Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->GLK1(2)                                                              --------->ARR14(2)                                                              <---------ARR14(2)              -------                                                           --------------->AGL15             --------                                                           <---------------AGL15            ---------                                      --------->LBD16     <-----------------AGL3           ----------                                     --------->HSFB2a(2)  ===========================================                 --------->CCA1(2)   <---------ANAC55(2)  ----------------->AGL3       <-------------                --------->ARR14(2)   --------->ANAC55(2)  <-----------------AGL2       --------------    =================================================================================================    --------------->AGL15            <---------ANAC46     <-----------------AGL1      <--------------    <---------------AGL15            <---------HSFB2a(2)  ----------------->AG        <--------------    ========================================================================MADS_MADS <--------------    ================================================================================================= <-----------GT1--------->ARR11(3)  <---------LBD16       <-----------------AG        <-------------- --->TEIL       <---------ARR14(2)--------->ARR14(2)      ----------------->AGL1   <---------GLK1(1) --TEIL         <---------ARR11(3)<---------ARR14(2)      ===========================================   attttgcaatttagggcagatatatagtcagaaacagttccggaataagagtcaaaaactgccaaatttggagaatttagctagggtttctcaaaaagga  20623400 ---->GT1 ---------------->ANAC81 >DAG2 >DOF2                                                      --------->ATHB12 ==MADS_MADS                                               ----------->HVH21 --AGL15                                                  <-----------HVH21        -------->P ->AGL15                                                 --------->ANAC55(2)       ------>MYB83 ===MADS_MADS                                            <---------ANAC55(2)       ------>MYB46(1) ---AGL3                 <---------ICU4            ---------->DOF2                --------->MYB55(1) ---AG                   --------->YAB1          --------->LBD16                 --------->TOE2(2) ---AGL2               --------->GLK1(2)        --------->HSFB2a(2)              --------->TOE1(2) ==MADS_MADS   ---------->DOF2                  <---------HSFB2a(2)              <---------MYB111(1) ---AGL1     --------->AHL20(2)          <---------ICU4  >>>>>>>>CAMTA3          <---------MYB59 ==MADS_MADS <---------AHL20(2)---------->DOF2 <---------LBD16<---------ANAC46<---------ARR14(2)   aacaaattgaagaaattaaaagcagaatcatgtcaaagtctaaacatttcccagaaaacgcgtgatgggtttttgtagcgaaacctaccaatggaattga  20623500                  <---------DAG2                  <----------DOF2                                     <-------GAMYB <------ZmHOX2a(2)               --------->ARR11(3)                               --------->ARR14(2) <---------ARR11(3)               <---------ARR11(3)                           <---------LBD16        --------->ARR11(3)         ----------->GT1                            <<<<<<<ZML2 <---------ARR14(2) --------->AGP1        --------->DAG2                           --------->HSFB2a(2) <---------ANAC46<-------TEIL      ---------->DOF2     <---------ATHB12       <---------HSFB2a(2) <---------MYB46(3)   gaaacgaagaaaggtaagaactttaccaatggagcttgaagacgaaaacccctagaaccatttggggattgtcgttgagaagatagatccatcttcaaaa  20623600                                        <---------ARR14(2)                                        --------->ARR14(2)                                        <---------GLK1(1)                                        --------->GLK1(1)      ----------->HVH21                                    --------->HSFB2a(2)      <---------At4g35610                                  <------ZmHOX2a(2)          --------->At4g35610                                 <---------ARR14(2)      <----------DOF2          --------->ANAC58       --------->AGP1          <---------DAG2                ------>MYB46(1)          --------->ANAC58       --------->ARR14(2)   <-----------GT1          --------->LBD16    ---     <-------TEIL           ----------->RAV1(1)    ----------->GT1   ---------->DOF2   ------>MYB83   ctcgaagttcataagaaacagaaacaaaaaccacagatcgagaattctcaagcttgtaactttatctgaccaaaagaaacccagaaaccaaatggtccaa  20623700                                             --------->ZAT14                 <------MYB46(1)                                           --------->ANAC46  --------->At5g28300                                         <---------ALFIN1  --------->ANAC58  <------MYB83                                       ------>MYB83        --------->ANAC58 --------->MYB59                                       ------>MYB46(1)     <---------ANAC55(2)                                  <---------ALFIN1         --------->ANAC46 --------->MYB111(1)            <------NtERF2        --------->MYB46(3)        --------->ANAC55(1)                      -    --------->YAB1           --------->DOF5.7(2)          <---------LBD16  <---------MYB55(1)       <   <---------ZAT6          <---------ANAC55(2)          <---------REM1(2)  <--------P              <- ------>TOE2(3)      --------->ANAC46--------->AtMYB61--------->ZAT14     <---------MYB52(1)      <--   tctcagtgatagtcggagattagacgaaaacgtgaaccaccttccacttcgctctctgaacacggaaaatgggactggtaggtctctctctctctctctt  20623800                                        <---------YAB1       <---------AHL20(2)                                      <--------HAHB4         <---------AHL20(1)                                 --------->ANAC55(2)         --------->AHL20(2)   *TSS ---------->DOF2     <---------AHL20(2)            <---------AHL20(2)     --------->GLK1(2) -------->HSFB2a(2)        --------->AHL20(2)    <---------ZAT6                 <---------GLK1(2) ---------HSFB2a(2)  <---------AtMYB61--------->YAB1    <---------YAB1     <-----------GT1 --------LBD16     <----------DOF2   <---------YAB1  <---------AHL20(2)   <---------YAB1 -------LBD16 ---------->DOF2    <---------ANAC55(2) --------->AHL20(2)<---------YAB1       <--------   ctcgggaaacaaaagtaaaagctttggtattaaatacctattattaatctagtgttttattattttattttttgttattacagaatctagagtttattga  20623900                     --------->AHL20(1)                     <---------AHL20(1)            --------->ZAT6                                                                       <---            <-----------GT1 --------->ETT(2)                          --------->ALFIN1        <------        <---------YAB1  <---------YAB1                                <---------REM1(1)       <------     <---------YAB1  --------->AHL20(2)           ----------->GT1  --------->DAG2            --------   ----------->GT1   <---------AHL20(2) <---------AHL20(2)----------->GT1   --------->ARR11(3)<------ ----CBF<---------WOX13(1)<-----------GT1--------->MYB52(1)      ---------->DOF2        <----------DOF2   atgaaatgtgattaatactatattttattatcgaccttgaaattaatggagctagtaaaatagtcaaaaaaggtgtaagatttgttttttctttggtcaa  20624000                                                                                             --------                                                                                         ----------->GT1                                                                 --------->ANAC55(2) <---------DAG2                                                        <-----------GT1              <----------DOF2                                                      --------->AHL20(2)          <-----------GT1                                                      <---------AHL20(2)      --------->AHL20(2)                                                  <---------AHL20(1)          --------->AHL20(1) ------ATHB12                                     --------->AHL20(2)          <---------AHL20(1)    - ---WRKY38(1)                                     <---------AHL20(2)          <---------AHL20(2)   <- ---WRKY45                                        --------->AHL20(1)         --------->YAB1 <-------- ->WRKY18(1)                                     XXXXXXXXXXXXXXXXXXXX>MIR860 --------->AHL20(2)  ---- ---WRKY12 <-----------GT1                       --------->AHL20(2)          <---------AHL20(2)  ----   ccatttgtaagattaacccaaaaacatactaatgtgtatttgtaaaacacattaaattaaactatatatgtaatccaaattatattacttttagttaaat  20624100          <--------HAHB4          -------->ATHB1          --------->ATHB51                      <-----------GT1          --------->AHL20(2)                --------->ATHB51         <---------ATHB12                   <---------AHL20(2)         <---------ATHB51                   <---------ICU4         --------->ICU4                     --------->AHL20(2)       --------->WOX13(1)       <---------GLK1(2)<---------At5g28300 ->AHL20(2)               --------->TOE2(3) <--------ATHB1                <-----------GT1 --------->DOF2         -------->P  <---------YAB1<---------LBD16      <---------ICU4 --------YAB1        <---------At4g35610   --------->ICU4             <---------YAB1                < -AHL20(2)<---------AHL20(2)---------->DOF2<---------YAB1  --------->ANAC58                     <---- ----->YAB1          --------->At4g35610 --------->YAB1    --------->ANAC58  <---------AtLEC2   <---- ----->AHL20(2) <---------TOE2(3) ----------->GT1--------->MYB52(1) --------->YAB1        --------->At4g35610   tataaaggtcaattatttaagggagcaacctaaagattgtgaataataatttaccggtggaaagaaacattgattatttccatgtcaatatgcgctaact  20624200                                                                              <----------DOF2                                                                        <---------YAB1                                                                      <---------ICU4                                                                      -------->HAHB4                                                                   <---------ICU4                                                                  --------->ICU4                                                                --------->ANAC46                                 <------MYB46(1)                <---------ANAC55(2)      ---------->DOF2            <------MYB83                   --------->ANAC55(2) -----------RAV1(1)             --------->MYB59                 --------->ANAC55(1)         --------- ------DOF2                 --------->ATHB12         <---------ATHB12 --------->YAB1       <---------YAB1 -----DAG2         ---------->DOF2                 --------->WOX13(1)--------->ICU4   <----------DOF2   ttttgttggaaagtggaaaacaaaagtttttgatttggtatttcaaaccatatcagtcattctaacacataattatgattctttcagacttttttcattg  20624300  Previous    Next  AGI:  At1g55270.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g55270 [Arabidopsis Thaliana] (GB:Q93W93;GB:Q9C897); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G22040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63498.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64353.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65641.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); con Range:  from: 20621621    to: 20623803    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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