatttatagaaagaacacgaagaagatgaagaggaagatcgtgacggcaactacttacgaggctctacacatttgttt  20631300                                                                                      <---------TOE2(3)                                                                                     <---------LBD16                                                                              <-----------GT1                                          <---------ANAC46              --------->ANAC46        <---------MYB46(3)           --------->ATHB51                   --------->ANAC55(1)       <--------P                    <---------ICU4        <---------ETT(2)--------->ARR14(2)      <---------MYB52(1)            <---------YAB1     --------->DAG2   --------->ANAC58   <---------ANAC46                 --------->ICU4   ---------->DOF2    --------->ANAC55(2)  <---------LBD16                 --------->YAB1   <---------YAB1       --------->ANAC58<------ZmHOX2a(1) --------At4g35610           --------->ICU4  ------->TEIL  --------->ETT(2)<---------ARR14(2)   tagcttcgggttgttttgtttgaaaaatgacataattcataattgtgtatgtaatgaaaggtagacatggttgcacgtattcactattcaggatagaaaa  20631400                <---------GLK1(2)             --------->YAB1          <--------HAHB4                                                                    ---------          <---------ICU4                                                         --------->LBD16         --------->ICU4                                                         <---------HSFB2a(2)         <---------ATHB51                                                       --------->ANAC58        <---------MYB52(1)  <---------HSFB2a(2)         <---------YAB1          --------->ANAC46      ----------->GT1       --------->HSFB2a(2)      <---------YAB1             --------->ANAC58   <---------PCF2--------->GLK1(2)<------NtERF2 <----------DOF2                <---------LBD16 ------  ----------->HVH21--------->TOE2(3)         <-----------GT1               ----------->HVH21---------   tggagggaccgataattagaatctcaatttctaggcagagtgtcaattttcttttcttattcttggcattgtagaaaatgacccggaagaaaaaccttaa  20631500                  <------MYB46(1)                  <------MYB83                 <---------AtMYB61                 --------->MYB111(1)                 <---------DEAR3(1)                 --------->MYB111(2)                 --------->MYB46(2)                 <---------MYB46(3)                 --------->MYB55(2)                <--------P                                                       <----------DOF2                <---------MYB55(1)                                        <---------ANAC58               <-------GAMYB                                              <---------ANAC58              --------->ATHB12                                     <---------ANAC46   <---------TOE2(3) <---------MYB46(3)         <------MYB46(1)    <---------ANAC58                 < >TOE1(3)     --------->MYB55(2)                <------MYB83       <---------ANAC58        <---------TOE1(3) ---->DOF2    <---------MYB46(3)           <---------YAB1        <---------ARR11(3)        <---------TOE2(3) >TOE2(3)    <---------AtMYB61          <----------DOF2          --------->ARR11(3)        <---------TOE1(2)   agtttaatgaaggcgatggttggtgtttggattagattccagcttttgataggtttagcatcaacaatgtcttggttcttgttctttaagtctaaggttt  20631600                           --------->LBD16                           ------>ZmHOX2a(1)                                      <---------REM1(1)                      --------->KAN4(2)                                      <----------DOF2                    <-------TEIL                                            --------->ATHB12                 <---------MYB46(3)               ------->GAMYB           --------->GLK1(2)             --------->ATHB12                  --------->MYB52(1)         <---------ARR11(3) --------            <---------ATHB12             --------->ANAC58                <---------GLK1(2)   --------          --------->WOX13(1)             --------->ANAC46             --------->YAB1         -------- ----------DOF2 <---------TOE1(2)        --------->ANAC58       --------->YAB1  <---------ANAC46   ttcttttactatcaatctttggttcattcctgaaactgtcttcaagaaataaccgaaattgaactagaataaacagaatctttggtgtagtttgaacgca  20631700  Previous    Next  AGI:  At1g55290.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G13610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22053.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22054.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 20629788    to: 20631155    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g55300.1    Description:  TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor. similar to unnamed protein product [Vitis vinifera] (GB:CAO22061.1); contains InterPro domain TAFII55 protein conserved region; (InterPro:IPR006751) Range:  from: 20631694    to: 20633359    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version